RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 GJD4Q96KN9 370 aaPredicted RBP17.26■□□□□ 0.35
HOXA1-202ENST00000355633 TRPC5Q9UL62 973 aaPredicted RBP17.26■□□□□ 0.35
HOXA1-202ENST00000355633 ATRNO75882 1429 aa17.26■□□□□ 0.35
HOXA1-202ENST00000355633 SYTL4Q96C24 671 aaPredicted RBP17.25■□□□□ 0.35
HOXA1-202ENST00000355633 THSD7AQ9UPZ6 1657 aa17.25■□□□□ 0.35
HOXA1-202ENST00000355633 F6X3S4 739 aa17.25■□□□□ 0.35
HOXA1-202ENST00000355633 ZBTB7BO15156 539 aaPredicted RBP17.25■□□□□ 0.35
HOXA1-202ENST00000355633 ANXA1P04083 346 aa17.25■□□□□ 0.35
HOXA1-202ENST00000355633 DDX21Q9NR30 783 aaKnown RBP eCLIP17.25■□□□□ 0.35
HOXA1-202ENST00000355633 ZBTB40Q9NUA8 1239 aa17.25■□□□□ 0.35
HOXA1-202ENST00000355633 USP16Q9Y5T5 823 aa17.25■□□□□ 0.35
HOXA1-202ENST00000355633 PTCD1O75127 700 aaKnown RBP17.24■□□□□ 0.35
HOXA1-202ENST00000355633 PRIM1P49642 420 aaKnown RBP17.24■□□□□ 0.35
HOXA1-202ENST00000355633 SLC4A10Q6U841 1118 aa17.24■□□□□ 0.35
HOXA1-202ENST00000355633 HYPKQ9NX55 129 aa17.24■□□□□ 0.35
HOXA1-202ENST00000355633 ASAP1Q9ULH1 1129 aa17.24■□□□□ 0.35
HOXA1-202ENST00000355633 PROSER3Q2NL68 480 aa17.23■□□□□ 0.35
HOXA1-202ENST00000355633 ATG3Q9NT62 314 aa17.23■□□□□ 0.35
HOXA1-202ENST00000355633 PCDHB15Q9Y5E8 787 aa17.23■□□□□ 0.35
HOXA1-202ENST00000355633 KDM2BQ8NHM5 1336 aa17.23■□□□□ 0.35
HOXA1-202ENST00000355633 CCT4P50991 539 aaKnown RBP17.23■□□□□ 0.35
HOXA1-202ENST00000355633 CENPQQ7L2Z9 268 aaPredicted RBP17.23■□□□□ 0.35
HOXA1-202ENST00000355633 PDIA6Q15084 440 aa17.22■□□□□ 0.35
HOXA1-202ENST00000355633 PXDNLA1KZ92 1463 aa17.22■□□□□ 0.35
HOXA1-202ENST00000355633 ACSBG1Q96GR2 724 aa17.21■□□□□ 0.35
HOXA1-202ENST00000355633 N4BP2Q86UW6 1770 aaPredicted RBP17.21■□□□□ 0.35
HOXA1-202ENST00000355633 IGHDP01880 384 aa17.2■□□□□ 0.34
HOXA1-202ENST00000355633 MYL6BP14649 208 aa17.2■□□□□ 0.34
HOXA1-202ENST00000355633 VSIG10Q8N0Z9 540 aa17.2■□□□□ 0.34
HOXA1-202ENST00000355633 QTRT2Q9H974 415 aaKnown RBP17.2■□□□□ 0.34
HOXA1-202ENST00000355633 ERBB4Q15303 1308 aa17.19■□□□□ 0.34
HOXA1-202ENST00000355633 PI4KAP2A4QPH2 592 aa17.19■□□□□ 0.34
HOXA1-202ENST00000355633 PI4KAP1Q8N8J0 262 aa17.19■□□□□ 0.34
HOXA1-202ENST00000355633 RBM42Q9BTD8 480 aaKnown RBP17.19■□□□□ 0.34
HOXA1-202ENST00000355633 ONECUT3O60422 494 aaPredicted RBP17.18■□□□□ 0.34
HOXA1-202ENST00000355633 DNAAF4Q8WXU2 420 aa17.18■□□□□ 0.34
HOXA1-202ENST00000355633 TEX13AQ9BXU3 409 aaPredicted RBP17.18■□□□□ 0.34
HOXA1-202ENST00000355633 ADCY9O60503 1353 aa17.18■□□□□ 0.34
HOXA1-202ENST00000355633 DDX58O95786 925 aaKnown RBP17.18■□□□□ 0.34
HOXA1-202ENST00000355633 RWDD1Q9H446 243 aaPredicted RBP17.18■□□□□ 0.34
HOXA1-202ENST00000355633 AIMP1Q12904 312 aaKnown RBP17.17■□□□□ 0.34
HOXA1-202ENST00000355633 KSR2Q6VAB6 950 aa17.17■□□□□ 0.34
HOXA1-202ENST00000355633 PIP4K2AP48426 406 aaPredicted RBP17.16■□□□□ 0.34
HOXA1-202ENST00000355633 LRP10Q7Z4F1 713 aa17.16■□□□□ 0.34
HOXA1-202ENST00000355633 C1orf115Q9H7X2 142 aa17.16■□□□□ 0.34
HOXA1-202ENST00000355633 XAGE3Q8WTP9 111 aa17.16■□□□□ 0.34
HOXA1-202ENST00000355633 MEIS3Q99687 375 aa17.16■□□□□ 0.34
HOXA1-202ENST00000355633 MAP3K2Q9Y2U5 619 aa17.16■□□□□ 0.34
HOXA1-202ENST00000355633 HDAC1Q13547 482 aaPredicted RBP17.15■□□□□ 0.34
HOXA1-202ENST00000355633 COPS6Q7L5N1 327 aa17.15■□□□□ 0.34
HOXA1-202ENST00000355633 DNAJC10Q8IXB1 793 aa17.15■□□□□ 0.34
HOXA1-202ENST00000355633 SEPT12Q8IYM1 358 aa17.15■□□□□ 0.34
HOXA1-202ENST00000355633 SRCIN1Q9C0H9 1055 aa17.15■□□□□ 0.34
HOXA1-202ENST00000355633 ATP10DQ9P241 1426 aa17.15■□□□□ 0.34
HOXA1-202ENST00000355633 A1BGP04217 495 aa17.14■□□□□ 0.34
HOXA1-202ENST00000355633 NBPF26B4DH59 902 aa17.14■□□□□ 0.33
HOXA1-202ENST00000355633 KCNQ2O43526 872 aa17.14■□□□□ 0.33
HOXA1-202ENST00000355633 STARD3NLO95772 234 aa17.14■□□□□ 0.33
HOXA1-202ENST00000355633 BEND3Q5T5X7 828 aa17.14■□□□□ 0.33
HOXA1-202ENST00000355633 NBPF14Q5TI25 921 aa17.14■□□□□ 0.33
HOXA1-202ENST00000355633 NBPF10Q6P3W6 841 aaKnown RBP17.14■□□□□ 0.33
HOXA1-202ENST00000355633 NBPF15Q8N660 670 aa17.14■□□□□ 0.33
HOXA1-202ENST00000355633 ZNF772Q68DY9 489 aaPredicted RBP17.13■□□□□ 0.33
HOXA1-202ENST00000355633 RIC3Q7Z5B4 369 aa17.13■□□□□ 0.33
HOXA1-202ENST00000355633 SLC4A9Q96Q91 983 aa17.13■□□□□ 0.33
HOXA1-202ENST00000355633 GNAI3P08754 354 aa17.13■□□□□ 0.33
HOXA1-202ENST00000355633 TJP1Q07157 1748 aa17.13■□□□□ 0.33
HOXA1-202ENST00000355633 FBXO41Q8TF61 875 aa17.13■□□□□ 0.33
HOXA1-202ENST00000355633 SMARCC1Q92922 1105 aaPredicted RBP17.12■□□□□ 0.33
HOXA1-202ENST00000355633 NHSQ6T4R5 1651 aa17.11■□□□□ 0.33
HOXA1-202ENST00000355633 ANKRD13DQ6ZTN6 518 aa17.11■□□□□ 0.33
HOXA1-202ENST00000355633 PALLDQ8WX93 1383 aa17.11■□□□□ 0.33
HOXA1-202ENST00000355633 FAM182BQ5T319 152 aa17.11■□□□□ 0.33
HOXA1-202ENST00000355633 ALDH1L1O75891 902 aa17.1■□□□□ 0.33
HOXA1-202ENST00000355633 CYP19A1P11511 503 aaPredicted RBP17.1■□□□□ 0.33
HOXA1-202ENST00000355633 USP44Q9H0E7 712 aa17.1■□□□□ 0.33
HOXA1-202ENST00000355633 ARFGEF2Q9Y6D5 1785 aa17.1■□□□□ 0.33
HOXA1-202ENST00000355633 LOC102724428A0A0B4J2F2 783 aa17.09■□□□□ 0.33
HOXA1-202ENST00000355633 GNAI2P04899 355 aa17.09■□□□□ 0.33
HOXA1-202ENST00000355633 SIK1P57059 783 aa17.09■□□□□ 0.33
HOXA1-202ENST00000355633 LINS1Q8NG48 757 aa17.09■□□□□ 0.33
HOXA1-202ENST00000355633 PLBD2Q8NHP8 589 aa17.09■□□□□ 0.33
HOXA1-202ENST00000355633 UBTFL1P0CB47 393 aaPredicted RBP17.09■□□□□ 0.33
HOXA1-202ENST00000355633 NEXNQ0ZGT2 675 aa17.09■□□□□ 0.33
HOXA1-202ENST00000355633 SIRT2Q8IXJ6 389 aa17.09■□□□□ 0.33
HOXA1-202ENST00000355633 RPAP2Q8IXW5 612 aaPredicted RBP17.09■□□□□ 0.33
HOXA1-202ENST00000355633 METTL22Q9BUU2 404 aaPredicted RBP17.09■□□□□ 0.33
HOXA1-202ENST00000355633 CICQ96RK0 1608 aaPredicted RBP17.09■□□□□ 0.33
HOXA1-202ENST00000355633 ATP6V1AP38606 617 aa17.08■□□□□ 0.33
HOXA1-202ENST00000355633 CEP85Q6P2H3 762 aa17.08■□□□□ 0.33
HOXA1-202ENST00000355633 ANKRD44Q8N8A2 993 aa17.08■□□□□ 0.33
HOXA1-202ENST00000355633 BTAF1O14981 1849 aa17.08■□□□□ 0.32
HOXA1-202ENST00000355633 SBF2Q86WG5 1849 aa17.08■□□□□ 0.32
HOXA1-202ENST00000355633 RBM6P78332 1123 aaKnown RBP17.08■□□□□ 0.32
HOXA1-202ENST00000355633 TTLL7Q6ZT98 887 aa17.08■□□□□ 0.32
HOXA1-202ENST00000355633 BRWD3Q6RI45 1802 aa17.07■□□□□ 0.32
HOXA1-202ENST00000355633 CWF19L2Q2TBE0 894 aaKnown RBP17.07■□□□□ 0.32
HOXA1-202ENST00000355633 SMC5Q8IY18 1101 aa17.07■□□□□ 0.32
HOXA1-202ENST00000355633 MYD88Q99836 296 aa17.07■□□□□ 0.32
HOXA1-202ENST00000355633 NUP188Q5SRE5 1749 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms