RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 PDIA6Q15084 440 aa23.05■■□□□ 1.28
TRIM41-202ENST00000351937 KSR2Q6VAB6 950 aa23.05■■□□□ 1.28
TRIM41-202ENST00000351937 TOM1O60784 492 aa23.05■■□□□ 1.28
TRIM41-202ENST00000351937 UBTFL1P0CB47 393 aaPredicted RBP23.05■■□□□ 1.28
TRIM41-202ENST00000351937 DDX54Q8TDD1 881 aaKnown RBP23.05■■□□□ 1.28
TRIM41-202ENST00000351937 COL16A1Q07092 1604 aaPredicted RBP23.04■■□□□ 1.28
TRIM41-202ENST00000351937 SHANK3Q9BYB0 1731 aa23.04■■□□□ 1.28
TRIM41-202ENST00000351937 DDX58O95786 925 aaKnown RBP23.04■■□□□ 1.28
TRIM41-202ENST00000351937 USP35Q9P2H5 1018 aa23.04■■□□□ 1.28
TRIM41-202ENST00000351937 C5P01031 1676 aa23.03■■□□□ 1.28
TRIM41-202ENST00000351937 PHLPP1O60346 1717 aa23.03■■□□□ 1.28
TRIM41-202ENST00000351937 ATP8B2P98198 1209 aa23.03■■□□□ 1.28
TRIM41-202ENST00000351937 MAP3K2Q9Y2U5 619 aa23.02■■□□□ 1.28
TRIM41-202ENST00000351937 LRRFIP2Q9Y608 721 aaKnown RBP23.02■■□□□ 1.28
TRIM41-202ENST00000351937 BMP2KLQ5H9B9 411 aa23.01■■□□□ 1.27
TRIM41-202ENST00000351937 ALDH1L1O75891 902 aa23.01■■□□□ 1.27
TRIM41-202ENST00000351937 SEC24BO95487 1268 aa23.01■■□□□ 1.27
TRIM41-202ENST00000351937 USP16Q9Y5T5 823 aa23■■□□□ 1.27
TRIM41-202ENST00000351937 DDRGK1Q96HY6 314 aa23■■□□□ 1.27
TRIM41-202ENST00000351937 DISP2A7MBM2 1401 aa22.99■■□□□ 1.27
TRIM41-202ENST00000351937 UPF2Q9HAU5 1272 aaKnown RBP22.98■■□□□ 1.27
TRIM41-202ENST00000351937 PNMA6EA0A0J9YXQ4 647 aa22.97■■□□□ 1.27
TRIM41-202ENST00000351937 GLI3P10071 1580 aa22.97■■□□□ 1.27
TRIM41-202ENST00000351937 NBPF7P0C2Y1 421 aaPredicted RBP22.96■■□□□ 1.27
TRIM41-202ENST00000351937 MYL6BP14649 208 aa22.96■■□□□ 1.27
TRIM41-202ENST00000351937 AIMP1Q12904 312 aaKnown RBP22.96■■□□□ 1.27
TRIM41-202ENST00000351937 PLEKHM2Q8IWE5 1019 aa22.96■■□□□ 1.27
TRIM41-202ENST00000351937 LINS1Q8NG48 757 aa22.96■■□□□ 1.27
TRIM41-202ENST00000351937 PIP4K2BP78356 416 aa22.96■■□□□ 1.27
TRIM41-202ENST00000351937 HDAC5Q9UQL6 1122 aa22.96■■□□□ 1.27
TRIM41-202ENST00000351937 ERBB4Q15303 1308 aa22.96■■□□□ 1.27
TRIM41-202ENST00000351937 LRP10Q7Z4F1 713 aa22.95■■□□□ 1.27
TRIM41-202ENST00000351937 UBR2Q8IWV8 1755 aa22.95■■□□□ 1.26
TRIM41-202ENST00000351937 PAPPAQ13219 1627 aa22.95■■□□□ 1.26
TRIM41-202ENST00000351937 PLCH1Q4KWH8 1693 aa22.95■■□□□ 1.26
TRIM41-202ENST00000351937 IBTKQ9P2D0 1353 aaPredicted RBP22.95■■□□□ 1.26
TRIM41-202ENST00000351937 RIC3Q7Z5B4 369 aa22.95■■□□□ 1.26
TRIM41-202ENST00000351937 SSH3Q8TE77 659 aa22.95■■□□□ 1.26
TRIM41-202ENST00000351937 XAGE3Q8WTP9 111 aa22.95■■□□□ 1.26
TRIM41-202ENST00000351937 LAMB4A4D0S4 1761 aa22.94■■□□□ 1.26
TRIM41-202ENST00000351937 COPS6Q7L5N1 327 aa22.94■■□□□ 1.26
TRIM41-202ENST00000351937 ADAMTS2O95450 1211 aa22.94■■□□□ 1.26
TRIM41-202ENST00000351937 TMOD3Q9NYL9 352 aa22.94■■□□□ 1.26
TRIM41-202ENST00000351937 KCPQ6ZWJ8 1503 aa22.93■■□□□ 1.26
TRIM41-202ENST00000351937 TNS2Q63HR2 1409 aa22.93■■□□□ 1.26
TRIM41-202ENST00000351937 C9orf78Q9NZ63 289 aaPredicted RBP22.93■■□□□ 1.26
TRIM41-202ENST00000351937 APBB1O00213 710 aa22.92■■□□□ 1.26
TRIM41-202ENST00000351937 SMARCA5O60264 1052 aaPredicted RBP22.92■■□□□ 1.26
TRIM41-202ENST00000351937 POLA2Q14181 598 aa22.92■■□□□ 1.26
TRIM41-202ENST00000351937 NBR1Q14596 966 aa22.92■■□□□ 1.26
TRIM41-202ENST00000351937 C16orf71Q8IYS4 520 aaPredicted RBP22.92■■□□□ 1.26
TRIM41-202ENST00000351937 EXOC6BQ9Y2D4 811 aa22.92■■□□□ 1.26
TRIM41-202ENST00000351937 EXOC5O00471 708 aa22.91■■□□□ 1.26
TRIM41-202ENST00000351937 NEXNQ0ZGT2 675 aa22.91■■□□□ 1.26
TRIM41-202ENST00000351937 ANKRD13DQ6ZTN6 518 aa22.91■■□□□ 1.26
TRIM41-202ENST00000351937 PPP1R42Q7Z4L9 355 aa22.91■■□□□ 1.26
TRIM41-202ENST00000351937 CDCA7Q9BWT1 371 aaPredicted RBP22.91■■□□□ 1.26
TRIM41-202ENST00000351937 TOGARAM1Q9Y4F4 1720 aa22.91■■□□□ 1.26
TRIM41-202ENST00000351937 CWF19L2Q2TBE0 894 aaKnown RBP22.91■■□□□ 1.26
TRIM41-202ENST00000351937 LRRCC1Q9C099 1032 aa22.91■■□□□ 1.26
TRIM41-202ENST00000351937 THRAP3Q9Y2W1 955 aaKnown RBP22.91■■□□□ 1.26
TRIM41-202ENST00000351937 UTYO14607 1347 aa22.9■■□□□ 1.26
TRIM41-202ENST00000351937 METTL22Q9BUU2 404 aaPredicted RBP22.9■■□□□ 1.26
TRIM41-202ENST00000351937 UBAP1LF5GYI3 381 aa22.89■■□□□ 1.25
TRIM41-202ENST00000351937 MTX1Q13505 466 aa22.89■■□□□ 1.25
TRIM41-202ENST00000351937 TTC22Q5TAA0 569 aa22.89■■□□□ 1.25
TRIM41-202ENST00000351937 TBC1D32Q96NH3 1257 aa22.89■■□□□ 1.25
TRIM41-202ENST00000351937 GRM8O00222 908 aa22.88■■□□□ 1.25
TRIM41-202ENST00000351937 SRGAP3O43295 1099 aa22.88■■□□□ 1.25
TRIM41-202ENST00000351937 PTCD1O75127 700 aaKnown RBP22.88■■□□□ 1.25
TRIM41-202ENST00000351937 IGKV5-2P06315 115 aa22.88■■□□□ 1.25
TRIM41-202ENST00000351937 DEKP35659 375 aaKnown RBP22.88■■□□□ 1.25
TRIM41-202ENST00000351937 NRAPQ86VF7 1730 aa22.88■■□□□ 1.25
TRIM41-202ENST00000351937 SPATA31A1Q5TZJ5 1347 aa22.88■■□□□ 1.25
TRIM41-202ENST00000351937 RAB11FIP3O75154 756 aa22.87■■□□□ 1.25
TRIM41-202ENST00000351937 OTUD7AQ8TE49 926 aaPredicted RBP22.87■■□□□ 1.25
TRIM41-202ENST00000351937 PIGBQ92521 554 aa22.87■■□□□ 1.25
TRIM41-202ENST00000351937 OSBPL3Q9H4L5 887 aa22.87■■□□□ 1.25
TRIM41-202ENST00000351937 NUTM2BA6NNL0 878 aaPredicted RBP22.87■■□□□ 1.25
TRIM41-202ENST00000351937 NUTM2EB1AL46 878 aaPredicted RBP22.87■■□□□ 1.25
TRIM41-202ENST00000351937 GSPT1P15170 499 aaKnown RBP22.87■■□□□ 1.25
TRIM41-202ENST00000351937 NUTM2AQ8IVF1 878 aaPredicted RBP22.87■■□□□ 1.25
TRIM41-202ENST00000351937 WNK3Q9BYP7 1800 aa22.87■■□□□ 1.25
TRIM41-202ENST00000351937 LRP6O75581 1613 aa22.86■■□□□ 1.25
TRIM41-202ENST00000351937 PIP4K2AP48426 406 aaPredicted RBP22.86■■□□□ 1.25
TRIM41-202ENST00000351937 NEURL1BA8MQ27 555 aa22.86■■□□□ 1.25
TRIM41-202ENST00000351937 NBPF26B4DH59 902 aa22.85■■□□□ 1.25
TRIM41-202ENST00000351937 NBPF14Q5TI25 921 aa22.85■■□□□ 1.25
TRIM41-202ENST00000351937 NBPF10Q6P3W6 841 aaKnown RBP22.85■■□□□ 1.25
TRIM41-202ENST00000351937 VSIG10Q8N0Z9 540 aa22.85■■□□□ 1.25
TRIM41-202ENST00000351937 NBPF15Q8N660 670 aa22.85■■□□□ 1.25
TRIM41-202ENST00000351937 PLBD2Q8NHP8 589 aa22.85■■□□□ 1.25
TRIM41-202ENST00000351937 MYD88Q99836 296 aa22.85■■□□□ 1.25
TRIM41-202ENST00000351937 SURF6O75683 361 aaKnown RBP22.85■■□□□ 1.25
TRIM41-202ENST00000351937 MFAP1P55081 439 aaKnown RBP22.85■■□□□ 1.25
TRIM41-202ENST00000351937 GCKRQ14397 625 aa22.84■■□□□ 1.25
TRIM41-202ENST00000351937 HSP90AB4PQ58FF6 505 aa22.84■■□□□ 1.25
TRIM41-202ENST00000351937 TEX13AQ9BXU3 409 aaPredicted RBP22.84■■□□□ 1.25
TRIM41-202ENST00000351937 NWD2Q9ULI1 1742 aa22.83■■□□□ 1.25
TRIM41-202ENST00000351937 CDC45O75419 566 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms