RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 TOP2BQ02880 1626 aa15.4■□□□□ 0.06
SCN8A-202ENST00000355133 NAIPQ13075 1403 aa15.4■□□□□ 0.06
SCN8A-202ENST00000355133 C6orf229H3BNL8 230 aa15.39■□□□□ 0.05
SCN8A-202ENST00000355133 CCT2P78371 535 aaKnown RBP15.39■□□□□ 0.05
SCN8A-202ENST00000355133 IQCEQ6IPM2 695 aa15.39■□□□□ 0.05
SCN8A-202ENST00000355133 ATP5J2-PTCD1G3V325 749 aa15.39■□□□□ 0.05
SCN8A-202ENST00000355133 IFIT3O14879 490 aaKnown RBP15.39■□□□□ 0.05
SCN8A-202ENST00000355133 HMGB2P26583 209 aaKnown RBP15.39■□□□□ 0.05
SCN8A-202ENST00000355133 KRT28Q7Z3Y7 464 aa15.39■□□□□ 0.05
SCN8A-202ENST00000355133 GOLGA8AA7E2F4 631 aa15.39■□□□□ 0.05
SCN8A-202ENST00000355133 GOLGA8BA8MQT2 603 aa15.39■□□□□ 0.05
SCN8A-202ENST00000355133 JAKMIP3Q5VZ66 844 aa15.39■□□□□ 0.05
SCN8A-202ENST00000355133 PLCD4Q9BRC7 762 aa15.39■□□□□ 0.05
SCN8A-202ENST00000355133 ABCC11Q96J66 1382 aa15.39■□□□□ 0.05
SCN8A-202ENST00000355133 SSRP1Q08945 709 aaKnown RBP15.39■□□□□ 0.05
SCN8A-202ENST00000355133 FLIIQ13045 1269 aa15.39■□□□□ 0.05
SCN8A-202ENST00000355133 DHX37Q8IY37 1157 aaKnown RBP15.39■□□□□ 0.05
SCN8A-202ENST00000355133 CAMSAP2Q08AD1 1489 aa15.38■□□□□ 0.05
SCN8A-202ENST00000355133 PDIA4P13667 645 aaKnown RBP15.38■□□□□ 0.05
SCN8A-202ENST00000355133 SLC4A8Q2Y0W8 1093 aa15.38■□□□□ 0.05
SCN8A-202ENST00000355133 IL27Q8NEV9 243 aa15.38■□□□□ 0.05
SCN8A-202ENST00000355133 POTEJP0CG39 1038 aa15.38■□□□□ 0.05
SCN8A-202ENST00000355133 NLRP5P59047 1200 aa15.38■□□□□ 0.05
SCN8A-202ENST00000355133 CUL5Q93034 780 aa15.38■□□□□ 0.05
SCN8A-202ENST00000355133 SNRKQ9NRH2 765 aa15.38■□□□□ 0.05
SCN8A-202ENST00000355133 KIAA0586Q9BVV6 1533 aa15.38■□□□□ 0.05
SCN8A-202ENST00000355133 ADGRL1O94910 1474 aa15.38■□□□□ 0.05
SCN8A-202ENST00000355133 UQCRHLA0A096LP55 91 aa15.38■□□□□ 0.05
SCN8A-202ENST00000355133 CCDC66A2RUB6 948 aa15.38■□□□□ 0.05
SCN8A-202ENST00000355133 C11orf95C9JLR9 678 aaPredicted RBP15.38■□□□□ 0.05
SCN8A-202ENST00000355133 UQCRHP07919 91 aa15.38■□□□□ 0.05
SCN8A-202ENST00000355133 IDI1Q13907 227 aa15.38■□□□□ 0.05
SCN8A-202ENST00000355133 TAF3Q5VWG9 929 aa15.38■□□□□ 0.05
SCN8A-202ENST00000355133 TSG101Q99816 390 aa15.38■□□□□ 0.05
SCN8A-202ENST00000355133 GOLIM4O00461 696 aa15.37■□□□□ 0.05
SCN8A-202ENST00000355133 JARID2Q92833 1246 aaPredicted RBP15.37■□□□□ 0.05
SCN8A-202ENST00000355133 EIF3JO75822 258 aaKnown RBP15.37■□□□□ 0.05
SCN8A-202ENST00000355133 MYCNP04198 464 aaPredicted RBP15.37■□□□□ 0.05
SCN8A-202ENST00000355133 PPP4R3AQ6IN85 833 aa15.37■□□□□ 0.05
SCN8A-202ENST00000355133 NKTRP30414 1462 aaKnown RBP15.37■□□□□ 0.05
SCN8A-202ENST00000355133 HMGB1P09429 215 aaKnown RBP15.37■□□□□ 0.05
SCN8A-202ENST00000355133 CCDC144CPQ8IYA2 1237 aa15.37■□□□□ 0.05
SCN8A-202ENST00000355133 SH2B1Q9NRF2 756 aaPredicted RBP15.37■□□□□ 0.05
SCN8A-202ENST00000355133 CCDC194A0A1B0GVG4 234 aa15.36■□□□□ 0.05
SCN8A-202ENST00000355133 KIAA0754O94854 1291 aa15.36■□□□□ 0.05
SCN8A-202ENST00000355133 FKBP15Q5T1M5 1219 aa15.36■□□□□ 0.05
SCN8A-202ENST00000355133 RNF41Q9H4P4 317 aaPredicted RBP15.36■□□□□ 0.05
SCN8A-202ENST00000355133 LIG1P18858 919 aa15.36■□□□□ 0.05
SCN8A-202ENST00000355133 SPA17Q15506 151 aa15.36■□□□□ 0.05
SCN8A-202ENST00000355133 CCDC102AQ96A19 550 aa15.36■□□□□ 0.05
SCN8A-202ENST00000355133 FAM83GA6ND36 823 aa15.36■□□□□ 0.05
SCN8A-202ENST00000355133 TRMT1LQ7Z2T5 733 aaKnown RBP15.36■□□□□ 0.05
SCN8A-202ENST00000355133 GBP2P32456 591 aaPredicted RBP15.36■□□□□ 0.05
SCN8A-202ENST00000355133 CACNA2D4Q7Z3S7 1137 aa15.36■□□□□ 0.05
SCN8A-202ENST00000355133 TRIM21P19474 475 aaKnown RBP15.35■□□□□ 0.05
SCN8A-202ENST00000355133 TMEM266Q2M3C6 531 aa15.35■□□□□ 0.05
SCN8A-202ENST00000355133 LDHAL6AQ6ZMR3 332 aa15.35■□□□□ 0.05
SCN8A-202ENST00000355133 CATIPQ7Z7H3 387 aa15.35■□□□□ 0.05
SCN8A-202ENST00000355133 CCDC148Q8NFR7 591 aa15.35■□□□□ 0.05
SCN8A-202ENST00000355133 SCAND2PQ9GZW5 306 aaPredicted RBP15.35■□□□□ 0.05
SCN8A-202ENST00000355133 ANO10Q9NW15 660 aa15.35■□□□□ 0.05
SCN8A-202ENST00000355133 TRIM27P14373 513 aa15.35■□□□□ 0.05
SCN8A-202ENST00000355133 PAXIP1Q6ZW49 1069 aaPredicted RBP15.35■□□□□ 0.05
SCN8A-202ENST00000355133 SLF2Q8IX21 1173 aa15.35■□□□□ 0.05
SCN8A-202ENST00000355133 CHRNA2Q15822 529 aa15.35■□□□□ 0.05
SCN8A-202ENST00000355133 VAT1LQ9HCJ6 419 aa15.35■□□□□ 0.05
SCN8A-202ENST00000355133 IFNL2Q8IZJ0 200 aa15.35■□□□□ 0.05
SCN8A-202ENST00000355133 PHAXQ9H814 394 aaKnown RBP15.35■□□□□ 0.05
SCN8A-202ENST00000355133 CWC25Q9NXE8 425 aaPredicted RBP15.35■□□□□ 0.05
SCN8A-202ENST00000355133 RAB11FIP4Q86YS3 637 aa15.34■□□□□ 0.05
SCN8A-202ENST00000355133 LIMCH1Q9UPQ0 1083 aa15.34■□□□□ 0.05
SCN8A-202ENST00000355133 PPFIA3O75145 1194 aa15.34■□□□□ 0.05
SCN8A-202ENST00000355133 SFPQP23246 707 aaKnown RBP eCLIP15.34■□□□□ 0.05
SCN8A-202ENST00000355133 HAND2P61296 217 aa15.34■□□□□ 0.05
SCN8A-202ENST00000355133 TSHZ3Q63HK5 1081 aa15.34■□□□□ 0.05
SCN8A-202ENST00000355133 PLB1Q6P1J6 1458 aa15.34■□□□□ 0.05
SCN8A-202ENST00000355133 DNMBPQ6XZF7 1577 aa15.34■□□□□ 0.05
SCN8A-202ENST00000355133 CCDC183Q5T5S1 534 aa15.34■□□□□ 0.05
SCN8A-202ENST00000355133 EVI5LQ96CN4 794 aa15.34■□□□□ 0.05
SCN8A-202ENST00000355133 RAB34Q9BZG1 259 aa15.34■□□□□ 0.05
SCN8A-202ENST00000355133 FAM135AQ9P2D6 1515 aa15.34■□□□□ 0.05
SCN8A-202ENST00000355133 UBE3BQ7Z3V4 1068 aa15.34■□□□□ 0.05
SCN8A-202ENST00000355133 PTPRCP08575 1304 aa15.34■□□□□ 0.05
SCN8A-202ENST00000355133 DNA2P51530 1060 aa15.34■□□□□ 0.05
SCN8A-202ENST00000355133 CKAP2LQ8IYA6 745 aa15.34■□□□□ 0.05
SCN8A-202ENST00000355133 ANXA1P04083 346 aa15.33■□□□□ 0.04
SCN8A-202ENST00000355133 CNNM3Q8NE01 707 aa15.33■□□□□ 0.04
SCN8A-202ENST00000355133 ANKRD24Q8TF21 1146 aa15.33■□□□□ 0.04
SCN8A-202ENST00000355133 NOS1P29475 1434 aa15.33■□□□□ 0.04
SCN8A-202ENST00000355133 SSFA2P28290 1259 aa15.33■□□□□ 0.04
SCN8A-202ENST00000355133 DDX46Q7L014 1031 aaKnown RBP15.33■□□□□ 0.04
SCN8A-202ENST00000355133 ECHDC1Q9NTX5 307 aa15.33■□□□□ 0.04
SCN8A-202ENST00000355133 ABCC5O15440 1437 aa15.33■□□□□ 0.04
SCN8A-202ENST00000355133 CPLX3Q8WVH0 158 aa15.33■□□□□ 0.04
SCN8A-202ENST00000355133 MBIPQ9NS73 344 aa15.32■□□□□ 0.04
SCN8A-202ENST00000355133 PI4KAP2A4QPH2 592 aa15.32■□□□□ 0.04
SCN8A-202ENST00000355133 EZRP15311 586 aaKnown RBP15.32■□□□□ 0.04
SCN8A-202ENST00000355133 CETN2P41208 172 aa15.32■□□□□ 0.04
SCN8A-202ENST00000355133 PI4KAP1Q8N8J0 262 aa15.32■□□□□ 0.04
SCN8A-202ENST00000355133 ZNF622Q969S3 477 aaKnown RBP eCLIP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms