RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 CCT4P50991 539 aaKnown RBP12.2□□□□□ -0.46
FXR1-202ENST00000357559 BOLA2Q9H3K6 86 aa12.2□□□□□ -0.46
FXR1-202ENST00000357559 RNF216Q9NWF9 866 aaPredicted RBP12.2□□□□□ -0.46
FXR1-202ENST00000357559 CEP126Q9P2H0 1117 aa12.2□□□□□ -0.46
FXR1-202ENST00000357559 SH3BP5O60239 455 aa12.2□□□□□ -0.46
FXR1-202ENST00000357559 GTF2F1P35269 517 aaKnown RBP eCLIP12.2□□□□□ -0.46
FXR1-202ENST00000357559 CKAP2LQ8IYA6 745 aa12.2□□□□□ -0.46
FXR1-202ENST00000357559 GCC1Q96CN9 775 aa12.2□□□□□ -0.46
FXR1-202ENST00000357559 SRCIN1Q9C0H9 1055 aa12.2□□□□□ -0.46
FXR1-202ENST00000357559 SMARCA2P51531 1590 aa12.2□□□□□ -0.46
FXR1-202ENST00000357559 C16orf45Q96MC5 204 aaPredicted RBP12.2□□□□□ -0.46
FXR1-202ENST00000357559 CAVIN4Q5BKX8 364 aa12.2□□□□□ -0.46
FXR1-202ENST00000357559 ZNF444Q8N0Y2 327 aaPredicted RBP12.2□□□□□ -0.46
FXR1-202ENST00000357559 CHD1LQ86WJ1 897 aa12.2□□□□□ -0.46
FXR1-202ENST00000357559 IKBKGQ9Y6K9 419 aa12.2□□□□□ -0.46
FXR1-202ENST00000357559 AKNAQ7Z591 1439 aa12.2□□□□□ -0.46
FXR1-202ENST00000357559 MTIF2P46199 727 aaKnown RBP12.2□□□□□ -0.46
FXR1-202ENST00000357559 FEZ1Q99689 392 aa12.2□□□□□ -0.46
FXR1-202ENST00000357559 CLIP2Q9UDT6 1046 aa12.2□□□□□ -0.46
FXR1-202ENST00000357559 SFPQP23246 707 aaKnown RBP eCLIP12.19□□□□□ -0.46
FXR1-202ENST00000357559 NLRP5P59047 1200 aa12.19□□□□□ -0.46
FXR1-202ENST00000357559 CFAP57Q96MR6 1250 aa12.19□□□□□ -0.46
FXR1-202ENST00000357559 JADE2Q9NQC1 790 aa12.19□□□□□ -0.46
FXR1-202ENST00000357559 CCDC88BA6NC98 1476 aa12.19□□□□□ -0.46
FXR1-202ENST00000357559 WDHD1O75717 1129 aaPredicted RBP12.19□□□□□ -0.46
FXR1-202ENST00000357559 CCDC63Q8NA47 563 aa12.19□□□□□ -0.46
FXR1-202ENST00000357559 NAPBQ9H115 298 aa12.19□□□□□ -0.46
FXR1-202ENST00000357559 CTNNA3Q9UI47 895 aa12.19□□□□□ -0.46
FXR1-202ENST00000357559 EXOC6BQ9Y2D4 811 aa12.19□□□□□ -0.46
FXR1-202ENST00000357559 PRPF40BQ6NWY9 871 aaKnown RBP12.19□□□□□ -0.46
FXR1-202ENST00000357559 CGNQ9P2M7 1197 aaKnown RBP12.19□□□□□ -0.46
FXR1-202ENST00000357559 ZC3H6P61129 1189 aaKnown RBP12.18□□□□□ -0.46
FXR1-202ENST00000357559 TMEM266Q2M3C6 531 aa12.18□□□□□ -0.46
FXR1-202ENST00000357559 RPGRQ92834 1020 aaKnown RBP12.18□□□□□ -0.46
FXR1-202ENST00000357559 HSP90AA4PQ58FG1 418 aa12.18□□□□□ -0.46
FXR1-202ENST00000357559 CDK19Q9BWU1 502 aa12.18□□□□□ -0.46
FXR1-202ENST00000357559 TAOK3Q9H2K8 898 aa12.18□□□□□ -0.46
FXR1-202ENST00000357559 CNNM3Q8NE01 707 aa12.18□□□□□ -0.46
FXR1-202ENST00000357559 FAM212AQ96EL1 285 aa12.18□□□□□ -0.46
FXR1-202ENST00000357559 BAZ1AQ9NRL2 1556 aaPredicted RBP12.18□□□□□ -0.46
FXR1-202ENST00000357559 SSRP1Q08945 709 aaKnown RBP12.17□□□□□ -0.46
FXR1-202ENST00000357559 SLC12A7Q9Y666 1083 aa12.17□□□□□ -0.46
FXR1-202ENST00000357559 PAFAH1B1P43034 410 aa12.17□□□□□ -0.46
FXR1-202ENST00000357559 CCDC40Q4G0X9 1142 aa12.17□□□□□ -0.46
FXR1-202ENST00000357559 AKNAD1Q5T1N1 836 aa12.17□□□□□ -0.46
FXR1-202ENST00000357559 PROCA1Q8NCQ7 364 aaPredicted RBP12.17□□□□□ -0.46
FXR1-202ENST00000357559 RRBP1Q9P2E9 1410 aaKnown RBP12.17□□□□□ -0.46
FXR1-202ENST00000357559 USO1O60763 962 aaKnown RBP12.17□□□□□ -0.46
FXR1-202ENST00000357559 TMC6Q7Z403 805 aa12.17□□□□□ -0.46
FXR1-202ENST00000357559 MYD88Q99836 296 aa12.17□□□□□ -0.46
FXR1-202ENST00000357559 ATP2B3Q16720 1220 aa12.17□□□□□ -0.46
FXR1-202ENST00000357559 ADAMTS2O95450 1211 aa12.17□□□□□ -0.46
FXR1-202ENST00000357559 ZSCAN12O43309 604 aa12.16□□□□□ -0.46
FXR1-202ENST00000357559 C8orf76Q96K31 380 aa12.16□□□□□ -0.46
FXR1-202ENST00000357559 WIZO95785 1651 aa12.16□□□□□ -0.46
FXR1-202ENST00000357559 MPRIPQ6WCQ1 1025 aa12.16□□□□□ -0.46
FXR1-202ENST00000357559 ZNF287Q9HBT7 754 aa12.16□□□□□ -0.46
FXR1-202ENST00000357559 PRDM11Q9NQV5 511 aa12.16□□□□□ -0.46
FXR1-202ENST00000357559 ZHX1Q9UKY1 873 aaPredicted RBP12.16□□□□□ -0.46
FXR1-202ENST00000357559 USHBP1Q8N6Y0 703 aa12.16□□□□□ -0.46
FXR1-202ENST00000357559 PDS5BQ9NTI5 1447 aa12.16□□□□□ -0.46
FXR1-202ENST00000357559 KIF18AQ8NI77 898 aa12.16□□□□□ -0.46
FXR1-202ENST00000357559 ARHGAP5Q13017 1502 aa12.16□□□□□ -0.46
FXR1-202ENST00000357559 FBF1Q8TES7 1133 aa12.16□□□□□ -0.46
FXR1-202ENST00000357559 GBP3Q9H0R5 595 aa12.16□□□□□ -0.46
FXR1-202ENST00000357559 SMIM23A6NLE4 172 aa12.15□□□□□ -0.46
FXR1-202ENST00000357559 TPD52P55327 224 aaPredicted RBP12.15□□□□□ -0.46
FXR1-202ENST00000357559 CCDC6Q16204 474 aa12.15□□□□□ -0.46
FXR1-202ENST00000357559 MICALCLQ6ZW33 695 aa12.15□□□□□ -0.46
FXR1-202ENST00000357559 NDC80O14777 642 aa12.15□□□□□ -0.46
FXR1-202ENST00000357559 IDEP14735 1019 aa12.15□□□□□ -0.46
FXR1-202ENST00000357559 NAP1L3Q99457 506 aaPredicted RBP12.15□□□□□ -0.46
FXR1-202ENST00000357559 DAAM2Q86T65 1068 aa12.15□□□□□ -0.46
FXR1-202ENST00000357559 PPP6R1Q9UPN7 881 aa12.15□□□□□ -0.46
FXR1-202ENST00000357559 C6orf163Q5TEZ5 329 aa12.15□□□□□ -0.46
FXR1-202ENST00000357559 ALS2CR12Q96Q35 445 aa12.15□□□□□ -0.46
FXR1-202ENST00000357559 FGFR1OPO95684 399 aaKnown RBP12.15□□□□□ -0.46
FXR1-202ENST00000357559 PLS1Q14651 629 aa12.15□□□□□ -0.46
FXR1-202ENST00000357559 ODF2LQ9ULJ1 636 aa12.15□□□□□ -0.46
FXR1-202ENST00000357559 GOLGA8BA8MQT2 603 aa12.14□□□□□ -0.47
FXR1-202ENST00000357559 CTCFLQ8NI51 663 aaPredicted RBP12.14□□□□□ -0.47
FXR1-202ENST00000357559 TTC36A6NLP5 189 aa12.14□□□□□ -0.47
FXR1-202ENST00000357559 YEATS4O95619 227 aa12.14□□□□□ -0.47
FXR1-202ENST00000357559 U3KPZ7 1027 aaPredicted RBP12.14□□□□□ -0.47
FXR1-202ENST00000357559 CABP1Q9NZU7 370 aa12.14□□□□□ -0.47
FXR1-202ENST00000357559 STARD3NLO95772 234 aa12.14□□□□□ -0.47
FXR1-202ENST00000357559 LRSAM1Q6UWE0 723 aa12.14□□□□□ -0.47
FXR1-202ENST00000357559 GSTA5Q7RTV2 222 aa12.14□□□□□ -0.47
FXR1-202ENST00000357559 CCDC8Q9H0W5 538 aaPredicted RBP12.14□□□□□ -0.47
FXR1-202ENST00000357559 GDPD2Q9HCC8 539 aa12.14□□□□□ -0.47
FXR1-202ENST00000357559 SMARCC1Q92922 1105 aaPredicted RBP12.14□□□□□ -0.47
FXR1-202ENST00000357559 SIRT1Q96EB6 747 aa12.14□□□□□ -0.47
FXR1-202ENST00000357559 CCDC194A0A1B0GVG4 234 aa12.14□□□□□ -0.47
FXR1-202ENST00000357559 IFIT1P09914 478 aaKnown RBP12.14□□□□□ -0.47
FXR1-202ENST00000357559 BAG4O95429 457 aaKnown RBP12.13□□□□□ -0.47
FXR1-202ENST00000357559 GPTP24298 496 aa12.13□□□□□ -0.47
FXR1-202ENST00000357559 C6orf229H3BNL8 230 aa12.13□□□□□ -0.47
FXR1-202ENST00000357559 IFIT3O14879 490 aaKnown RBP12.13□□□□□ -0.47
FXR1-202ENST00000357559 MCM3P25205 808 aa12.13□□□□□ -0.47
FXR1-202ENST00000357559 ARID5AQ03989 594 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms