RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 GOLGA6L6A8MZA4 724 aa17.97■□□□□ 0.47
TRAF3-202ENST00000351691 EPB41L2O43491 1005 aaKnown RBP17.97■□□□□ 0.47
TRAF3-202ENST00000351691 GTF2E1P29083 439 aaPredicted RBP17.97■□□□□ 0.47
TRAF3-202ENST00000351691 BBXQ8WY36 941 aaPredicted RBP17.97■□□□□ 0.47
TRAF3-202ENST00000351691 DIP2AQ14689 1571 aa17.97■□□□□ 0.47
TRAF3-202ENST00000351691 RPAP1Q9BWH6 1393 aaPredicted RBP17.97■□□□□ 0.47
TRAF3-202ENST00000351691 PTPRCP08575 1304 aa17.96■□□□□ 0.47
TRAF3-202ENST00000351691 FAM83GA6ND36 823 aa17.96■□□□□ 0.47
TRAF3-202ENST00000351691 GADD45BO75293 160 aaPredicted RBP17.96■□□□□ 0.47
TRAF3-202ENST00000351691 FOXD4L5Q5VV16 416 aaPredicted RBP17.96■□□□□ 0.47
TRAF3-202ENST00000351691 CEP85Q6P2H3 762 aa17.96■□□□□ 0.47
TRAF3-202ENST00000351691 FOXD4L4Q8WXT5 416 aaPredicted RBP17.96■□□□□ 0.47
TRAF3-202ENST00000351691 TBX22Q9Y458 520 aa17.96■□□□□ 0.47
TRAF3-202ENST00000351691 PTPRUQ92729 1446 aa17.96■□□□□ 0.46
TRAF3-202ENST00000351691 FMN2Q9NZ56 1722 aa17.95■□□□□ 0.46
TRAF3-202ENST00000351691 FUCA2Q9BTY2 467 aa17.95■□□□□ 0.46
TRAF3-202ENST00000351691 U2AF2P26368 475 aaKnown RBP eCLIP17.95■□□□□ 0.46
TRAF3-202ENST00000351691 UBE2HP62256 183 aa17.95■□□□□ 0.46
TRAF3-202ENST00000351691 C17orf53Q8N3J3 647 aaPredicted RBP17.95■□□□□ 0.46
TRAF3-202ENST00000351691 OTUD7AQ8TE49 926 aaPredicted RBP17.95■□□□□ 0.46
TRAF3-202ENST00000351691 SPDYE4A6NLX3 237 aa17.94■□□□□ 0.46
TRAF3-202ENST00000351691 DCTN1Q14203 1278 aa17.94■□□□□ 0.46
TRAF3-202ENST00000351691 AEBP1Q8IUX7 1158 aa17.94■□□□□ 0.46
TRAF3-202ENST00000351691 CRB1P82279 1406 aa17.93■□□□□ 0.46
TRAF3-202ENST00000351691 HCLS1P14317 486 aaPredicted RBP17.93■□□□□ 0.46
TRAF3-202ENST00000351691 KCNF1Q9H3M0 494 aa17.93■□□□□ 0.46
TRAF3-202ENST00000351691 SBNO1A3KN83 1393 aa17.93■□□□□ 0.46
TRAF3-202ENST00000351691 FAM193AP78312 1265 aa17.92■□□□□ 0.46
TRAF3-202ENST00000351691 ESYT1Q9BSJ8 1104 aa17.92■□□□□ 0.46
TRAF3-202ENST00000351691 TMEM51Q9NW97 253 aa17.92■□□□□ 0.46
TRAF3-202ENST00000351691 CGNQ9P2M7 1197 aaKnown RBP17.92■□□□□ 0.46
TRAF3-202ENST00000351691 TCHHQ07283 1943 aa17.92■□□□□ 0.46
TRAF3-202ENST00000351691 PYCARDQ9ULZ3 195 aa17.92■□□□□ 0.46
TRAF3-202ENST00000351691 FLT4P35916 1363 aa17.92■□□□□ 0.46
TRAF3-202ENST00000351691 FAM177BA6PVY3 158 aa17.91■□□□□ 0.46
TRAF3-202ENST00000351691 SMTNL1A8MU46 457 aa17.91■□□□□ 0.46
TRAF3-202ENST00000351691 CTNNA3Q9UI47 895 aa17.91■□□□□ 0.46
TRAF3-202ENST00000351691 MORC2Q9Y6X9 1032 aaPredicted RBP17.91■□□□□ 0.46
TRAF3-202ENST00000351691 PDE1AP54750 535 aa17.9■□□□□ 0.46
TRAF3-202ENST00000351691 NCBP1Q09161 790 aaKnown RBP17.9■□□□□ 0.46
TRAF3-202ENST00000351691 HSP90AB2PQ58FF8 381 aa17.9■□□□□ 0.46
TRAF3-202ENST00000351691 ZNF771Q7L3S4 317 aaPredicted RBP17.9■□□□□ 0.46
TRAF3-202ENST00000351691 DDX41Q9UJV9 622 aaKnown RBP17.9■□□□□ 0.46
TRAF3-202ENST00000351691 KDRP35968 1356 aa17.9■□□□□ 0.46
TRAF3-202ENST00000351691 XRN1Q8IZH2 1706 aaKnown RBP17.9■□□□□ 0.46
TRAF3-202ENST00000351691 HTATSF1O43719 755 aaKnown RBP17.9■□□□□ 0.46
TRAF3-202ENST00000351691 SMARCA5O60264 1052 aaPredicted RBP17.9■□□□□ 0.46
TRAF3-202ENST00000351691 HMMRO75330 724 aa17.9■□□□□ 0.46
TRAF3-202ENST00000351691 AMOTL2Q9Y2J4 779 aa17.9■□□□□ 0.46
TRAF3-202ENST00000351691 ANKARQ7Z5J8 1434 aa17.89■□□□□ 0.46
TRAF3-202ENST00000351691 MPNDQ8N594 471 aa17.89■□□□□ 0.45
TRAF3-202ENST00000351691 SRCIN1Q9C0H9 1055 aa17.89■□□□□ 0.45
TRAF3-202ENST00000351691 ATP6V1DQ9Y5K8 247 aa17.89■□□□□ 0.45
TRAF3-202ENST00000351691 PDE4CQ08493 712 aa17.88■□□□□ 0.45
TRAF3-202ENST00000351691 USP54Q70EL1 1684 aa17.88■□□□□ 0.45
TRAF3-202ENST00000351691 MAP3K19Q56UN5 1328 aa17.88■□□□□ 0.45
TRAF3-202ENST00000351691 ZBTB7CA1YPR0 619 aa17.88■□□□□ 0.45
TRAF3-202ENST00000351691 GDPD2Q9HCC8 539 aa17.88■□□□□ 0.45
TRAF3-202ENST00000351691 PAXBP1Q9Y5B6 917 aa17.88■□□□□ 0.45
TRAF3-202ENST00000351691 CHD2O14647 1828 aaKnown RBP17.88■□□□□ 0.45
TRAF3-202ENST00000351691 CCDC66A2RUB6 948 aa17.87■□□□□ 0.45
TRAF3-202ENST00000351691 SLFN14P0C7P3 912 aa17.87■□□□□ 0.45
TRAF3-202ENST00000351691 ZSCAN22P10073 491 aaPredicted RBP17.87■□□□□ 0.45
TRAF3-202ENST00000351691 MCM10Q7L590 875 aa17.87■□□□□ 0.45
TRAF3-202ENST00000351691 CREBRFQ8IUR6 639 aa17.87■□□□□ 0.45
TRAF3-202ENST00000351691 RTF1Q92541 710 aaKnown RBP17.87■□□□□ 0.45
TRAF3-202ENST00000351691 SOS1Q07889 1333 aaPredicted RBP17.87■□□□□ 0.45
TRAF3-202ENST00000351691 IGSF1Q8N6C5 1336 aa17.87■□□□□ 0.45
TRAF3-202ENST00000351691 SALL3Q9BXA9 1300 aa17.87■□□□□ 0.45
TRAF3-202ENST00000351691 RGPD8O14715 1765 aaPredicted RBP17.86■□□□□ 0.45
TRAF3-202ENST00000351691 PALD1Q9ULE6 856 aa17.86■□□□□ 0.45
TRAF3-202ENST00000351691 AP5Z1O43299 807 aa17.85■□□□□ 0.45
TRAF3-202ENST00000351691 SLC20A2Q08357 652 aa17.85■□□□□ 0.45
TRAF3-202ENST00000351691 NGDNQ8NEJ9 315 aaKnown RBP17.85■□□□□ 0.45
TRAF3-202ENST00000351691 CCT4P50991 539 aaKnown RBP17.84■□□□□ 0.45
TRAF3-202ENST00000351691 ANKLE2Q86XL3 938 aa17.84■□□□□ 0.45
TRAF3-202ENST00000351691 CNPY2Q9Y2B0 182 aa17.84■□□□□ 0.45
TRAF3-202ENST00000351691 LRRC37A3O60309 1634 aa17.84■□□□□ 0.45
TRAF3-202ENST00000351691 PIK3C2AO00443 1686 aa17.84■□□□□ 0.45
TRAF3-202ENST00000351691 CCDC192P0DO97 292 aa17.84■□□□□ 0.45
TRAF3-202ENST00000351691 CHMLP26374 656 aa17.84■□□□□ 0.45
TRAF3-202ENST00000351691 MTHFSDQ2M296 383 aaKnown RBP17.84■□□□□ 0.45
TRAF3-202ENST00000351691 MSH6P52701 1360 aa17.84■□□□□ 0.45
TRAF3-202ENST00000351691 BABAM1Q9NWV8 329 aa17.83■□□□□ 0.45
TRAF3-202ENST00000351691 NUTM2FA1L443 756 aa17.83■□□□□ 0.44
TRAF3-202ENST00000351691 AMPHP49418 695 aa17.83■□□□□ 0.44
TRAF3-202ENST00000351691 KRT24Q2M2I5 525 aa17.83■□□□□ 0.44
TRAF3-202ENST00000351691 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.83■□□□□ 0.44
TRAF3-202ENST00000351691 FAM53CQ9NYF3 392 aa17.83■□□□□ 0.44
TRAF3-202ENST00000351691 TSPYL4Q9UJ04 414 aa17.83■□□□□ 0.44
TRAF3-202ENST00000351691 AOX1Q06278 1338 aa17.82■□□□□ 0.44
TRAF3-202ENST00000351691 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.82■□□□□ 0.44
TRAF3-202ENST00000351691 F13A1P00488 732 aa17.82■□□□□ 0.44
TRAF3-202ENST00000351691 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
TRAF3-202ENST00000351691 TERF2Q15554 542 aa17.82■□□□□ 0.44
TRAF3-202ENST00000351691 KIF18AQ8NI77 898 aa17.82■□□□□ 0.44
TRAF3-202ENST00000351691 IPO4Q8TEX9 1081 aaKnown RBP17.82■□□□□ 0.44
TRAF3-202ENST00000351691 STX6O43752 255 aa17.81■□□□□ 0.44
TRAF3-202ENST00000351691 HSPA4P34932 840 aa17.81■□□□□ 0.44
TRAF3-202ENST00000351691 KRT222Q8N1A0 295 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms