RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 SIRT1Q96EB6 747 aa14.57□□□□□ -0.08
SMARCAL1-201ENST00000357276 SETD1BQ9UPS6 1966 aaKnown RBP14.57□□□□□ -0.08
SMARCAL1-201ENST00000357276 FEZ1Q99689 392 aa14.57□□□□□ -0.08
SMARCAL1-201ENST00000357276 ANO2Q9NQ90 1003 aa14.56□□□□□ -0.08
SMARCAL1-201ENST00000357276 CCT4P50991 539 aaKnown RBP14.56□□□□□ -0.08
SMARCAL1-201ENST00000357276 UPF3BQ9BZI7 483 aaKnown RBP14.56□□□□□ -0.08
SMARCAL1-201ENST00000357276 IL25Q9H293 177 aa14.56□□□□□ -0.08
SMARCAL1-201ENST00000357276 FAM208AQ9UK61 1670 aaKnown RBP14.55□□□□□ -0.08
SMARCAL1-201ENST00000357276 TSHZ3Q63HK5 1081 aa14.55□□□□□ -0.08
SMARCAL1-201ENST00000357276 LRRCC1Q9C099 1032 aa14.55□□□□□ -0.08
SMARCAL1-201ENST00000357276 ZBTB7CA1YPR0 619 aa14.54□□□□□ -0.08
SMARCAL1-201ENST00000357276 F13A1P00488 732 aa14.54□□□□□ -0.08
SMARCAL1-201ENST00000357276 FOXD4L6Q3SYB3 417 aaPredicted RBP14.54□□□□□ -0.08
SMARCAL1-201ENST00000357276 FOXD4L3Q6VB84 417 aaPredicted RBP14.54□□□□□ -0.08
SMARCAL1-201ENST00000357276 NOL8Q76FK4 1167 aaKnown RBP14.54□□□□□ -0.08
SMARCAL1-201ENST00000357276 NME9Q86XW9 330 aa14.54□□□□□ -0.08
SMARCAL1-201ENST00000357276 UNC5CLQ8IV45 518 aa14.54□□□□□ -0.08
SMARCAL1-201ENST00000357276 STX6O43752 255 aa14.54□□□□□ -0.08
SMARCAL1-201ENST00000357276 SYT1P21579 422 aa14.54□□□□□ -0.08
SMARCAL1-201ENST00000357276 EXOC6BQ9Y2D4 811 aa14.54□□□□□ -0.08
SMARCAL1-201ENST00000357276 GNAI2P04899 355 aa14.53□□□□□ -0.08
SMARCAL1-201ENST00000357276 SLC4A2P04920 1241 aa14.53□□□□□ -0.08
SMARCAL1-201ENST00000357276 U2AF2P26368 475 aaKnown RBP eCLIP14.53□□□□□ -0.082e-6■■■■□ 20.2
SMARCAL1-201ENST00000357276 RAD50Q92878 1312 aa14.53□□□□□ -0.08
SMARCAL1-201ENST00000357276 CACNA1FO60840 1977 aa14.53□□□□□ -0.08
SMARCAL1-201ENST00000357276 ADAMTS13Q76LX8 1427 aa14.53□□□□□ -0.08
SMARCAL1-201ENST00000357276 NCBP1Q09161 790 aaKnown RBP14.53□□□□□ -0.08
SMARCAL1-201ENST00000357276 ZRANB1Q9UGI0 708 aa14.53□□□□□ -0.08
SMARCAL1-201ENST00000357276 CHD2O14647 1828 aaKnown RBP14.52□□□□□ -0.08
SMARCAL1-201ENST00000357276 CHAF1AQ13111 956 aaPredicted RBP14.52□□□□□ -0.08
SMARCAL1-201ENST00000357276 GIMAP6Q6P9H5 292 aa14.52□□□□□ -0.08
SMARCAL1-201ENST00000357276 OGFRQ9NZT2 677 aa14.52□□□□□ -0.08
SMARCAL1-201ENST00000357276 SPDYE4A6NLX3 237 aa14.52□□□□□ -0.09
SMARCAL1-201ENST00000357276 ATP8B2P98198 1209 aa14.52□□□□□ -0.09
SMARCAL1-201ENST00000357276 G2E3Q7L622 706 aa14.52□□□□□ -0.09
SMARCAL1-201ENST00000357276 NALCNQ8IZF0 1738 aa14.52□□□□□ -0.09
SMARCAL1-201ENST00000357276 RUFY3Q7L099 469 aa14.51□□□□□ -0.09
SMARCAL1-201ENST00000357276 ATP6V1DQ9Y5K8 247 aa14.51□□□□□ -0.09
SMARCAL1-201ENST00000357276 SNX14Q9Y5W7 946 aa14.51□□□□□ -0.09
SMARCAL1-201ENST00000357276 PEAK1Q9H792 1746 aa14.51□□□□□ -0.09
SMARCAL1-201ENST00000357276 LRRC37A3O60309 1634 aa14.51□□□□□ -0.09
SMARCAL1-201ENST00000357276 PNMA6EA0A0J9YXQ4 647 aa14.51□□□□□ -0.09
SMARCAL1-201ENST00000357276 CTNNA3Q9UI47 895 aa14.51□□□□□ -0.09
SMARCAL1-201ENST00000357276 GOLGA6L6A8MZA4 724 aa14.5□□□□□ -0.09
SMARCAL1-201ENST00000357276 AEBP1Q8IUX7 1158 aa14.5□□□□□ -0.09
SMARCAL1-201ENST00000357276 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.5□□□□□ -0.09
SMARCAL1-201ENST00000357276 RRS1Q15050 365 aaKnown RBP14.5□□□□□ -0.09
SMARCAL1-201ENST00000357276 MCM10Q7L590 875 aa14.5□□□□□ -0.09
SMARCAL1-201ENST00000357276 RILPL2Q969X0 211 aa14.5□□□□□ -0.09
SMARCAL1-201ENST00000357276 LIMCH1Q9UPQ0 1083 aa14.5□□□□□ -0.09
SMARCAL1-201ENST00000357276 SGSM2O43147 1006 aa14.49□□□□□ -0.09
SMARCAL1-201ENST00000357276 AK2P54819 239 aa14.49□□□□□ -0.09
SMARCAL1-201ENST00000357276 TAF3Q5VWG9 929 aa14.49□□□□□ -0.09
SMARCAL1-201ENST00000357276 LSG1Q9H089 658 aaKnown RBP14.49□□□□□ -0.09
SMARCAL1-201ENST00000357276 PXDNLA1KZ92 1463 aa14.49□□□□□ -0.09
SMARCAL1-201ENST00000357276 TRIM6-TRIM34B2RNG4 842 aa14.49□□□□□ -0.09
SMARCAL1-201ENST00000357276 F6X3S4 739 aa14.49□□□□□ -0.09
SMARCAL1-201ENST00000357276 THEMISQ8N1K5 641 aaPredicted RBP14.49□□□□□ -0.09
SMARCAL1-201ENST00000357276 MTMR6Q9Y217 621 aa14.49□□□□□ -0.09
SMARCAL1-201ENST00000357276 GABPB1Q06547 395 aaPredicted RBP14.49□□□□□ -0.09
SMARCAL1-201ENST00000357276 EIF4A2Q14240 407 aaKnown RBP14.49□□□□□ -0.09
SMARCAL1-201ENST00000357276 SMTNL1A8MU46 457 aa14.48□□□□□ -0.09
SMARCAL1-201ENST00000357276 FAM200AQ8TCP9 573 aa14.48□□□□□ -0.09
SMARCAL1-201ENST00000357276 COG3Q96JB2 828 aa14.48□□□□□ -0.09
SMARCAL1-201ENST00000357276 CCDC192P0DO97 292 aa14.48□□□□□ -0.09
SMARCAL1-201ENST00000357276 DDX41Q9UJV9 622 aaKnown RBP14.48□□□□□ -0.09
SMARCAL1-201ENST00000357276 FIBPO43427 364 aa14.47□□□□□ -0.09
SMARCAL1-201ENST00000357276 GNAI3P08754 354 aa14.47□□□□□ -0.09
SMARCAL1-201ENST00000357276 CEBPAP49715 358 aaPredicted RBP14.47□□□□□ -0.09
SMARCAL1-201ENST00000357276 RASEFQ8IZ41 740 aa14.47□□□□□ -0.09
SMARCAL1-201ENST00000357276 PI4K2BQ8TCG2 481 aa14.47□□□□□ -0.09
SMARCAL1-201ENST00000357276 HYPKQ9NX55 129 aa14.47□□□□□ -0.09
SMARCAL1-201ENST00000357276 PTGS1P23219 599 aa14.47□□□□□ -0.09
SMARCAL1-201ENST00000357276 FGD1P98174 961 aa14.47□□□□□ -0.09
SMARCAL1-201ENST00000357276 DNM1Q05193 864 aaKnown RBP14.47□□□□□ -0.09
SMARCAL1-201ENST00000357276 SULT6B1Q6IMI4 303 aa14.47□□□□□ -0.09
SMARCAL1-201ENST00000357276 WAPLQ7Z5K2 1190 aa14.47□□□□□ -0.09
SMARCAL1-201ENST00000357276 MRVI1Q9Y6F6 885 aa14.47□□□□□ -0.09
SMARCAL1-201ENST00000357276 MORC2Q9Y6X9 1032 aaPredicted RBP14.47□□□□□ -0.09
SMARCAL1-201ENST00000357276 METP08581 1390 aa14.47□□□□□ -0.09
SMARCAL1-201ENST00000357276 ELP1O95163 1332 aa14.46□□□□□ -0.09
SMARCAL1-201ENST00000357276 RBM43Q6ZSC3 357 aaKnown RBP14.46□□□□□ -0.09
SMARCAL1-201ENST00000357276 CCDC171Q6TFL3 1326 aa14.46□□□□□ -0.09
SMARCAL1-201ENST00000357276 A0A0U1RQG5 324 aaPredicted RBP14.46□□□□□ -0.09
SMARCAL1-201ENST00000357276 WASLO00401 505 aaPredicted RBP14.46□□□□□ -0.09
SMARCAL1-201ENST00000357276 PLA2G4DQ86XP0 818 aa14.46□□□□□ -0.09
SMARCAL1-201ENST00000357276 SPC24Q8NBT2 197 aa14.46□□□□□ -0.09
SMARCAL1-201ENST00000357276 KCNB2Q92953 911 aa14.46□□□□□ -0.09
SMARCAL1-201ENST00000357276 FAM53CQ9NYF3 392 aa14.46□□□□□ -0.09
SMARCAL1-201ENST00000357276 SMC3Q9UQE7 1217 aa14.46□□□□□ -0.09
SMARCAL1-201ENST00000357276 EID1Q9Y6B2 187 aa14.46□□□□□ -0.09
SMARCAL1-201ENST00000357276 LARGE1O95461 756 aa14.46□□□□□ -0.1
SMARCAL1-201ENST00000357276 SLC4A10Q6U841 1118 aa14.46□□□□□ -0.1
SMARCAL1-201ENST00000357276 FMN2Q9NZ56 1722 aa14.45□□□□□ -0.1
SMARCAL1-201ENST00000357276 SOS1Q07889 1333 aaPredicted RBP14.45□□□□□ -0.1
SMARCAL1-201ENST00000357276 ST3GAL1Q11201 340 aa14.45□□□□□ -0.1
SMARCAL1-201ENST00000357276 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.45□□□□□ -0.1
SMARCAL1-201ENST00000357276 RTF1Q92541 710 aaKnown RBP14.45□□□□□ -0.1
SMARCAL1-201ENST00000357276 SLFN14P0C7P3 912 aa14.45□□□□□ -0.1
SMARCAL1-201ENST00000357276 SSH3Q8TE77 659 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms