RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 CCDC192P0DO97 292 aa19.3■□□□□ 0.68
MBD1-204ENST00000347968 CCDC191Q8NCU4 936 aa19.3■□□□□ 0.68
MBD1-204ENST00000347968 TSPYL1Q9H0U9 437 aa19.3■□□□□ 0.68
MBD1-204ENST00000347968 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.3■□□□□ 0.68
MBD1-204ENST00000347968 TRHP20396 242 aaPredicted RBP19.29■□□□□ 0.68
MBD1-204ENST00000347968 NOP2P46087 812 aaKnown RBP19.29■□□□□ 0.68
MBD1-204ENST00000347968 SMARCE1Q969G3 411 aa19.29■□□□□ 0.68
MBD1-204ENST00000347968 FAM53CQ9NYF3 392 aa19.29■□□□□ 0.68
MBD1-204ENST00000347968 RPGRIP1LQ68CZ1 1315 aa19.29■□□□□ 0.68
MBD1-204ENST00000347968 MYO1CO00159 1063 aa19.29■□□□□ 0.68
MBD1-204ENST00000347968 PLA2G4AP47712 749 aa19.29■□□□□ 0.68
MBD1-204ENST00000347968 PTPN14Q15678 1187 aa19.29■□□□□ 0.68
MBD1-204ENST00000347968 ANO6Q4KMQ2 910 aa19.29■□□□□ 0.68
MBD1-204ENST00000347968 MRPL50Q8N5N7 158 aaKnown RBP19.29■□□□□ 0.68
MBD1-204ENST00000347968 DCTPP1Q9H773 170 aa19.29■□□□□ 0.68
MBD1-204ENST00000347968 CLIP2Q9UDT6 1046 aa19.29■□□□□ 0.68
MBD1-204ENST00000347968 LRRFIP2Q9Y608 721 aaKnown RBP19.29■□□□□ 0.68
MBD1-204ENST00000347968 FHOD1Q9Y613 1164 aa19.29■□□□□ 0.68
MBD1-204ENST00000347968 RILPL2Q969X0 211 aa19.28■□□□□ 0.68
MBD1-204ENST00000347968 PLEKHF1Q96S99 279 aa19.28■□□□□ 0.68
MBD1-204ENST00000347968 MYO5BQ9ULV0 1848 aa19.28■□□□□ 0.68
MBD1-204ENST00000347968 CLCN6P51797 869 aa19.28■□□□□ 0.68
MBD1-204ENST00000347968 ESF1Q9H501 851 aaKnown RBP19.28■□□□□ 0.68
MBD1-204ENST00000347968 CBX8Q9HC52 389 aa19.28■□□□□ 0.68
MBD1-204ENST00000347968 PIK3C2BO00750 1634 aa19.28■□□□□ 0.68
MBD1-204ENST00000347968 RPAP1Q9BWH6 1393 aaPredicted RBP19.28■□□□□ 0.68
MBD1-204ENST00000347968 SEC31AO94979 1220 aaKnown RBP19.28■□□□□ 0.68
MBD1-204ENST00000347968 MRVI1Q9Y6F6 885 aa19.28■□□□□ 0.68
MBD1-204ENST00000347968 PREX1Q8TCU6 1659 aa19.27■□□□□ 0.68
MBD1-204ENST00000347968 NEXMIFQ5QGS0 1516 aa19.27■□□□□ 0.68
MBD1-204ENST00000347968 FILIP1Q7Z7B0 1213 aa19.27■□□□□ 0.68
MBD1-204ENST00000347968 FAM200AQ8TCP9 573 aa19.27■□□□□ 0.68
MBD1-204ENST00000347968 SIRT1Q96EB6 747 aa19.27■□□□□ 0.68
MBD1-204ENST00000347968 KIAA1210Q9ULL0 1709 aa19.27■□□□□ 0.68
MBD1-204ENST00000347968 CLTCQ00610 1675 aaKnown RBP19.27■□□□□ 0.68
MBD1-204ENST00000347968 ZSCAN22P10073 491 aaPredicted RBP19.27■□□□□ 0.68
MBD1-204ENST00000347968 CPA1P15085 419 aa19.27■□□□□ 0.68
MBD1-204ENST00000347968 SYT1P21579 422 aa19.27■□□□□ 0.68
MBD1-204ENST00000347968 TYRO3Q06418 890 aa19.27■□□□□ 0.68
MBD1-204ENST00000347968 SART3Q15020 963 aaKnown RBP19.27■□□□□ 0.68
MBD1-204ENST00000347968 GGNBP2Q9H3C7 697 aa19.27■□□□□ 0.68
MBD1-204ENST00000347968 PNMA6AP0CW24 399 aaPredicted RBP19.26■□□□□ 0.67
MBD1-204ENST00000347968 FERMT3Q86UX7 667 aa19.26■□□□□ 0.67
MBD1-204ENST00000347968 DRC1Q96MC2 740 aa19.26■□□□□ 0.67
MBD1-204ENST00000347968 KDM5AP29375 1690 aaKnown RBP19.26■□□□□ 0.67
MBD1-204ENST00000347968 ANKRD65E5RJM6 399 aa19.26■□□□□ 0.67
MBD1-204ENST00000347968 LIG1P18858 919 aa19.26■□□□□ 0.67
MBD1-204ENST00000347968 ZNF75DP51815 510 aa19.26■□□□□ 0.67
MBD1-204ENST00000347968 BMS1Q14692 1282 aaKnown RBP19.26■□□□□ 0.67
MBD1-204ENST00000347968 ZC3H13Q5T200 1668 aaKnown RBP19.26■□□□□ 0.67
MBD1-204ENST00000347968 A0A087WWV3 80 aa19.26■□□□□ 0.67
MBD1-204ENST00000347968 EPC1Q9H2F5 836 aa19.26■□□□□ 0.67
MBD1-204ENST00000347968 VPS37CA5D8V6 355 aaPredicted RBP19.25■□□□□ 0.67
MBD1-204ENST00000347968 VAMP4O75379 141 aa19.25■□□□□ 0.67
MBD1-204ENST00000347968 FBLN1P23142 703 aa19.25■□□□□ 0.67
MBD1-204ENST00000347968 ALDH1L2Q3SY69 923 aa19.25■□□□□ 0.67
MBD1-204ENST00000347968 RNF216Q9NWF9 866 aaPredicted RBP19.25■□□□□ 0.67
MBD1-204ENST00000347968 ADGRB1O14514 1584 aa19.24■□□□□ 0.67
MBD1-204ENST00000347968 STX6O43752 255 aa19.24■□□□□ 0.67
MBD1-204ENST00000347968 DDX54Q8TDD1 881 aaKnown RBP19.24■□□□□ 0.67
MBD1-204ENST00000347968 ERO1AQ96HE7 468 aa19.24■□□□□ 0.67
MBD1-204ENST00000347968 CCDC34Q96HJ3 373 aa19.24■□□□□ 0.67
MBD1-204ENST00000347968 EFCC1Q9HA90 598 aa19.24■□□□□ 0.67
MBD1-204ENST00000347968 SLU7O95391 586 aaKnown RBP19.24■□□□□ 0.67
MBD1-204ENST00000347968 ARHGAP29Q52LW3 1261 aa19.23■□□□□ 0.67
MBD1-204ENST00000347968 INTS4Q96HW7 963 aaKnown RBP19.23■□□□□ 0.67
MBD1-204ENST00000347968 DNAJC25Q9H1X3 360 aa19.23■□□□□ 0.67
MBD1-204ENST00000347968 IL25Q9H293 177 aa19.23■□□□□ 0.67
MBD1-204ENST00000347968 USP16Q9Y5T5 823 aa19.23■□□□□ 0.67
MBD1-204ENST00000347968 ZSCAN26Q16670 478 aa19.23■□□□□ 0.67
MBD1-204ENST00000347968 F13A1P00488 732 aa19.23■□□□□ 0.67
MBD1-204ENST00000347968 SKILP12757 684 aa19.23■□□□□ 0.67
MBD1-204ENST00000347968 FBXW7Q969H0 707 aa19.23■□□□□ 0.67
MBD1-204ENST00000347968 CABP2Q9NPB3 220 aa19.23■□□□□ 0.67
MBD1-204ENST00000347968 KCNG1Q9UIX4 513 aa19.22■□□□□ 0.67
MBD1-204ENST00000347968 PTPRCP08575 1304 aa19.22■□□□□ 0.67
MBD1-204ENST00000347968 E2F4Q16254 413 aa19.22■□□□□ 0.67
MBD1-204ENST00000347968 TMEM87AQ8NBN3 555 aa19.22■□□□□ 0.67
MBD1-204ENST00000347968 MED14O60244 1454 aa19.21■□□□□ 0.67
MBD1-204ENST00000347968 PSEN1P49768 467 aa19.21■□□□□ 0.67
MBD1-204ENST00000347968 ESYT1Q9BSJ8 1104 aa19.21■□□□□ 0.67
MBD1-204ENST00000347968 CASQ1P31415 396 aa19.21■□□□□ 0.67
MBD1-204ENST00000347968 CEBPAP49715 358 aaPredicted RBP19.21■□□□□ 0.67
MBD1-204ENST00000347968 MCM2P49736 904 aa19.21■□□□□ 0.67
MBD1-204ENST00000347968 MAP3K11Q16584 847 aa19.21■□□□□ 0.67
MBD1-204ENST00000347968 RAD50Q92878 1312 aa19.21■□□□□ 0.67
MBD1-204ENST00000347968 NUP62CLQ9H1M0 184 aa19.21■□□□□ 0.67
MBD1-204ENST00000347968 TMEM131LA2VDJ0 1609 aa19.2■□□□□ 0.66
MBD1-204ENST00000347968 MAP4K4O95819 1239 aaPredicted RBP19.2■□□□□ 0.66
MBD1-204ENST00000347968 HMOX1P09601 288 aa19.2■□□□□ 0.66
MBD1-204ENST00000347968 MCCP23508 829 aa19.2■□□□□ 0.66
MBD1-204ENST00000347968 ICE2Q659A1 982 aa19.2■□□□□ 0.66
MBD1-204ENST00000347968 MINK1Q8N4C8 1332 aaPredicted RBP19.2■□□□□ 0.66
MBD1-204ENST00000347968 LARGE1O95461 756 aa19.2■□□□□ 0.66
MBD1-204ENST00000347968 GEMIN8Q9NWZ8 242 aaKnown RBP19.2■□□□□ 0.66
MBD1-204ENST00000347968 TEX35Q5T0J7 233 aa19.19■□□□□ 0.66
MBD1-204ENST00000347968 C8orf58Q8NAV2 365 aa19.19■□□□□ 0.66
MBD1-204ENST00000347968 DACT1Q9NYF0 836 aa19.19■□□□□ 0.66
MBD1-204ENST00000347968 ARHGEF40Q8TER5 1519 aa19.19■□□□□ 0.66
MBD1-204ENST00000347968 LRRC8AQ8IWT6 810 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms