RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 ANKARQ7Z5J8 1434 aa21.98■■□□□ 1.11
PDZD3-202ENST00000355547 POLA2Q14181 598 aa21.98■■□□□ 1.11
PDZD3-202ENST00000355547 RGPD8O14715 1765 aaPredicted RBP21.98■■□□□ 1.11
PDZD3-202ENST00000355547 NSFL1CQ9UNZ2 370 aaKnown RBP21.97■■□□□ 1.11
PDZD3-202ENST00000355547 USP54Q70EL1 1684 aa21.97■■□□□ 1.11
PDZD3-202ENST00000355547 MARF1Q9Y4F3 1742 aaKnown RBP21.96■■□□□ 1.11
PDZD3-202ENST00000355547 HSPA4P34932 840 aa21.96■■□□□ 1.11
PDZD3-202ENST00000355547 PLEKHG5O94827 1062 aa21.95■■□□□ 1.1
PDZD3-202ENST00000355547 HDGFL1Q5TGJ6 251 aa21.95■■□□□ 1.1
PDZD3-202ENST00000355547 OFD1O75665 1012 aa21.94■■□□□ 1.1
PDZD3-202ENST00000355547 FOXD4L5Q5VV16 416 aaPredicted RBP21.94■■□□□ 1.1
PDZD3-202ENST00000355547 FOXD4L4Q8WXT5 416 aaPredicted RBP21.94■■□□□ 1.1
PDZD3-202ENST00000355547 IL25Q9H293 177 aa21.94■■□□□ 1.1
PDZD3-202ENST00000355547 NOL7Q9UMY1 257 aaKnown RBP21.94■■□□□ 1.1
PDZD3-202ENST00000355547 TPM2P07951 284 aa21.94■■□□□ 1.1
PDZD3-202ENST00000355547 PPP1R42Q7Z4L9 355 aa21.94■■□□□ 1.1
PDZD3-202ENST00000355547 PHAXQ9H814 394 aaKnown RBP21.94■■□□□ 1.1
PDZD3-202ENST00000355547 IL1RAPL2Q9NP60 686 aa21.94■■□□□ 1.1
PDZD3-202ENST00000355547 CEMIPQ8WUJ3 1361 aa21.93■■□□□ 1.1
PDZD3-202ENST00000355547 SYCE3A1L190 88 aa21.93■■□□□ 1.1
PDZD3-202ENST00000355547 MSNP26038 577 aaKnown RBP21.93■■□□□ 1.1
PDZD3-202ENST00000355547 PI4K2BQ8TCG2 481 aa21.93■■□□□ 1.1
PDZD3-202ENST00000355547 NPHP4O75161 1426 aaPredicted RBP21.93■■□□□ 1.1
PDZD3-202ENST00000355547 RHPN1Q8TCX5 695 aa21.92■■□□□ 1.1
PDZD3-202ENST00000355547 UPF3BQ9BZI7 483 aaKnown RBP21.92■■□□□ 1.1
PDZD3-202ENST00000355547 SURF6O75683 361 aaKnown RBP21.91■■□□□ 1.1
PDZD3-202ENST00000355547 NUTM1Q86Y26 1132 aa21.91■■□□□ 1.1
PDZD3-202ENST00000355547 STRCQ7RTU9 1775 aa21.91■■□□□ 1.1
PDZD3-202ENST00000355547 HOXB7P09629 217 aa21.91■■□□□ 1.1
PDZD3-202ENST00000355547 SGSM2O43147 1006 aa21.9■■□□□ 1.1
PDZD3-202ENST00000355547 ZNF500O60304 480 aaPredicted RBP21.9■■□□□ 1.1
PDZD3-202ENST00000355547 KIF1BPQ96EK5 621 aa21.9■■□□□ 1.1
PDZD3-202ENST00000355547 NUTM2GQ5VZR2 741 aa21.9■■□□□ 1.1
PDZD3-202ENST00000355547 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.9■■□□□ 1.1
PDZD3-202ENST00000355547 RAD50Q92878 1312 aa21.9■■□□□ 1.1
PDZD3-202ENST00000355547 NOL8Q76FK4 1167 aaKnown RBP21.89■■□□□ 1.09
PDZD3-202ENST00000355547 WDR33Q9C0J8 1336 aaKnown RBP21.89■■□□□ 1.09
PDZD3-202ENST00000355547 MED1Q15648 1581 aaPredicted RBP21.89■■□□□ 1.09
PDZD3-202ENST00000355547 EIF4A1P60842 406 aaKnown RBP21.89■■□□□ 1.09
PDZD3-202ENST00000355547 ABTB2Q8N961 1025 aa21.89■■□□□ 1.09
PDZD3-202ENST00000355547 CHMP4AQ9BY43 222 aa21.89■■□□□ 1.09
PDZD3-202ENST00000355547 TERF1P54274 439 aa21.88■■□□□ 1.09
PDZD3-202ENST00000355547 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.88■■□□□ 1.09
PDZD3-202ENST00000355547 AEBP2Q6ZN18 517 aaPredicted RBP21.88■■□□□ 1.09
PDZD3-202ENST00000355547 LTV1Q96GA3 475 aaPredicted RBP21.88■■□□□ 1.09
PDZD3-202ENST00000355547 BEND3Q5T5X7 828 aa21.87■■□□□ 1.09
PDZD3-202ENST00000355547 KIAA1211Q6ZU35 1233 aa21.87■■□□□ 1.09
PDZD3-202ENST00000355547 SYAP1Q96A49 352 aaPredicted RBP21.87■■□□□ 1.09
PDZD3-202ENST00000355547 USP42Q9H9J4 1324 aaKnown RBP21.87■■□□□ 1.09
PDZD3-202ENST00000355547 SRGAP3O43295 1099 aa21.87■■□□□ 1.09
PDZD3-202ENST00000355547 MCM5P33992 734 aa21.87■■□□□ 1.09
PDZD3-202ENST00000355547 TTC14Q96N46 770 aa21.87■■□□□ 1.09
PDZD3-202ENST00000355547 LSG1Q9H089 658 aaKnown RBP21.87■■□□□ 1.09
PDZD3-202ENST00000355547 SNX14Q9Y5W7 946 aa21.86■■□□□ 1.09
PDZD3-202ENST00000355547 NBPF7P0C2Y1 421 aaPredicted RBP21.86■■□□□ 1.09
PDZD3-202ENST00000355547 TMEM87AQ8NBN3 555 aa21.86■■□□□ 1.09
PDZD3-202ENST00000355547 DNAAF4Q8WXU2 420 aa21.86■■□□□ 1.09
PDZD3-202ENST00000355547 HSP90AB4PQ58FF6 505 aa21.85■■□□□ 1.09
PDZD3-202ENST00000355547 CNTROBQ8N137 903 aa21.85■■□□□ 1.09
PDZD3-202ENST00000355547 ZKSCAN5Q9Y2L8 839 aa21.85■■□□□ 1.09
PDZD3-202ENST00000355547 USHBP1Q8N6Y0 703 aa21.85■■□□□ 1.09
PDZD3-202ENST00000355547 IP6K1Q92551 441 aa21.85■■□□□ 1.09
PDZD3-202ENST00000355547 TSPY26PQ9H489 355 aa21.85■■□□□ 1.09
PDZD3-202ENST00000355547 KCNA6P17658 529 aa21.84■■□□□ 1.09
PDZD3-202ENST00000355547 RPAP1Q9BWH6 1393 aaPredicted RBP21.84■■□□□ 1.09
PDZD3-202ENST00000355547 MAP4K4O95819 1239 aaPredicted RBP21.83■■□□□ 1.09
PDZD3-202ENST00000355547 USP48Q86UV5 1035 aa21.83■■□□□ 1.09
PDZD3-202ENST00000355547 CRYBG1Q9Y4K1 1723 aa21.83■■□□□ 1.09
PDZD3-202ENST00000355547 TTC41PQ6P2S7 1318 aa21.83■■□□□ 1.09
PDZD3-202ENST00000355547 EIF2S2P20042 333 aaKnown RBP21.83■■□□□ 1.09
PDZD3-202ENST00000355547 MTX1Q13505 466 aa21.83■■□□□ 1.09
PDZD3-202ENST00000355547 CHPF2Q9P2E5 772 aa21.83■■□□□ 1.09
PDZD3-202ENST00000355547 CCDC39Q9UFE4 941 aa21.83■■□□□ 1.09
PDZD3-202ENST00000355547 PI4KAP2A4QPH2 592 aa21.82■■□□□ 1.08
PDZD3-202ENST00000355547 GADD45BO75293 160 aaPredicted RBP21.82■■□□□ 1.08
PDZD3-202ENST00000355547 PHF14O94880 888 aa21.82■■□□□ 1.08
PDZD3-202ENST00000355547 PI4KAP1Q8N8J0 262 aa21.82■■□□□ 1.08
PDZD3-202ENST00000355547 LGR6Q9HBX8 967 aa21.82■■□□□ 1.08
PDZD3-202ENST00000355547 RASEFQ8IZ41 740 aa21.82■■□□□ 1.08
PDZD3-202ENST00000355547 KDM3BQ7LBC6 1761 aa21.82■■□□□ 1.08
PDZD3-202ENST00000355547 LIMCH1Q9UPQ0 1083 aa21.81■■□□□ 1.08
PDZD3-202ENST00000355547 NBPF6Q5VWK0 638 aa21.81■■□□□ 1.08
PDZD3-202ENST00000355547 NBPF4Q96M43 638 aa21.81■■□□□ 1.08
PDZD3-202ENST00000355547 GLRX3O76003 335 aaKnown RBP21.8■■□□□ 1.08
PDZD3-202ENST00000355547 RUFY3Q7L099 469 aa21.8■■□□□ 1.08
PDZD3-202ENST00000355547 ADCY9O60503 1353 aa21.8■■□□□ 1.08
PDZD3-202ENST00000355547 AK2P54819 239 aa21.8■■□□□ 1.08
PDZD3-202ENST00000355547 RNF214Q8ND24 703 aa21.8■■□□□ 1.08
PDZD3-202ENST00000355547 GDPD2Q9HCC8 539 aa21.8■■□□□ 1.08
PDZD3-202ENST00000355547 ZSCAN22P10073 491 aaPredicted RBP21.79■■□□□ 1.08
PDZD3-202ENST00000355547 RBM33Q96EV2 1170 aaKnown RBP21.79■■□□□ 1.08
PDZD3-202ENST00000355547 NFAT5O94916 1531 aa21.79■■□□□ 1.08
PDZD3-202ENST00000355547 KCNQ3O43525 872 aa21.78■■□□□ 1.08
PDZD3-202ENST00000355547 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.78■■□□□ 1.08
PDZD3-202ENST00000355547 PHF8Q9UPP1 1060 aa21.78■■□□□ 1.08
PDZD3-202ENST00000355547 CHD2O14647 1828 aaKnown RBP21.77■■□□□ 1.08
PDZD3-202ENST00000355547 UVSSAQ2YD98 709 aa21.77■■□□□ 1.08
PDZD3-202ENST00000355547 CWC27Q6UX04 472 aaKnown RBP21.77■■□□□ 1.08
PDZD3-202ENST00000355547 FAM184AQ8NB25 1140 aa21.77■■□□□ 1.08
PDZD3-202ENST00000355547 KCNB2Q92953 911 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms