RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 AEBP2Q6ZN18 517 aaPredicted RBP17.73■□□□□ 0.43
COG3-201ENST00000349995 ZGPATQ8N5A5 531 aaKnown RBP17.73■□□□□ 0.43
COG3-201ENST00000349995 USHBP1Q8N6Y0 703 aa17.73■□□□□ 0.43
COG3-201ENST00000349995 SMARCC1Q92922 1105 aaPredicted RBP17.73■□□□□ 0.43
COG3-201ENST00000349995 MAST1Q9Y2H9 1570 aa17.73■□□□□ 0.43
COG3-201ENST00000349995 CPLX1O14810 134 aa17.72■□□□□ 0.43
COG3-201ENST00000349995 PHACTR2O75167 634 aa17.72■□□□□ 0.43
COG3-201ENST00000349995 NAP1L1P55209 391 aaKnown RBP17.72■□□□□ 0.43
COG3-201ENST00000349995 ANKRD20A12PQ8NF67 263 aa17.72■□□□□ 0.43
COG3-201ENST00000349995 ZNF445P59923 1031 aa17.72■□□□□ 0.43
COG3-201ENST00000349995 MEX3CQ5U5Q3 659 aaKnown RBP17.72■□□□□ 0.43
COG3-201ENST00000349995 DDX11Q96FC9 970 aa17.72■□□□□ 0.43
COG3-201ENST00000349995 ACEP12821 1306 aa17.72■□□□□ 0.43
COG3-201ENST00000349995 KDM2BQ8NHM5 1336 aa17.72■□□□□ 0.43
COG3-201ENST00000349995 TTC37Q6PGP7 1564 aa17.71■□□□□ 0.43
COG3-201ENST00000349995 USP48Q86UV5 1035 aa17.71■□□□□ 0.43
COG3-201ENST00000349995 ARHGEF5Q12774 1597 aa17.71■□□□□ 0.43
COG3-201ENST00000349995 CFAP100Q494V2 611 aa17.71■□□□□ 0.43
COG3-201ENST00000349995 HSP90AB2PQ58FF8 381 aa17.71■□□□□ 0.43
COG3-201ENST00000349995 ZNF530Q6P9A1 599 aaPredicted RBP17.71■□□□□ 0.43
COG3-201ENST00000349995 FAM107BQ9H098 131 aa17.71■□□□□ 0.43
COG3-201ENST00000349995 DNAI1Q9UI46 699 aa17.71■□□□□ 0.43
COG3-201ENST00000349995 ADGBQ8N7X0 1667 aa17.71■□□□□ 0.43
COG3-201ENST00000349995 FOXO3O43524 673 aa17.71■□□□□ 0.43
COG3-201ENST00000349995 SURF6O75683 361 aaKnown RBP17.71■□□□□ 0.43
COG3-201ENST00000349995 NF2P35240 595 aa17.71■□□□□ 0.43
COG3-201ENST00000349995 ZC3H6P61129 1189 aaKnown RBP17.71■□□□□ 0.43
COG3-201ENST00000349995 DYDC1Q8WWB3 177 aa17.71■□□□□ 0.43
COG3-201ENST00000349995 EIF2AK4Q9P2K8 1649 aaKnown RBP17.71■□□□□ 0.42
COG3-201ENST00000349995 AKAP17AQ02040 695 aaKnown RBP17.7■□□□□ 0.42
COG3-201ENST00000349995 CCDC83Q8IWF9 413 aa17.7■□□□□ 0.42
COG3-201ENST00000349995 PPP6R1Q9UPN7 881 aa17.7■□□□□ 0.42
COG3-201ENST00000349995 POGZQ7Z3K3 1410 aa17.7■□□□□ 0.42
COG3-201ENST00000349995 ELF2Q15723 593 aa17.7■□□□□ 0.42
COG3-201ENST00000349995 BMP2KLQ5H9B9 411 aa17.7■□□□□ 0.42
COG3-201ENST00000349995 MYCBPQ99417 103 aaPredicted RBP17.7■□□□□ 0.42
COG3-201ENST00000349995 POLKQ9UBT6 870 aa17.7■□□□□ 0.42
COG3-201ENST00000349995 MAP4K4O95819 1239 aaPredicted RBP17.7■□□□□ 0.42
COG3-201ENST00000349995 TFIP11Q9UBB9 837 aaKnown RBP17.7■□□□□ 0.42
COG3-201ENST00000349995 NSD2O96028 1365 aa17.69■□□□□ 0.42
COG3-201ENST00000349995 GTF2E1P29083 439 aaPredicted RBP17.69■□□□□ 0.42
COG3-201ENST00000349995 POLR3AO14802 1390 aaPredicted RBP17.69■□□□□ 0.42
COG3-201ENST00000349995 NEK11Q8NG66 645 aa17.69■□□□□ 0.42
COG3-201ENST00000349995 DDX54Q8TDD1 881 aaKnown RBP17.69■□□□□ 0.42
COG3-201ENST00000349995 A0A1W2PP64 1363 aa17.69■□□□□ 0.42
COG3-201ENST00000349995 NEMFO60524 1076 aa17.68■□□□□ 0.42
COG3-201ENST00000349995 KDM4AO75164 1064 aa17.68■□□□□ 0.42
COG3-201ENST00000349995 CCDC171Q6TFL3 1326 aa17.68■□□□□ 0.42
COG3-201ENST00000349995 GNAI3P08754 354 aa17.68■□□□□ 0.42
COG3-201ENST00000349995 IFIT2P09913 472 aaKnown RBP17.68■□□□□ 0.42
COG3-201ENST00000349995 UBE2HP62256 183 aa17.68■□□□□ 0.42
COG3-201ENST00000349995 KIF4BQ2VIQ3 1234 aa17.68■□□□□ 0.42
COG3-201ENST00000349995 RIC3Q7Z5B4 369 aa17.68■□□□□ 0.42
COG3-201ENST00000349995 JARID2Q92833 1246 aaPredicted RBP17.68■□□□□ 0.42
COG3-201ENST00000349995 VPS18Q9P253 973 aa17.68■□□□□ 0.42
COG3-201ENST00000349995 PLA2R1Q13018 1463 aa17.68■□□□□ 0.42
COG3-201ENST00000349995 RLBP1P12271 317 aa17.68■□□□□ 0.42
COG3-201ENST00000349995 CASQ1P31415 396 aa17.68■□□□□ 0.42
COG3-201ENST00000349995 PLEKHO1Q53GL0 409 aaPredicted RBP17.68■□□□□ 0.42
COG3-201ENST00000349995 SMARCA5O60264 1052 aaPredicted RBP17.68■□□□□ 0.42
COG3-201ENST00000349995 STK38Q15208 465 aa17.68■□□□□ 0.42
COG3-201ENST00000349995 SYTL4Q96C24 671 aaPredicted RBP17.68■□□□□ 0.42
COG3-201ENST00000349995 GBP3Q9H0R5 595 aa17.68■□□□□ 0.42
COG3-201ENST00000349995 CNPY2Q9Y2B0 182 aa17.68■□□□□ 0.42
COG3-201ENST00000349995 F6X3S4 739 aa17.67■□□□□ 0.42
COG3-201ENST00000349995 DDX58O95786 925 aaKnown RBP17.67■□□□□ 0.42
COG3-201ENST00000349995 MX1P20591 662 aa17.67■□□□□ 0.42
COG3-201ENST00000349995 TMX3Q96JJ7 454 aa17.67■□□□□ 0.42
COG3-201ENST00000349995 CYP46A1Q9Y6A2 500 aa17.67■□□□□ 0.42
COG3-201ENST00000349995 CEP57Q86XR8 500 aa17.67■□□□□ 0.42
COG3-201ENST00000349995 HOOK1Q9UJC3 728 aaKnown RBP17.67■□□□□ 0.42
COG3-201ENST00000349995 TNRQ92752 1358 aa17.67■□□□□ 0.42
COG3-201ENST00000349995 GNAI2P04899 355 aa17.66■□□□□ 0.42
COG3-201ENST00000349995 TMC6Q7Z403 805 aa17.66■□□□□ 0.42
COG3-201ENST00000349995 ATP2B3Q16720 1220 aa17.66■□□□□ 0.42
COG3-201ENST00000349995 ABCC11Q96J66 1382 aa17.66■□□□□ 0.42
COG3-201ENST00000349995 PHACTR3Q96KR7 559 aa17.66■□□□□ 0.42
COG3-201ENST00000349995 MBIPQ9NS73 344 aa17.66■□□□□ 0.42
COG3-201ENST00000349995 PIK3C2GO75747 1445 aa17.66■□□□□ 0.42
COG3-201ENST00000349995 CASTP20810 708 aaKnown RBP17.66■□□□□ 0.42
COG3-201ENST00000349995 BRD2P25440 801 aaKnown RBP17.66■□□□□ 0.42
COG3-201ENST00000349995 GBP6Q6ZN66 633 aa17.66■□□□□ 0.42
COG3-201ENST00000349995 FAM200AQ8TCP9 573 aa17.66■□□□□ 0.42
COG3-201ENST00000349995 NPATQ14207 1427 aa17.66■□□□□ 0.42
COG3-201ENST00000349995 RIMS2Q9UQ26 1411 aa17.66■□□□□ 0.42
COG3-201ENST00000349995 ATP10AO60312 1499 aa17.65■□□□□ 0.42
COG3-201ENST00000349995 GNG11P61952 73 aa17.65■□□□□ 0.42
COG3-201ENST00000349995 TMEM63CQ9P1W3 806 aa17.65■□□□□ 0.42
COG3-201ENST00000349995 ZSCAN12O43309 604 aa17.65■□□□□ 0.42
COG3-201ENST00000349995 DHX8Q14562 1220 aaKnown RBP17.65■□□□□ 0.42
COG3-201ENST00000349995 UHRF1BP1LA0JNW5 1464 aa17.65■□□□□ 0.42
COG3-201ENST00000349995 LIG1P18858 919 aa17.65■□□□□ 0.42
COG3-201ENST00000349995 GBP2P32456 591 aaPredicted RBP17.65■□□□□ 0.42
COG3-201ENST00000349995 G3BP1Q13283 466 aaKnown RBP eCLIP17.65■□□□□ 0.42
COG3-201ENST00000349995 ZSCAN26Q16670 478 aa17.65■□□□□ 0.42
COG3-201ENST00000349995 RNF216Q9NWF9 866 aaPredicted RBP17.65■□□□□ 0.42
COG3-201ENST00000349995 ANO6Q4KMQ2 910 aa17.64■□□□□ 0.41
COG3-201ENST00000349995 PPFIBP1Q86W92 1011 aa17.64■□□□□ 0.41
COG3-201ENST00000349995 JAKMIP1Q96N16 626 aaKnown RBP17.64■□□□□ 0.41
COG3-201ENST00000349995 PSMA5P28066 241 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms