RNA–Protein interactions for RNA: ENST00000353319.8

PTPN2-203, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-203ENST00000353319 COL14A1Q05707 1796 aaKnown RBP13.13□□□□□ -0.31
PTPN2-203ENST00000353319 ADCY9O60503 1353 aa13.13□□□□□ -0.31
PTPN2-203ENST00000353319 ALDH1L1O75891 902 aa13.13□□□□□ -0.31
PTPN2-203ENST00000353319 SNRPA1P09661 255 aaKnown RBP13.13□□□□□ -0.31
PTPN2-203ENST00000353319 NPM2Q86SE8 214 aaKnown RBP13.13□□□□□ -0.31
PTPN2-203ENST00000353319 ZNF496Q96IT1 587 aaPredicted RBP13.13□□□□□ -0.31
PTPN2-203ENST00000353319 FMNL2Q96PY5 1086 aa13.13□□□□□ -0.31
PTPN2-203ENST00000353319 ZBTB47Q9UFB7 747 aaPredicted RBP13.13□□□□□ -0.31
PTPN2-203ENST00000353319 PRAMEF22A3QJZ6 481 aa13.12□□□□□ -0.31
PTPN2-203ENST00000353319 SEC24BO95487 1268 aa13.12□□□□□ -0.31
PTPN2-203ENST00000353319 TTC5Q8N0Z6 440 aa13.12□□□□□ -0.31
PTPN2-203ENST00000353319 STRN4Q9NRL3 753 aa13.12□□□□□ -0.31
PTPN2-203ENST00000353319 NOP58Q9Y2X3 529 aaKnown RBP13.12□□□□□ -0.31
PTPN2-203ENST00000353319 DDX58O95786 925 aaKnown RBP13.11□□□□□ -0.31
PTPN2-203ENST00000353319 UBTFL1P0CB47 393 aaPredicted RBP13.11□□□□□ -0.31
PTPN2-203ENST00000353319 PROSER3Q2NL68 480 aa13.11□□□□□ -0.31
PTPN2-203ENST00000353319 BTG4Q9NY30 223 aa13.11□□□□□ -0.31
PTPN2-203ENST00000353319 HDAC5Q9UQL6 1122 aa13.11□□□□□ -0.31
PTPN2-203ENST00000353319 ANXA1P04083 346 aa13.1□□□□□ -0.31
PTPN2-203ENST00000353319 POTEHQ6S545 545 aa13.1□□□□□ -0.31
PTPN2-203ENST00000353319 PLEKHM2Q8IWE5 1019 aa13.1□□□□□ -0.31
PTPN2-203ENST00000353319 SHANK3Q9BYB0 1731 aa13.1□□□□□ -0.31
PTPN2-203ENST00000353319 ERBB4Q15303 1308 aa13.1□□□□□ -0.31
PTPN2-203ENST00000353319 LRP10Q7Z4F1 713 aa13.09□□□□□ -0.31
PTPN2-203ENST00000353319 LINS1Q8NG48 757 aa13.09□□□□□ -0.31
PTPN2-203ENST00000353319 SSH3Q8TE77 659 aa13.09□□□□□ -0.31
PTPN2-203ENST00000353319 UPF2Q9HAU5 1272 aaKnown RBP13.09□□□□□ -0.31
PTPN2-203ENST00000353319 C5P01031 1676 aa13.09□□□□□ -0.31
PTPN2-203ENST00000353319 MAP3K2Q9Y2U5 619 aa13.08□□□□□ -0.31
PTPN2-203ENST00000353319 USP16Q9Y5T5 823 aa13.08□□□□□ -0.31
PTPN2-203ENST00000353319 LRRFIP2Q9Y608 721 aaKnown RBP13.08□□□□□ -0.31
PTPN2-203ENST00000353319 DISP2A7MBM2 1401 aa13.08□□□□□ -0.31
PTPN2-203ENST00000353319 UTYO14607 1347 aa13.08□□□□□ -0.32
PTPN2-203ENST00000353319 PNMA6EA0A0J9YXQ4 647 aa13.08□□□□□ -0.32
PTPN2-203ENST00000353319 TOM1O60784 492 aa13.08□□□□□ -0.32
PTPN2-203ENST00000353319 MTX1Q13505 466 aa13.08□□□□□ -0.32
PTPN2-203ENST00000353319 POLA2Q14181 598 aa13.08□□□□□ -0.32
PTPN2-203ENST00000353319 TBC1D32Q96NH3 1257 aa13.08□□□□□ -0.32
PTPN2-203ENST00000353319 OSBPL3Q9H4L5 887 aa13.08□□□□□ -0.32
PTPN2-203ENST00000353319 COL16A1Q07092 1604 aaPredicted RBP13.07□□□□□ -0.32
PTPN2-203ENST00000353319 GLI3P10071 1580 aa13.07□□□□□ -0.32
PTPN2-203ENST00000353319 UBR2Q8IWV8 1755 aa13.07□□□□□ -0.32
PTPN2-203ENST00000353319 EIF5BO60841 1220 aaKnown RBP13.07□□□□□ -0.32
PTPN2-203ENST00000353319 TNS2Q63HR2 1409 aa13.06□□□□□ -0.32
PTPN2-203ENST00000353319 PAPPAQ13219 1627 aa13.06□□□□□ -0.32
PTPN2-203ENST00000353319 RAB11FIP3O75154 756 aa13.06□□□□□ -0.32
PTPN2-203ENST00000353319 NBPF7P0C2Y1 421 aaPredicted RBP13.06□□□□□ -0.32
PTPN2-203ENST00000353319 DDX54Q8TDD1 881 aaKnown RBP13.06□□□□□ -0.32
PTPN2-203ENST00000353319 PHLPP1O60346 1717 aa13.05□□□□□ -0.32
PTPN2-203ENST00000353319 TTC22Q5TAA0 569 aa13.05□□□□□ -0.32
PTPN2-203ENST00000353319 ERICH6Q7L0X2 663 aa13.05□□□□□ -0.32
PTPN2-203ENST00000353319 COPS6Q7L5N1 327 aa13.05□□□□□ -0.32
PTPN2-203ENST00000353319 C16orf71Q8IYS4 520 aaPredicted RBP13.05□□□□□ -0.32
PTPN2-203ENST00000353319 METTL22Q9BUU2 404 aaPredicted RBP13.05□□□□□ -0.32
PTPN2-203ENST00000353319 CDCA7Q9BWT1 371 aaPredicted RBP13.05□□□□□ -0.32
PTPN2-203ENST00000353319 LAMB4A4D0S4 1761 aa13.05□□□□□ -0.32
PTPN2-203ENST00000353319 PLCH1Q4KWH8 1693 aa13.05□□□□□ -0.32
PTPN2-203ENST00000353319 KCPQ6ZWJ8 1503 aa13.04□□□□□ -0.32
PTPN2-203ENST00000353319 ANKRD13DQ6ZTN6 518 aa13.04□□□□□ -0.32
PTPN2-203ENST00000353319 PPP1R42Q7Z4L9 355 aa13.04□□□□□ -0.32
PTPN2-203ENST00000353319 RIC3Q7Z5B4 369 aa13.04□□□□□ -0.32
PTPN2-203ENST00000353319 XAGE3Q8WTP9 111 aa13.04□□□□□ -0.32
PTPN2-203ENST00000353319 LRRCC1Q9C099 1032 aa13.04□□□□□ -0.32
PTPN2-203ENST00000353319 THRAP3Q9Y2W1 955 aaKnown RBP13.04□□□□□ -0.32
PTPN2-203ENST00000353319 SALL3Q9BXA9 1300 aa13.04□□□□□ -0.32
PTPN2-203ENST00000353319 SMARCA5O60264 1052 aaPredicted RBP13.03□□□□□ -0.32
PTPN2-203ENST00000353319 ANP32EQ9BTT0 268 aa13.03□□□□□ -0.32
PTPN2-203ENST00000353319 C9orf78Q9NZ63 289 aaPredicted RBP13.03□□□□□ -0.32
PTPN2-203ENST00000353319 GRM8O00222 908 aa13.03□□□□□ -0.32
PTPN2-203ENST00000353319 EXOC5O00471 708 aa13.03□□□□□ -0.32
PTPN2-203ENST00000353319 IGKV5-2P06315 115 aa13.03□□□□□ -0.32
PTPN2-203ENST00000353319 MYL6BP14649 208 aa13.03□□□□□ -0.32
PTPN2-203ENST00000353319 GSPT1P15170 499 aaKnown RBP13.03□□□□□ -0.32
PTPN2-203ENST00000353319 NEXNQ0ZGT2 675 aa13.03□□□□□ -0.32
PTPN2-203ENST00000353319 AIMP1Q12904 312 aaKnown RBP13.03□□□□□ -0.32
PTPN2-203ENST00000353319 HSP90AB4PQ58FF6 505 aa13.03□□□□□ -0.32
PTPN2-203ENST00000353319 VSIG10Q8N0Z9 540 aa13.03□□□□□ -0.32
PTPN2-203ENST00000353319 TMOD3Q9NYL9 352 aa13.03□□□□□ -0.32
PTPN2-203ENST00000353319 STAP2Q9UGK3 403 aa13.03□□□□□ -0.32
PTPN2-203ENST00000353319 EXOC6BQ9Y2D4 811 aa13.03□□□□□ -0.32
PTPN2-203ENST00000353319 LRP6O75581 1613 aa13.02□□□□□ -0.32
PTPN2-203ENST00000353319 SRGAP3O43295 1099 aa13.02□□□□□ -0.33
PTPN2-203ENST00000353319 CDC45O75419 566 aa13.02□□□□□ -0.33
PTPN2-203ENST00000353319 PDE1AP54750 535 aa13.02□□□□□ -0.33
PTPN2-203ENST00000353319 CWF19L2Q2TBE0 894 aaKnown RBP13.02□□□□□ -0.33
PTPN2-203ENST00000353319 PLBD2Q8NHP8 589 aa13.02□□□□□ -0.33
PTPN2-203ENST00000353319 TEX13AQ9BXU3 409 aaPredicted RBP13.02□□□□□ -0.33
PTPN2-203ENST00000353319 C22orf23Q9BZE7 217 aa13.02□□□□□ -0.33
PTPN2-203ENST00000353319 USP35Q9P2H5 1018 aa13.02□□□□□ -0.33
PTPN2-203ENST00000353319 TOGARAM1Q9Y4F4 1720 aa13.01□□□□□ -0.33
PTPN2-203ENST00000353319 NEURL1BA8MQ27 555 aa13.01□□□□□ -0.33
PTPN2-203ENST00000353319 NBPF26B4DH59 902 aa13.01□□□□□ -0.33
PTPN2-203ENST00000353319 RBM25P49756 843 aaKnown RBP13.01□□□□□ -0.33
PTPN2-203ENST00000353319 NBPF14Q5TI25 921 aa13.01□□□□□ -0.33
PTPN2-203ENST00000353319 NBPF10Q6P3W6 841 aaKnown RBP13.01□□□□□ -0.33
PTPN2-203ENST00000353319 TBC1D9Q6ZT07 1266 aa13.01□□□□□ -0.33
PTPN2-203ENST00000353319 NBPF15Q8N660 670 aa13.01□□□□□ -0.33
PTPN2-203ENST00000353319 OTUD7AQ8TE49 926 aaPredicted RBP13.01□□□□□ -0.33
PTPN2-203ENST00000353319 COL15A1P39059 1388 aa13.01□□□□□ -0.33
PTPN2-203ENST00000353319 AOX1Q06278 1338 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms