RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 HTATSF1O43719 755 aaKnown RBP17.86■□□□□ 0.45
NIPAL3-203ENST00000358028 LNPKQ9C0E8 428 aa17.86■□□□□ 0.45
NIPAL3-203ENST00000358028 PTPRCP08575 1304 aa17.85■□□□□ 0.45
NIPAL3-203ENST00000358028 GSE1Q14687 1217 aa17.85■□□□□ 0.45
NIPAL3-203ENST00000358028 SIRT2Q8IXJ6 389 aa17.85■□□□□ 0.45
NIPAL3-203ENST00000358028 PCDH11XQ9BZA7 1347 aa17.85■□□□□ 0.45
NIPAL3-203ENST00000358028 PCDH11YQ9BZA8 1340 aa17.85■□□□□ 0.45
NIPAL3-203ENST00000358028 PTF1AQ7RTS3 328 aa17.84■□□□□ 0.45
NIPAL3-203ENST00000358028 TSPYL4Q9UJ04 414 aa17.84■□□□□ 0.45
NIPAL3-203ENST00000358028 RREB1Q92766 1687 aa17.84■□□□□ 0.45
NIPAL3-203ENST00000358028 CYP27B1O15528 508 aa17.84■□□□□ 0.45
NIPAL3-203ENST00000358028 PLEKHG2Q9H7P9 1386 aa17.83■□□□□ 0.44
NIPAL3-203ENST00000358028 ANKRD45Q5TZF3 282 aa17.83■□□□□ 0.44
NIPAL3-203ENST00000358028 ACSBG1Q96GR2 724 aa17.83■□□□□ 0.44
NIPAL3-203ENST00000358028 CAMKK2Q96RR4 588 aa17.83■□□□□ 0.44
NIPAL3-203ENST00000358028 MIS18AQ9NYP9 233 aa17.83■□□□□ 0.44
NIPAL3-203ENST00000358028 RGPD3A6NKT7 1758 aaPredicted RBP17.83■□□□□ 0.44
NIPAL3-203ENST00000358028 RGPD4Q7Z3J3 1758 aa17.83■□□□□ 0.44
NIPAL3-203ENST00000358028 SPG7Q9UQ90 795 aa17.82■□□□□ 0.44
NIPAL3-203ENST00000358028 KCNQ2O43526 872 aa17.81■□□□□ 0.44
NIPAL3-203ENST00000358028 EZH2Q15910 746 aaKnown RBP17.81■□□□□ 0.44
NIPAL3-203ENST00000358028 GNAT3A8MTJ3 354 aa17.81■□□□□ 0.44
NIPAL3-203ENST00000358028 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.81■□□□□ 0.44
NIPAL3-203ENST00000358028 MAP3K5Q99683 1374 aa17.8■□□□□ 0.44
NIPAL3-203ENST00000358028 NUP188Q5SRE5 1749 aa17.8■□□□□ 0.44
NIPAL3-203ENST00000358028 SCN11AQ9UI33 1791 aa17.8■□□□□ 0.44
NIPAL3-203ENST00000358028 APBA3O96018 575 aa17.8■□□□□ 0.44
NIPAL3-203ENST00000358028 MFAP1P55081 439 aaKnown RBP17.8■□□□□ 0.44
NIPAL3-203ENST00000358028 LRP5O75197 1615 aa17.8■□□□□ 0.44
NIPAL3-203ENST00000358028 ATP10DQ9P241 1426 aa17.8■□□□□ 0.44
NIPAL3-203ENST00000358028 SLC4A2P04920 1241 aa17.79■□□□□ 0.44
NIPAL3-203ENST00000358028 BMP2KLQ5H9B9 411 aa17.79■□□□□ 0.44
NIPAL3-203ENST00000358028 C22orf23Q9BZE7 217 aa17.79■□□□□ 0.44
NIPAL3-203ENST00000358028 FRAT2O75474 233 aaPredicted RBP17.79■□□□□ 0.44
NIPAL3-203ENST00000358028 BCL11BQ9C0K0 894 aaPredicted RBP17.79■□□□□ 0.44
NIPAL3-203ENST00000358028 ANTXR1Q9H6X2 564 aa17.79■□□□□ 0.44
NIPAL3-203ENST00000358028 PHKG2P15735 406 aa17.78■□□□□ 0.44
NIPAL3-203ENST00000358028 PLEKHO1Q53GL0 409 aaPredicted RBP17.78■□□□□ 0.44
NIPAL3-203ENST00000358028 ANKRD44Q8N8A2 993 aa17.78■□□□□ 0.44
NIPAL3-203ENST00000358028 TBC1D2Q9BYX2 928 aa17.78■□□□□ 0.44
NIPAL3-203ENST00000358028 ZNF530Q6P9A1 599 aaPredicted RBP17.77■□□□□ 0.44
NIPAL3-203ENST00000358028 PSDA5PKW4 1024 aaPredicted RBP17.76■□□□□ 0.43
NIPAL3-203ENST00000358028 AMOTQ4VCS5 1084 aa17.76■□□□□ 0.43
NIPAL3-203ENST00000358028 RPAP2Q8IXW5 612 aaPredicted RBP17.76■□□□□ 0.43
NIPAL3-203ENST00000358028 IFNL2Q8IZJ0 200 aa17.76■□□□□ 0.43
NIPAL3-203ENST00000358028 DCTPP1Q9H773 170 aa17.76■□□□□ 0.43
NIPAL3-203ENST00000358028 SYTL4Q96C24 671 aaPredicted RBP17.76■□□□□ 0.43
NIPAL3-203ENST00000358028 BABAM1Q9NWV8 329 aa17.76■□□□□ 0.43
NIPAL3-203ENST00000358028 LY75O60449 1722 aa17.75■□□□□ 0.43
NIPAL3-203ENST00000358028 KDM6AO15550 1401 aaPredicted RBP17.75■□□□□ 0.43
NIPAL3-203ENST00000358028 SOS1Q07889 1333 aaPredicted RBP17.75■□□□□ 0.43
NIPAL3-203ENST00000358028 EIF5BO60841 1220 aaKnown RBP17.75■□□□□ 0.43
NIPAL3-203ENST00000358028 PRIM1P49642 420 aaKnown RBP17.75■□□□□ 0.43
NIPAL3-203ENST00000358028 NKX1-1Q15270 411 aaPredicted RBP17.75■□□□□ 0.43
NIPAL3-203ENST00000358028 G2E3Q7L622 706 aa17.75■□□□□ 0.43
NIPAL3-203ENST00000358028 ADAMTS7Q9UKP4 1686 aa17.75■□□□□ 0.43
NIPAL3-203ENST00000358028 CEP85Q6P2H3 762 aa17.74■□□□□ 0.43
NIPAL3-203ENST00000358028 IL17REQ8NFR9 667 aa17.74■□□□□ 0.43
NIPAL3-203ENST00000358028 STK31Q9BXU1 1019 aa17.74■□□□□ 0.43
NIPAL3-203ENST00000358028 RBM25P49756 843 aaKnown RBP17.74■□□□□ 0.43
NIPAL3-203ENST00000358028 MEIS3Q99687 375 aa17.74■□□□□ 0.43
NIPAL3-203ENST00000358028 N4BP2Q86UW6 1770 aaPredicted RBP17.73■□□□□ 0.43
NIPAL3-203ENST00000358028 CACNA1FO60840 1977 aa17.73■□□□□ 0.43
NIPAL3-203ENST00000358028 CCT4P50991 539 aaKnown RBP17.73■□□□□ 0.43
NIPAL3-203ENST00000358028 R3HDM1Q15032 1099 aaKnown RBP17.73■□□□□ 0.43
NIPAL3-203ENST00000358028 TAF7Q15545 349 aaPredicted RBP17.72■□□□□ 0.43
NIPAL3-203ENST00000358028 CCDC30Q5VVM6 783 aa17.72■□□□□ 0.43
NIPAL3-203ENST00000358028 PLSCR1O15162 318 aa17.71■□□□□ 0.43
NIPAL3-203ENST00000358028 C1orf141Q5JVX7 400 aa17.71■□□□□ 0.43
NIPAL3-203ENST00000358028 F6X3S4 739 aa17.7■□□□□ 0.42
NIPAL3-203ENST00000358028 AKAP4Q5JQC9 854 aa17.7■□□□□ 0.42
NIPAL3-203ENST00000358028 SLC4A10Q6U841 1118 aa17.7■□□□□ 0.42
NIPAL3-203ENST00000358028 MPRIPQ6WCQ1 1025 aa17.7■□□□□ 0.42
NIPAL3-203ENST00000358028 PLEKHM2Q8IWE5 1019 aa17.7■□□□□ 0.42
NIPAL3-203ENST00000358028 SLKQ9H2G2 1235 aaPredicted RBP17.7■□□□□ 0.42
NIPAL3-203ENST00000358028 SIPA1L3O60292 1781 aaPredicted RBP17.7■□□□□ 0.42
NIPAL3-203ENST00000358028 KDM3BQ7LBC6 1761 aa17.7■□□□□ 0.42
NIPAL3-203ENST00000358028 SNX21Q969T3 373 aa17.69■□□□□ 0.42
NIPAL3-203ENST00000358028 DCAF5Q96JK2 942 aa17.69■□□□□ 0.42
NIPAL3-203ENST00000358028 CEMIPQ8WUJ3 1361 aa17.69■□□□□ 0.42
NIPAL3-203ENST00000358028 HSP90AB1P08238 724 aaKnown RBP17.68■□□□□ 0.42
NIPAL3-203ENST00000358028 FLIIQ13045 1269 aa17.68■□□□□ 0.42
NIPAL3-203ENST00000358028 CDC45O75419 566 aa17.68■□□□□ 0.42
NIPAL3-203ENST00000358028 TBC1D9Q6ZT07 1266 aa17.68■□□□□ 0.42
NIPAL3-203ENST00000358028 HSCBQ8IWL3 235 aa17.68■□□□□ 0.42
NIPAL3-203ENST00000358028 CHMP5Q9NZZ3 219 aa17.68■□□□□ 0.42
NIPAL3-203ENST00000358028 MRC1P22897 1456 aa17.68■□□□□ 0.42
NIPAL3-203ENST00000358028 TAF1LQ8IZX4 1826 aa17.67■□□□□ 0.42
NIPAL3-203ENST00000358028 PXDNLA1KZ92 1463 aa17.67■□□□□ 0.42
NIPAL3-203ENST00000358028 HMMRO75330 724 aa17.67■□□□□ 0.42
NIPAL3-203ENST00000358028 PROM2Q8N271 834 aa17.67■□□□□ 0.42
NIPAL3-203ENST00000358028 PIGBQ92521 554 aa17.67■□□□□ 0.42
NIPAL3-203ENST00000358028 PAPPAQ13219 1627 aa17.67■□□□□ 0.42
NIPAL3-203ENST00000358028 GSPT1P15170 499 aaKnown RBP17.66■□□□□ 0.42
NIPAL3-203ENST00000358028 TTC22Q5TAA0 569 aa17.66■□□□□ 0.42
NIPAL3-203ENST00000358028 FKBP5Q13451 457 aaPredicted RBP17.66■□□□□ 0.42
NIPAL3-203ENST00000358028 NECTIN2Q92692 538 aa17.66■□□□□ 0.42
NIPAL3-203ENST00000358028 LGR6Q9HBX8 967 aa17.66■□□□□ 0.42
NIPAL3-203ENST00000358028 TMOD3Q9NYL9 352 aa17.66■□□□□ 0.42
NIPAL3-203ENST00000358028 C5P01031 1676 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms