RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 TNMDQ9H2S6 317 aa8.15□□□□□ -1.1
RTN4-203ENST00000357376 PA2G4Q9UQ80 394 aaKnown RBP8.15□□□□□ -1.1
RTN4-203ENST00000357376 ADGRB3O60242 1522 aa8.15□□□□□ -1.1
RTN4-203ENST00000357376 ABCC3O15438 1527 aa8.15□□□□□ -1.11
RTN4-203ENST00000357376 GADD45BO75293 160 aaPredicted RBP8.15□□□□□ -1.11
RTN4-203ENST00000357376 MAP7D2Q96T17 732 aa8.15□□□□□ -1.11
RTN4-203ENST00000357376 TFIP11Q9UBB9 837 aaKnown RBP8.15□□□□□ -1.11
RTN4-203ENST00000357376 NLRP1Q9C000 1473 aa8.15□□□□□ -1.11
RTN4-203ENST00000357376 PIK3R4Q99570 1358 aa8.15□□□□□ -1.11
RTN4-203ENST00000357376 PPFIA3O75145 1194 aa8.14□□□□□ -1.11
RTN4-203ENST00000357376 PDCP20941 246 aa8.14□□□□□ -1.11
RTN4-203ENST00000357376 AK2P54819 239 aa8.14□□□□□ -1.11
RTN4-203ENST00000357376 ERC1Q8IUD2 1116 aa8.14□□□□□ -1.11
RTN4-203ENST00000357376 RAPGEF4Q8WZA2 1011 aa8.14□□□□□ -1.11
RTN4-203ENST00000357376 PDCL3Q9H2J4 239 aa8.14□□□□□ -1.11
RTN4-203ENST00000357376 PPRC1Q5VV67 1664 aaKnown RBP8.14□□□□□ -1.11
RTN4-203ENST00000357376 ZSCAN22P10073 491 aaPredicted RBP8.14□□□□□ -1.11
RTN4-203ENST00000357376 ANAPC15P60006 121 aa8.14□□□□□ -1.11
RTN4-203ENST00000357376 SPATA32Q96LK8 384 aa8.14□□□□□ -1.11
RTN4-203ENST00000357376 NUP62CLQ9H1M0 184 aa8.14□□□□□ -1.11
RTN4-203ENST00000357376 PRDM10Q9NQV6 1147 aa8.14□□□□□ -1.11
RTN4-203ENST00000357376 KDM4AO75164 1064 aa8.14□□□□□ -1.11
RTN4-203ENST00000357376 DNM1Q05193 864 aaKnown RBP8.14□□□□□ -1.11
RTN4-203ENST00000357376 JARID2Q92833 1246 aaPredicted RBP8.14□□□□□ -1.11
RTN4-203ENST00000357376 ZMYND15Q9H091 742 aa8.14□□□□□ -1.11
RTN4-203ENST00000357376 KIF3AQ9Y496 699 aa8.14□□□□□ -1.11
RTN4-203ENST00000357376 METP08581 1390 aa8.14□□□□□ -1.11
RTN4-203ENST00000357376 MLH3Q9UHC1 1453 aa8.14□□□□□ -1.11
RTN4-203ENST00000357376 UNC5CLQ8IV45 518 aa8.14□□□□□ -1.11
RTN4-203ENST00000357376 ECHDC1Q9NTX5 307 aa8.14□□□□□ -1.11
RTN4-203ENST00000357376 NSFL1CQ9UNZ2 370 aaKnown RBP8.14□□□□□ -1.11
RTN4-203ENST00000357376 MAP3K2Q9Y2U5 619 aa8.14□□□□□ -1.11
RTN4-203ENST00000357376 SOS1Q07889 1333 aaPredicted RBP8.13□□□□□ -1.11
RTN4-203ENST00000357376 PTCH1Q13635 1447 aa8.13□□□□□ -1.11
RTN4-203ENST00000357376 HMGN5P82970 282 aaKnown RBP8.13□□□□□ -1.11
RTN4-203ENST00000357376 FLT4P35916 1363 aa8.13□□□□□ -1.11
RTN4-203ENST00000357376 LRRC7Q96NW7 1537 aa8.13□□□□□ -1.11
RTN4-203ENST00000357376 CCDC73Q6ZRK6 1079 aa8.13□□□□□ -1.11
RTN4-203ENST00000357376 ZSCAN31Q96LW9 406 aaPredicted RBP8.13□□□□□ -1.11
RTN4-203ENST00000357376 UBE2HP62256 183 aa8.13□□□□□ -1.11
RTN4-203ENST00000357376 MAP3K11Q16584 847 aa8.13□□□□□ -1.11
RTN4-203ENST00000357376 C17orf53Q8N3J3 647 aaPredicted RBP8.13□□□□□ -1.11
RTN4-203ENST00000357376 NOL7Q9UMY1 257 aaKnown RBP8.13□□□□□ -1.11
RTN4-203ENST00000357376 FAM177BA6PVY3 158 aa8.12□□□□□ -1.11
RTN4-203ENST00000357376 HIP1O00291 1037 aa8.12□□□□□ -1.11
RTN4-203ENST00000357376 NBPF7P0C2Y1 421 aaPredicted RBP8.12□□□□□ -1.11
RTN4-203ENST00000357376 SYT1P21579 422 aa8.12□□□□□ -1.11
RTN4-203ENST00000357376 FMNL2Q96PY5 1086 aa8.12□□□□□ -1.11
RTN4-203ENST00000357376 PPP1R9BQ96SB3 815 aa8.12□□□□□ -1.11
RTN4-203ENST00000357376 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.12□□□□□ -1.118e-9■■■□□ 15.2
RTN4-203ENST00000357376 ARAP3Q8WWN8 1544 aa8.12□□□□□ -1.11
RTN4-203ENST00000357376 CWF19L2Q2TBE0 894 aaKnown RBP8.12□□□□□ -1.11
RTN4-203ENST00000357376 MYOM1P52179 1685 aa8.12□□□□□ -1.11
RTN4-203ENST00000357376 SETBP1Q9Y6X0 1596 aa8.12□□□□□ -1.11
RTN4-203ENST00000357376 PNPLA6Q8IY17 1366 aa8.12□□□□□ -1.11
RTN4-203ENST00000357376 TNRQ92752 1358 aa8.12□□□□□ -1.11
RTN4-203ENST00000357376 PRR36Q9H6K5 1346 aa8.12□□□□□ -1.11
RTN4-203ENST00000357376 BRD1O95696 1058 aa8.12□□□□□ -1.11
RTN4-203ENST00000357376 ZC3H6P61129 1189 aaKnown RBP8.12□□□□□ -1.11
RTN4-203ENST00000357376 TPD52L1Q16890 204 aaPredicted RBP8.12□□□□□ -1.11
RTN4-203ENST00000357376 MTERF4Q7Z6M4 381 aaKnown RBP8.12□□□□□ -1.11
RTN4-203ENST00000357376 THEMISQ8N1K5 641 aaPredicted RBP8.12□□□□□ -1.11
RTN4-203ENST00000357376 LRRC59Q96AG4 307 aaKnown RBP8.12□□□□□ -1.11
RTN4-203ENST00000357376 INTS4Q96HW7 963 aaKnown RBP8.12□□□□□ -1.11
RTN4-203ENST00000357376 SDF4Q9BRK5 362 aa8.12□□□□□ -1.11
RTN4-203ENST00000357376 DBF4Q9UBU7 674 aaPredicted RBP8.12□□□□□ -1.11
RTN4-203ENST00000357376 F13A1P00488 732 aa8.11□□□□□ -1.11
RTN4-203ENST00000357376 FAM173BQ6P4H8 233 aa8.11□□□□□ -1.11
RTN4-203ENST00000357376 TOMM22Q9NS69 142 aa8.11□□□□□ -1.11
RTN4-203ENST00000357376 PPP6R1Q9UPN7 881 aa8.11□□□□□ -1.11
RTN4-203ENST00000357376 CPLX1O14810 134 aa8.11□□□□□ -1.11
RTN4-203ENST00000357376 WASHC4Q2M389 1173 aa8.11□□□□□ -1.11
RTN4-203ENST00000357376 USP44Q9H0E7 712 aa8.11□□□□□ -1.11
RTN4-203ENST00000357376 KIAA0232Q92628 1395 aa8.11□□□□□ -1.11
RTN4-203ENST00000357376 NPHP1O15259 732 aa8.11□□□□□ -1.11
RTN4-203ENST00000357376 MCM5P33992 734 aa8.11□□□□□ -1.11
RTN4-203ENST00000357376 SH2B1Q9NRF2 756 aaPredicted RBP8.11□□□□□ -1.11
RTN4-203ENST00000357376 RBM8AQ9Y5S9 174 aaKnown RBP8.11□□□□□ -1.11
RTN4-203ENST00000357376 SNX14Q9Y5W7 946 aa8.11□□□□□ -1.11
RTN4-203ENST00000357376 INO80Q9ULG1 1556 aaPredicted RBP8.11□□□□□ -1.11
RTN4-203ENST00000357376 TPM4P67936 248 aa8.1□□□□□ -1.11
RTN4-203ENST00000357376 ANKRD1Q15327 319 aa8.1□□□□□ -1.11
RTN4-203ENST00000357376 FILIP1Q7Z7B0 1213 aa8.1□□□□□ -1.11
RTN4-203ENST00000357376 PHF8Q9UPP1 1060 aa8.1□□□□□ -1.11
RTN4-203ENST00000357376 KIF24Q5T7B8 1368 aa8.1□□□□□ -1.11
RTN4-203ENST00000357376 ADGRB1O14514 1584 aa8.1□□□□□ -1.11
RTN4-203ENST00000357376 HECW2Q9P2P5 1572 aa8.1□□□□□ -1.11
RTN4-203ENST00000357376 TTC21AQ8NDW8 1320 aa8.1□□□□□ -1.11
RTN4-203ENST00000357376 KINO60870 393 aaKnown RBP8.1□□□□□ -1.11
RTN4-203ENST00000357376 HOXC9P31274 260 aa8.1□□□□□ -1.11
RTN4-203ENST00000357376 ME1P48163 572 aa8.1□□□□□ -1.11
RTN4-203ENST00000357376 PIP4K2AP48426 406 aaPredicted RBP8.1□□□□□ -1.11
RTN4-203ENST00000357376 GUCY1B3Q02153 619 aa8.1□□□□□ -1.11
RTN4-203ENST00000357376 HS1BP3Q53T59 392 aa8.1□□□□□ -1.11
RTN4-203ENST00000357376 EVI5LQ96CN4 794 aa8.1□□□□□ -1.11
RTN4-203ENST00000357376 MYD88Q99836 296 aa8.1□□□□□ -1.11
RTN4-203ENST00000357376 LRRC2Q9BYS8 371 aa8.1□□□□□ -1.11
RTN4-203ENST00000357376 APPP05067 770 aa8.1□□□□□ -1.11
RTN4-203ENST00000357376 NOLC1Q14978 699 aaKnown RBP eCLIP8.1□□□□□ -1.118e-8■□□□□ 10
RTN4-203ENST00000357376 LGR6Q9HBX8 967 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms