RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 KIF1BPQ96EK5 621 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 FAM107BQ9H098 131 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 SSRP1Q08945 709 aaKnown RBP6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 BRD4O60885 1362 aaPredicted RBP6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 POLR3GO15318 223 aaPredicted RBP6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 KIF20AO95235 890 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 ZNF692Q9BU19 519 aaPredicted RBP6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 PRC1O43663 620 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 MAATS1Q7Z4T9 603 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 DAAM2Q86T65 1068 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 SYNCQ9H7C4 482 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 CNNM3Q8NE01 707 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 TIGD1Q96MW7 591 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 CCDC183Q5T5S1 534 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 ATF7IPQ6VMQ6 1270 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 CALML4Q96GE6 196 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 YEATS4O95619 227 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 CDK19Q9BWU1 502 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 CCDC88BA6NC98 1476 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 CTR9Q6PD62 1173 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 APBB1IPQ7Z5R6 666 aaPredicted RBP6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 SYCE3A1L190 88 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 GUCY1B3Q02153 619 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 SLC12A7Q9Y666 1083 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 TMX1Q9H3N1 280 aa6.68□□□□□ -1.34
SRGAP1-201ENST00000355086 STXBP4Q6ZWJ1 553 aa6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 CCDC82Q8N4S0 544 aa6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 BOLA2Q9H3K6 86 aa6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 TCERG1LQ5VWI1 586 aa6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 TRMT1LQ7Z2T5 733 aaKnown RBP6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 RPGRQ92834 1020 aaKnown RBP6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 LRSAM1Q6UWE0 723 aa6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 MAP3K12Q12852 859 aa6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 PAIP2Q9BPZ3 127 aaKnown RBP6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 BICD1Q96G01 975 aa6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 AMPD3Q01432 767 aa6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 UTP14AQ9BVJ6 771 aaKnown RBP6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 CCDC7Q96M83 1385 aa6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 SMARCC1Q92922 1105 aaPredicted RBP6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 TCP11L1Q9NUJ3 509 aa6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 SAMM50Q9Y512 469 aa6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 MPHOSPH6Q99547 160 aaKnown RBP6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 CIZ1Q9ULV3 898 aaPredicted RBP6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 FYCO1Q9BQS8 1478 aa6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 OTUD6BQ8N6M0 293 aa6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 PPP2R1AP30153 589 aa6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 FAM114A1Q8IWE2 563 aa6.67□□□□□ -1.34
SRGAP1-201ENST00000355086 NUTM1Q86Y26 1132 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 FBF1Q8TES7 1133 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 TBC1D5Q92609 795 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 MVPQ14764 893 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 CDCA7LQ96GN5 454 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 CLIP2Q9UDT6 1046 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 RRP9O43818 475 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 CCDC194A0A1B0GVG4 234 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 CCDC174Q6PII3 467 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 WDR63Q8IWG1 891 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 CALCOCO1Q9P1Z2 691 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 CTAGE5O15320 804 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 SLC5A1P13866 664 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 DDX12PQ92771 950 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 HMGB1P09429 215 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 RAB11FIP3O75154 756 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 IFI16Q16666 785 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 CCDC40Q4G0X9 1142 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 THEMISQ8N1K5 641 aaPredicted RBP6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 POTEB2H3BUK9 544 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 CABP1Q9NZU7 370 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 SLU7O95391 586 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 FERMT3Q86UX7 667 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 MCM4P33991 863 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 RGS22Q8NE09 1264 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 TRMT1Q9NXH9 659 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 ZNF213O14771 459 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 CCDC12Q8WUD4 166 aaPredicted RBP6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 CPLX3Q8WVH0 158 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 MYOM3Q5VTT5 1437 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 IFIT3O14879 490 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 GLRX3O76003 335 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 GPATCH11Q8N954 259 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 MXRA7P84157 204 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 RNF41Q9H4P4 317 aaPredicted RBP6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 ESPNB1AK53 854 aa6.66□□□□□ -1.34
SRGAP1-201ENST00000355086 PRPF40BQ6NWY9 871 aaKnown RBP6.65□□□□□ -1.34
SRGAP1-201ENST00000355086 CEP112Q8N8E3 955 aa6.65□□□□□ -1.34
SRGAP1-201ENST00000355086 CCDC160A6NGH7 325 aa6.65□□□□□ -1.34
SRGAP1-201ENST00000355086 SMARCA2P51531 1590 aa6.65□□□□□ -1.34
SRGAP1-201ENST00000355086 GNAT3A8MTJ3 354 aa6.65□□□□□ -1.34
SRGAP1-201ENST00000355086 PLVAPQ9BX97 442 aa6.65□□□□□ -1.34
SRGAP1-201ENST00000355086 MMRN2Q9H8L6 949 aa6.65□□□□□ -1.34
SRGAP1-201ENST00000355086 HSF2BPO75031 334 aa6.65□□□□□ -1.34
SRGAP1-201ENST00000355086 KIAA0753Q2KHM9 967 aa6.65□□□□□ -1.34
SRGAP1-201ENST00000355086 CCDC155Q8N6L0 562 aa6.65□□□□□ -1.34
SRGAP1-201ENST00000355086 SCAPERQ9BY12 1400 aa6.65□□□□□ -1.34
SRGAP1-201ENST00000355086 NDC80O14777 642 aa6.65□□□□□ -1.34
SRGAP1-201ENST00000355086 CBX1P83916 185 aa6.65□□□□□ -1.34
SRGAP1-201ENST00000355086 MYD88Q99836 296 aa6.65□□□□□ -1.34
SRGAP1-201ENST00000355086 GOLGA8BA8MQT2 603 aa6.65□□□□□ -1.34
SRGAP1-201ENST00000355086 CKAP4Q07065 602 aaKnown RBP6.65□□□□□ -1.34
SRGAP1-201ENST00000355086 SH2B1Q9NRF2 756 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms