RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 KRT24Q2M2I5 525 aa9.33□□□□□ -0.92
CD46-203ENST00000354848 PUS7Q96PZ0 661 aaKnown RBP9.33□□□□□ -0.92
CD46-203ENST00000354848 MSH6P52701 1360 aa9.33□□□□□ -0.92
CD46-203ENST00000354848 PNPLA6Q8IY17 1366 aa9.33□□□□□ -0.92
CD46-203ENST00000354848 TNNT3P45378 269 aaPredicted RBP9.33□□□□□ -0.92
CD46-203ENST00000354848 NFE2L2Q16236 605 aa9.33□□□□□ -0.92
CD46-203ENST00000354848 NFATC2IPQ8NCF5 419 aa9.33□□□□□ -0.92
CD46-203ENST00000354848 PHACTR3Q96KR7 559 aa9.33□□□□□ -0.92
CD46-203ENST00000354848 NUP62CLQ9H1M0 184 aa9.33□□□□□ -0.92
CD46-203ENST00000354848 CABP2Q9NPB3 220 aa9.33□□□□□ -0.92
CD46-203ENST00000354848 RSPH14Q9UHP6 348 aa9.33□□□□□ -0.92
CD46-203ENST00000354848 DLG5Q8TDM6 1919 aa9.33□□□□□ -0.92
CD46-203ENST00000354848 PTPRCP08575 1304 aa9.33□□□□□ -0.92
CD46-203ENST00000354848 LRRC8AQ8IWT6 810 aa9.33□□□□□ -0.92
CD46-203ENST00000354848 NEK11Q8NG66 645 aa9.33□□□□□ -0.92
CD46-203ENST00000354848 MEIS3Q99687 375 aa9.33□□□□□ -0.92
CD46-203ENST00000354848 SMC3Q9UQE7 1217 aa9.33□□□□□ -0.92
CD46-203ENST00000354848 PLA2G4AP47712 749 aa9.32□□□□□ -0.92
CD46-203ENST00000354848 RNF20Q5VTR2 975 aa9.32□□□□□ -0.92
CD46-203ENST00000354848 CKAP2LQ8IYA6 745 aa9.32□□□□□ -0.92
CD46-203ENST00000354848 TDRD7Q8NHU6 1098 aaKnown RBP9.32□□□□□ -0.92
CD46-203ENST00000354848 RILPL2Q969X0 211 aa9.32□□□□□ -0.92
CD46-203ENST00000354848 LARP6Q9BRS8 491 aaKnown RBP9.32□□□□□ -0.92
CD46-203ENST00000354848 YY1AP1Q9H869 796 aa9.32□□□□□ -0.92
CD46-203ENST00000354848 C14orf93Q9H972 538 aaKnown RBP9.32□□□□□ -0.92
CD46-203ENST00000354848 CHMP3Q9Y3E7 222 aa9.32□□□□□ -0.92
CD46-203ENST00000354848 SALL3Q9BXA9 1300 aa9.32□□□□□ -0.92
CD46-203ENST00000354848 FYB1O15117 783 aa9.32□□□□□ -0.92
CD46-203ENST00000354848 HSPA4P34932 840 aa9.32□□□□□ -0.92
CD46-203ENST00000354848 MUM1L1Q5H9M0 696 aa9.32□□□□□ -0.92
CD46-203ENST00000354848 RASSF4Q9H2L5 321 aa9.32□□□□□ -0.92
CD46-203ENST00000354848 PNMA6AP0CW24 399 aaPredicted RBP9.31□□□□□ -0.92
CD46-203ENST00000354848 LIG1P18858 919 aa9.31□□□□□ -0.92
CD46-203ENST00000354848 CLCN6P51797 869 aa9.31□□□□□ -0.92
CD46-203ENST00000354848 ARID5BQ14865 1188 aa9.31□□□□□ -0.92
CD46-203ENST00000354848 ERCC6LQ2NKX8 1250 aa9.31□□□□□ -0.92
CD46-203ENST00000354848 IL25Q9H293 177 aa9.31□□□□□ -0.92
CD46-203ENST00000354848 MTMR6Q9Y217 621 aa9.31□□□□□ -0.92
CD46-203ENST00000354848 ARHGEF28Q8N1W1 1705 aaKnown RBP9.31□□□□□ -0.92
CD46-203ENST00000354848 PPLO60437 1756 aa9.31□□□□□ -0.92
CD46-203ENST00000354848 ABCC1P33527 1531 aa9.31□□□□□ -0.92
CD46-203ENST00000354848 HTATSF1O43719 755 aaKnown RBP9.31□□□□□ -0.92
CD46-203ENST00000354848 NOP2P46087 812 aaKnown RBP9.31□□□□□ -0.92
CD46-203ENST00000354848 AK2P54819 239 aa9.31□□□□□ -0.92
CD46-203ENST00000354848 SYT10Q6XYQ8 523 aa9.31□□□□□ -0.92
CD46-203ENST00000354848 TTC14Q96N46 770 aa9.31□□□□□ -0.92
CD46-203ENST00000354848 CDC25BP30305 580 aa9.31□□□□□ -0.92
CD46-203ENST00000354848 TEX35Q5T0J7 233 aa9.31□□□□□ -0.92
CD46-203ENST00000354848 RUFY3Q7L099 469 aa9.31□□□□□ -0.92
CD46-203ENST00000354848 TTC6Q86TZ1 520 aa9.31□□□□□ -0.92
CD46-203ENST00000354848 TXLNBQ8N3L3 684 aa9.31□□□□□ -0.92
CD46-203ENST00000354848 TNMDQ9H2S6 317 aa9.31□□□□□ -0.92
CD46-203ENST00000354848 TRMT1Q9NXH9 659 aaKnown RBP9.31□□□□□ -0.92
CD46-203ENST00000354848 LIMCH1Q9UPQ0 1083 aa9.31□□□□□ -0.92
CD46-203ENST00000354848 KIAA0232Q92628 1395 aa9.3□□□□□ -0.92
CD46-203ENST00000354848 DTNBO60941 627 aa9.3□□□□□ -0.92
CD46-203ENST00000354848 HMMRO75330 724 aa9.3□□□□□ -0.92
CD46-203ENST00000354848 HMOX1P09601 288 aa9.3□□□□□ -0.92
CD46-203ENST00000354848 SKILP12757 684 aa9.3□□□□□ -0.92
CD46-203ENST00000354848 KRBA2Q6ZNG9 492 aa9.3□□□□□ -0.92
CD46-203ENST00000354848 SECISBP2LQ93073 1101 aaKnown RBP9.3□□□□□ -0.92
CD46-203ENST00000354848 POLKQ9UBT6 870 aa9.3□□□□□ -0.92
CD46-203ENST00000354848 FANCAO15360 1455 aa9.3□□□□□ -0.92
CD46-203ENST00000354848 NEMFO60524 1076 aa9.3□□□□□ -0.92
CD46-203ENST00000354848 GJB2P29033 226 aa9.3□□□□□ -0.92
CD46-203ENST00000354848 ZNF165P49910 485 aa9.3□□□□□ -0.92
CD46-203ENST00000354848 GEMIN8Q9NWZ8 242 aaKnown RBP9.3□□□□□ -0.92
CD46-203ENST00000354848 ZFYVE16Q7Z3T8 1539 aa9.3□□□□□ -0.92
CD46-203ENST00000354848 AATKQ6ZMQ8 1374 aa9.3□□□□□ -0.92
CD46-203ENST00000354848 DHX16O60231 1041 aaKnown RBP9.29□□□□□ -0.92
CD46-203ENST00000354848 UNC5CLQ8IV45 518 aa9.29□□□□□ -0.92
CD46-203ENST00000354848 CCAR2Q8N163 923 aaKnown RBP9.29□□□□□ -0.92
CD46-203ENST00000354848 DACT1Q9NYF0 836 aa9.29□□□□□ -0.92
CD46-203ENST00000354848 ABCA9Q8IUA7 1624 aa9.29□□□□□ -0.92
CD46-203ENST00000354848 ADGRB3O60242 1522 aa9.29□□□□□ -0.92
CD46-203ENST00000354848 MYO1CO00159 1063 aa9.29□□□□□ -0.92
CD46-203ENST00000354848 TRIM66O15016 1216 aa9.29□□□□□ -0.92
CD46-203ENST00000354848 POLR3GO15318 223 aaPredicted RBP9.29□□□□□ -0.92
CD46-203ENST00000354848 LARGE1O95461 756 aa9.29□□□□□ -0.92
CD46-203ENST00000354848 C10orf67Q8IYJ2 551 aa9.29□□□□□ -0.92
CD46-203ENST00000354848 LRRN4CLQ8ND94 238 aa9.29□□□□□ -0.92
CD46-203ENST00000354848 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.29□□□□□ -0.92
CD46-203ENST00000354848 CHMP4CQ96CF2 233 aa9.29□□□□□ -0.92
CD46-203ENST00000354848 DNAJC25Q9H1X3 360 aa9.29□□□□□ -0.92
CD46-203ENST00000354848 EXOC6BQ9Y2D4 811 aa9.29□□□□□ -0.92
CD46-203ENST00000354848 VPS37CA5D8V6 355 aaPredicted RBP9.29□□□□□ -0.92
CD46-203ENST00000354848 EPB41L2O43491 1005 aaKnown RBP9.29□□□□□ -0.92
CD46-203ENST00000354848 ZRANB2O95218 330 aaKnown RBP eCLIP9.29□□□□□ -0.922e-7■■■□□ 16.1
CD46-203ENST00000354848 TPM4P67936 248 aa9.29□□□□□ -0.92
CD46-203ENST00000354848 ST5P78524 1137 aa9.29□□□□□ -0.92
CD46-203ENST00000354848 CCZ1BP86790 482 aa9.29□□□□□ -0.92
CD46-203ENST00000354848 CCZ1P86791 482 aaPredicted RBP9.29□□□□□ -0.92
CD46-203ENST00000354848 RBM43Q6ZSC3 357 aaKnown RBP9.29□□□□□ -0.92
CD46-203ENST00000354848 SMARCE1Q969G3 411 aa9.29□□□□□ -0.92
CD46-203ENST00000354848 TMX1Q9H3N1 280 aa9.29□□□□□ -0.92
CD46-203ENST00000354848 L2HGDHQ9H9P8 463 aa9.29□□□□□ -0.92
CD46-203ENST00000354848 LCMT1Q9UIC8 334 aa9.29□□□□□ -0.92
CD46-203ENST00000354848 SNX14Q9Y5W7 946 aa9.29□□□□□ -0.92
CD46-203ENST00000354848 CAMSAP1Q5T5Y3 1602 aa9.28□□□□□ -0.92
CD46-203ENST00000354848 CHGAP10645 457 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms