RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 MX1P20591 662 aa18.64■□□□□ 0.58
RXRA-201ENST00000356384 HOOK3Q86VS8 718 aa18.64■□□□□ 0.58
RXRA-201ENST00000356384 C8orf76Q96K31 380 aa18.64■□□□□ 0.57
RXRA-201ENST00000356384 DNAI2Q9GZS0 605 aa18.64■□□□□ 0.57
RXRA-201ENST00000356384 BOLA2Q9H3K6 86 aa18.64■□□□□ 0.57
RXRA-201ENST00000356384 MIS18AQ9NYP9 233 aa18.64■□□□□ 0.57
RXRA-201ENST00000356384 GCOM1H8Y6P7 765 aaPredicted RBP18.64■□□□□ 0.57
RXRA-201ENST00000356384 MYZAPP0CAP1 466 aa18.64■□□□□ 0.57
RXRA-201ENST00000356384 MCM3P25205 808 aa18.64■□□□□ 0.57
RXRA-201ENST00000356384 PAFAH1B1P43034 410 aa18.64■□□□□ 0.57
RXRA-201ENST00000356384 CEP63Q96MT8 703 aa18.64■□□□□ 0.57
RXRA-201ENST00000356384 TRMT1Q9NXH9 659 aaKnown RBP18.64■□□□□ 0.57
RXRA-201ENST00000356384 KIF1BPQ96EK5 621 aa18.63■□□□□ 0.57
RXRA-201ENST00000356384 SCAND2PQ9GZW5 306 aaPredicted RBP18.63■□□□□ 0.57
RXRA-201ENST00000356384 PCF11O94913 1555 aaKnown RBP18.63■□□□□ 0.57
RXRA-201ENST00000356384 USO1O60763 962 aaKnown RBP18.63■□□□□ 0.57
RXRA-201ENST00000356384 SPECC1Q5M775 1068 aa18.63■□□□□ 0.57
RXRA-201ENST00000356384 NAPBQ9H115 298 aa18.63■□□□□ 0.57
RXRA-201ENST00000356384 GLRX3O76003 335 aaKnown RBP18.62■□□□□ 0.57
RXRA-201ENST00000356384 AKAP2Q9Y2D5 859 aa18.62■□□□□ 0.57
RXRA-201ENST00000356384 ANKRD30BQ9BXX2 1392 aa18.62■□□□□ 0.57
RXRA-201ENST00000356384 CTCFLQ8NI51 663 aaPredicted RBP18.62■□□□□ 0.57
RXRA-201ENST00000356384 RAPGEF3O95398 923 aa18.62■□□□□ 0.57
RXRA-201ENST00000356384 CKAP2LQ8IYA6 745 aa18.62■□□□□ 0.57
RXRA-201ENST00000356384 TRERF1Q96PN7 1200 aa18.62■□□□□ 0.57
RXRA-201ENST00000356384 CTNNA2P26232 953 aa18.61■□□□□ 0.57
RXRA-201ENST00000356384 CCDC196A0A1B0GTZ2 297 aa18.61■□□□□ 0.57
RXRA-201ENST00000356384 CCDC96Q2M329 555 aa18.61■□□□□ 0.57
RXRA-201ENST00000356384 CAVIN4Q5BKX8 364 aa18.61■□□□□ 0.57
RXRA-201ENST00000356384 RTEL1-TNFRSF6BF6WH68 1400 aa18.61■□□□□ 0.57
RXRA-201ENST00000356384 RANBP6O60518 1105 aaKnown RBP18.61■□□□□ 0.57
RXRA-201ENST00000356384 YEATS4O95619 227 aa18.61■□□□□ 0.57
RXRA-201ENST00000356384 FGFR1OPO95684 399 aaKnown RBP18.61■□□□□ 0.57
RXRA-201ENST00000356384 IFIT1P09914 478 aaKnown RBP18.61■□□□□ 0.57
RXRA-201ENST00000356384 LIG1P18858 919 aa18.61■□□□□ 0.57
RXRA-201ENST00000356384 HLTFQ14527 1009 aaKnown RBP eCLIP18.61■□□□□ 0.57
RXRA-201ENST00000356384 PHAXQ9H814 394 aaKnown RBP18.6■□□□□ 0.57
RXRA-201ENST00000356384 CNNM3Q8NE01 707 aa18.6■□□□□ 0.57
RXRA-201ENST00000356384 GNAT3A8MTJ3 354 aa18.6■□□□□ 0.57
RXRA-201ENST00000356384 STARD3NLO95772 234 aa18.6■□□□□ 0.57
RXRA-201ENST00000356384 TMEM266Q2M3C6 531 aa18.6■□□□□ 0.57
RXRA-201ENST00000356384 RAB34Q9BZG1 259 aa18.6■□□□□ 0.57
RXRA-201ENST00000356384 SLC12A7Q9Y666 1083 aa18.59■□□□□ 0.57
RXRA-201ENST00000356384 GRIN2AQ12879 1464 aa18.59■□□□□ 0.57
RXRA-201ENST00000356384 CCDC175P0C221 793 aa18.59■□□□□ 0.57
RXRA-201ENST00000356384 CCDC150Q8NCX0 1101 aa18.59■□□□□ 0.57
RXRA-201ENST00000356384 C16orf45Q96MC5 204 aaPredicted RBP18.59■□□□□ 0.57
RXRA-201ENST00000356384 TMCO5BA8MYB1 307 aa18.59■□□□□ 0.57
RXRA-201ENST00000356384 RAB11FIP3O75154 756 aa18.59■□□□□ 0.57
RXRA-201ENST00000356384 FCHSD2O94868 740 aa18.59■□□□□ 0.57
RXRA-201ENST00000356384 PRKCSHP14314 528 aaPredicted RBP18.59■□□□□ 0.57
RXRA-201ENST00000356384 NFE2L2Q16236 605 aa18.59■□□□□ 0.57
RXRA-201ENST00000356384 MICALCLQ6ZW33 695 aa18.59■□□□□ 0.57
RXRA-201ENST00000356384 CGNQ9P2M7 1197 aaKnown RBP18.59■□□□□ 0.57
RXRA-201ENST00000356384 USP25Q9UHP3 1055 aa18.59■□□□□ 0.57
RXRA-201ENST00000356384 COMMD10Q9Y6G5 202 aa18.59■□□□□ 0.57
RXRA-201ENST00000356384 DUSP27Q5VZP5 1158 aa18.59■□□□□ 0.57
RXRA-201ENST00000356384 SPTY2D1Q68D10 685 aaPredicted RBP18.58■□□□□ 0.57
RXRA-201ENST00000356384 ANKLE2Q86XL3 938 aa18.58■□□□□ 0.57
RXRA-201ENST00000356384 DZIP1Q86YF9 867 aaKnown RBP18.58■□□□□ 0.57
RXRA-201ENST00000356384 TROQ12816 1431 aaPredicted RBP18.58■□□□□ 0.56
RXRA-201ENST00000356384 SH2B1Q9NRF2 756 aaPredicted RBP18.58■□□□□ 0.56
RXRA-201ENST00000356384 MYD88Q99836 296 aa18.58■□□□□ 0.56
RXRA-201ENST00000356384 CCDC194A0A1B0GVG4 234 aa18.57■□□□□ 0.56
RXRA-201ENST00000356384 PTCD1O75127 700 aaKnown RBP18.57■□□□□ 0.56
RXRA-201ENST00000356384 MTIF2P46199 727 aaKnown RBP18.57■□□□□ 0.56
RXRA-201ENST00000356384 NLRP5P59047 1200 aa18.57■□□□□ 0.56
RXRA-201ENST00000356384 ZNF444Q8N0Y2 327 aaPredicted RBP18.57■□□□□ 0.56
RXRA-201ENST00000356384 SMARCC1Q92922 1105 aaPredicted RBP18.57■□□□□ 0.56
RXRA-201ENST00000356384 CUL5Q93034 780 aa18.57■□□□□ 0.56
RXRA-201ENST00000356384 THUMPD2Q9BTF0 503 aaKnown RBP18.57■□□□□ 0.56
RXRA-201ENST00000356384 EPRSP07814 1512 aaKnown RBP18.57■□□□□ 0.56
RXRA-201ENST00000356384 SSRP1Q08945 709 aaKnown RBP18.57■□□□□ 0.56
RXRA-201ENST00000356384 MCM10Q7L590 875 aa18.57■□□□□ 0.56
RXRA-201ENST00000356384 PRPF4BQ13523 1007 aaKnown RBP18.57■□□□□ 0.56
RXRA-201ENST00000356384 SUPT6HQ7KZ85 1726 aaKnown RBP18.57■□□□□ 0.56
RXRA-201ENST00000356384 BIN1O00499 593 aa18.57■□□□□ 0.56
RXRA-201ENST00000356384 TMPOP42166 694 aaKnown RBP18.56■□□□□ 0.56
RXRA-201ENST00000356384 IQCA1Q86XH1 822 aa18.56■□□□□ 0.56
RXRA-201ENST00000356384 FSIP1Q8NA03 581 aa18.56■□□□□ 0.56
RXRA-201ENST00000356384 PSMD1Q99460 953 aa18.56■□□□□ 0.56
RXRA-201ENST00000356384 TAOK3Q9H2K8 898 aa18.56■□□□□ 0.56
RXRA-201ENST00000356384 ANKIB1Q9P2G1 1089 aa18.56■□□□□ 0.56
RXRA-201ENST00000356384 GTF2F1P35269 517 aaKnown RBP eCLIP18.56■□□□□ 0.56
RXRA-201ENST00000356384 WDR78Q5VTH9 848 aa18.56■□□□□ 0.56
RXRA-201ENST00000356384 TMC6Q7Z403 805 aa18.56■□□□□ 0.56
RXRA-201ENST00000356384 ALS2CR12Q96Q35 445 aa18.56■□□□□ 0.56
RXRA-201ENST00000356384 CCDC8Q9H0W5 538 aaPredicted RBP18.56■□□□□ 0.56
RXRA-201ENST00000356384 GOLGA8AA7E2F4 631 aa18.56■□□□□ 0.56
RXRA-201ENST00000356384 GOLGA8BA8MQT2 603 aa18.56■□□□□ 0.56
RXRA-201ENST00000356384 CCT2P78371 535 aaKnown RBP18.56■□□□□ 0.56
RXRA-201ENST00000356384 TRMT1LQ7Z2T5 733 aaKnown RBP18.56■□□□□ 0.56
RXRA-201ENST00000356384 ZNF213O14771 459 aa18.56■□□□□ 0.56
RXRA-201ENST00000356384 KIF20AO95235 890 aa18.56■□□□□ 0.56
RXRA-201ENST00000356384 SSFA2P28290 1259 aa18.56■□□□□ 0.56
RXRA-201ENST00000356384 TCERG1LQ5VWI1 586 aa18.56■□□□□ 0.56
RXRA-201ENST00000356384 LARP6Q9BRS8 491 aaKnown RBP18.56■□□□□ 0.56
RXRA-201ENST00000356384 CTAGE5O15320 804 aa18.55■□□□□ 0.56
RXRA-201ENST00000356384 MAP3K12Q12852 859 aa18.55■□□□□ 0.56
RXRA-201ENST00000356384 PPM1EQ8WY54 764 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms