RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 CEP57L1Q8IYX8 460 aa13.23□□□□□ -0.29
FN1-204ENST00000356005 PHAXQ9H814 394 aaKnown RBP13.23□□□□□ -0.29
FN1-204ENST00000356005 MINDY4BA8MYZ0 360 aa13.22□□□□□ -0.29
FN1-204ENST00000356005 NEBLO76041 1014 aa13.22□□□□□ -0.29
FN1-204ENST00000356005 DEKP35659 375 aaKnown RBP13.22□□□□□ -0.29
FN1-204ENST00000356005 CCDC96Q2M329 555 aa13.22□□□□□ -0.29
FN1-204ENST00000356005 RTCBQ9Y3I0 505 aaKnown RBP13.22□□□□□ -0.29
FN1-204ENST00000356005 C1orf115Q9H7X2 142 aa13.22□□□□□ -0.29
FN1-204ENST00000356005 ABCC2Q92887 1545 aa13.22□□□□□ -0.29
FN1-204ENST00000356005 KIF5BP33176 963 aa13.22□□□□□ -0.29
FN1-204ENST00000356005 ZNF592Q92610 1267 aa13.22□□□□□ -0.29
FN1-204ENST00000356005 ACEP12821 1306 aa13.21□□□□□ -0.29
FN1-204ENST00000356005 NLRP3Q96P20 1036 aa13.21□□□□□ -0.29
FN1-204ENST00000356005 CLEC11AQ9Y240 323 aa13.21□□□□□ -0.29
FN1-204ENST00000356005 CCDC85AQ96PX6 553 aaPredicted RBP13.21□□□□□ -0.29
FN1-204ENST00000356005 C14orf93Q9H972 538 aaKnown RBP13.21□□□□□ -0.29
FN1-204ENST00000356005 ARGLU1Q9NWB6 273 aaPredicted RBP13.21□□□□□ -0.29
FN1-204ENST00000356005 FGFR1OPO95684 399 aaKnown RBP13.21□□□□□ -0.3
FN1-204ENST00000356005 TEX35Q5T0J7 233 aa13.21□□□□□ -0.3
FN1-204ENST00000356005 CATIPQ7Z7H3 387 aa13.21□□□□□ -0.3
FN1-204ENST00000356005 ANKRD36BQ8N2N9 1353 aa13.21□□□□□ -0.3
FN1-204ENST00000356005 TMEM266Q2M3C6 531 aa13.21□□□□□ -0.3
FN1-204ENST00000356005 CCDC178Q5BJE1 867 aa13.21□□□□□ -0.3
FN1-204ENST00000356005 WDR33Q9C0J8 1336 aaKnown RBP13.2□□□□□ -0.3
FN1-204ENST00000356005 KRT85P78386 507 aa13.2□□□□□ -0.3
FN1-204ENST00000356005 CHD1LQ86WJ1 897 aa13.2□□□□□ -0.3
FN1-204ENST00000356005 JDP2Q8WYK2 163 aa13.2□□□□□ -0.3
FN1-204ENST00000356005 SPINK5Q9NQ38 1064 aaPredicted RBP13.2□□□□□ -0.3
FN1-204ENST00000356005 KDM4AO75164 1064 aa13.2□□□□□ -0.3
FN1-204ENST00000356005 ME1P48163 572 aa13.2□□□□□ -0.3
FN1-204ENST00000356005 RTN4Q9NQC3 1192 aaKnown RBP13.2□□□□□ -0.3
FN1-204ENST00000356005 MCM10Q7L590 875 aa13.2□□□□□ -0.3
FN1-204ENST00000356005 ERCC4Q92889 916 aaPredicted RBP13.2□□□□□ -0.3
FN1-204ENST00000356005 DEF6Q9H4E7 631 aa13.2□□□□□ -0.3
FN1-204ENST00000356005 ABCC1P33527 1531 aa13.2□□□□□ -0.3
FN1-204ENST00000356005 BAG4O95429 457 aaKnown RBP13.19□□□□□ -0.3
FN1-204ENST00000356005 DNAAF4Q8WXU2 420 aa13.19□□□□□ -0.3
FN1-204ENST00000356005 MYCNP04198 464 aaPredicted RBP13.19□□□□□ -0.3
FN1-204ENST00000356005 NME9Q86XW9 330 aa13.19□□□□□ -0.3
FN1-204ENST00000356005 ATP10AO60312 1499 aa13.19□□□□□ -0.3
FN1-204ENST00000356005 IL2RBP14784 551 aa13.19□□□□□ -0.3
FN1-204ENST00000356005 TANGO6Q9C0B7 1094 aa13.19□□□□□ -0.3
FN1-204ENST00000356005 PPIP5K1Q6PFW1 1433 aa13.19□□□□□ -0.3
FN1-204ENST00000356005 PIK3R4Q99570 1358 aa13.19□□□□□ -0.3
FN1-204ENST00000356005 BCAR3O75815 825 aa13.19□□□□□ -0.3
FN1-204ENST00000356005 SSBP05455 408 aaKnown RBP eCLIP13.19□□□□□ -0.3
FN1-204ENST00000356005 CETN2P41208 172 aa13.19□□□□□ -0.3
FN1-204ENST00000356005 CWC27Q6UX04 472 aaKnown RBP13.19□□□□□ -0.3
FN1-204ENST00000356005 USHBP1Q8N6Y0 703 aa13.19□□□□□ -0.3
FN1-204ENST00000356005 ZNF213O14771 459 aa13.18□□□□□ -0.3
FN1-204ENST00000356005 NKTRP30414 1462 aaKnown RBP13.18□□□□□ -0.3
FN1-204ENST00000356005 RALGAPBQ86X10 1494 aa13.18□□□□□ -0.3
FN1-204ENST00000356005 PPFIBP1Q86W92 1011 aa13.18□□□□□ -0.3
FN1-204ENST00000356005 TFCP2L1Q9NZI6 479 aa13.18□□□□□ -0.3
FN1-204ENST00000356005 ZNF804AQ7Z570 1209 aa13.18□□□□□ -0.3
FN1-204ENST00000356005 LDHAL6AQ6ZMR3 332 aa13.18□□□□□ -0.3
FN1-204ENST00000356005 MNS1Q8NEH6 495 aa13.18□□□□□ -0.3
FN1-204ENST00000356005 KIF20AO95235 890 aa13.17□□□□□ -0.3
FN1-204ENST00000356005 DCTN1Q14203 1278 aa13.17□□□□□ -0.3
FN1-204ENST00000356005 LARP1BQ659C4 914 aaKnown RBP13.17□□□□□ -0.3
FN1-204ENST00000356005 CRNKL1Q9BZJ0 848 aaKnown RBP13.17□□□□□ -0.3
FN1-204ENST00000356005 AK9Q5TCS8 1911 aa13.17□□□□□ -0.3
FN1-204ENST00000356005 TPTE2Q6XPS3 522 aa13.17□□□□□ -0.3
FN1-204ENST00000356005 CCDC39Q9UFE4 941 aa13.17□□□□□ -0.3
FN1-204ENST00000356005 GPTP24298 496 aa13.17□□□□□ -0.3
FN1-204ENST00000356005 ZNF397Q8NF99 534 aaPredicted RBP13.17□□□□□ -0.3
FN1-204ENST00000356005 ZNF219Q9P2Y4 722 aaPredicted RBP13.17□□□□□ -0.3
FN1-204ENST00000356005 ZMYM3Q14202 1370 aa13.17□□□□□ -0.3
FN1-204ENST00000356005 UQCRFS1P1P0C7P4 283 aa13.17□□□□□ -0.3
FN1-204ENST00000356005 CBFA2T2O43439 604 aa13.17□□□□□ -0.3
FN1-204ENST00000356005 HSP90AA2PQ14568 343 aaPredicted RBP13.17□□□□□ -0.3
FN1-204ENST00000356005 PDRG1Q9NUG6 133 aa13.17□□□□□ -0.3
FN1-204ENST00000356005 MAST1Q9Y2H9 1570 aa13.16□□□□□ -0.3
FN1-204ENST00000356005 STXBP4Q6ZWJ1 553 aa13.16□□□□□ -0.3
FN1-204ENST00000356005 RPRD2Q5VT52 1461 aaKnown RBP13.16□□□□□ -0.3
FN1-204ENST00000356005 TNNI2P48788 182 aa13.16□□□□□ -0.3
FN1-204ENST00000356005 HSP90B2PQ58FF3 399 aa13.16□□□□□ -0.3
FN1-204ENST00000356005 EYA3Q99504 573 aa13.16□□□□□ -0.3
FN1-204ENST00000356005 ASXL1Q8IXJ9 1541 aa13.16□□□□□ -0.3
FN1-204ENST00000356005 BRPF1P55201 1214 aaPredicted RBP13.16□□□□□ -0.3
FN1-204ENST00000356005 STK32BQ9NY57 414 aa13.16□□□□□ -0.3
FN1-204ENST00000356005 RANBP6O60518 1105 aaKnown RBP13.16□□□□□ -0.3
FN1-204ENST00000356005 TSG101Q99816 390 aa13.16□□□□□ -0.3
FN1-204ENST00000356005 KDM5AP29375 1690 aaKnown RBP13.15□□□□□ -0.3
FN1-204ENST00000356005 SEPT7Q16181 437 aaKnown RBP13.15□□□□□ -0.3
FN1-204ENST00000356005 PLCG2P16885 1265 aa13.15□□□□□ -0.3
FN1-204ENST00000356005 CHMP4BP1P59074 171 aa13.15□□□□□ -0.3
FN1-204ENST00000356005 SLC12A7Q9Y666 1083 aa13.15□□□□□ -0.3
FN1-204ENST00000356005 ADGRF5Q8IZF2 1346 aa13.15□□□□□ -0.3
FN1-204ENST00000356005 MIS18AQ9NYP9 233 aa13.15□□□□□ -0.3
FN1-204ENST00000356005 PDZRN3Q9UPQ7 1066 aa13.15□□□□□ -0.3
FN1-204ENST00000356005 MAP3K2Q9Y2U5 619 aa13.15□□□□□ -0.3
FN1-204ENST00000356005 MAP4K4O95819 1239 aaPredicted RBP13.15□□□□□ -0.3
FN1-204ENST00000356005 IL27Q8NEV9 243 aa13.15□□□□□ -0.3
FN1-204ENST00000356005 STK3Q13188 491 aa13.15□□□□□ -0.3
FN1-204ENST00000356005 PYM1Q9BRP8 204 aaKnown RBP13.15□□□□□ -0.3
FN1-204ENST00000356005 NUP160Q12769 1436 aa13.15□□□□□ -0.31
FN1-204ENST00000356005 BEGAINQ9BUH8 593 aa13.14□□□□□ -0.31
FN1-204ENST00000356005 SERPINC1P01008 464 aa13.14□□□□□ -0.31
FN1-204ENST00000356005 JAKMIP1Q96N16 626 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms