RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 CDC45O75419 566 aa21.19■□□□□ 0.98
SMARCC2-202ENST00000347471 CHMP4AQ9BY43 222 aa21.19■□□□□ 0.98
SMARCC2-202ENST00000347471 RGPD2P0DJD1 1756 aa21.19■□□□□ 0.98
SMARCC2-202ENST00000347471 PA2G4Q9UQ80 394 aaKnown RBP21.19■□□□□ 0.98
SMARCC2-202ENST00000347471 ATP10DQ9P241 1426 aa21.18■□□□□ 0.98
SMARCC2-202ENST00000347471 ATP8B2P98198 1209 aa21.18■□□□□ 0.98
SMARCC2-202ENST00000347471 NEXNQ0ZGT2 675 aa21.18■□□□□ 0.98
SMARCC2-202ENST00000347471 IL2RBP14784 551 aa21.18■□□□□ 0.98
SMARCC2-202ENST00000347471 MED1Q15648 1581 aaPredicted RBP21.17■□□□□ 0.98
SMARCC2-202ENST00000347471 SDSP20132 328 aa21.17■□□□□ 0.98
SMARCC2-202ENST00000347471 MYT1Q01538 1121 aa21.17■□□□□ 0.98
SMARCC2-202ENST00000347471 RBM42Q9BTD8 480 aaKnown RBP21.17■□□□□ 0.98
SMARCC2-202ENST00000347471 BEND3Q5T5X7 828 aa21.17■□□□□ 0.98
SMARCC2-202ENST00000347471 TTC22Q5TAA0 569 aa21.17■□□□□ 0.98
SMARCC2-202ENST00000347471 FMNL2Q96PY5 1086 aa21.17■□□□□ 0.98
SMARCC2-202ENST00000347471 TBC1D2Q9BYX2 928 aa21.17■□□□□ 0.98
SMARCC2-202ENST00000347471 KSR2Q6VAB6 950 aa21.17■□□□□ 0.98
SMARCC2-202ENST00000347471 CASC1Q6TDU7 716 aa21.16■□□□□ 0.98
SMARCC2-202ENST00000347471 MARF1Q9Y4F3 1742 aaKnown RBP21.16■□□□□ 0.98
SMARCC2-202ENST00000347471 HSCBQ8IWL3 235 aa21.16■□□□□ 0.98
SMARCC2-202ENST00000347471 HYPKQ9NX55 129 aa21.16■□□□□ 0.98
SMARCC2-202ENST00000347471 WDR17Q8IZU2 1322 aa21.16■□□□□ 0.98
SMARCC2-202ENST00000347471 SNRPA1P09661 255 aaKnown RBP21.15■□□□□ 0.98
SMARCC2-202ENST00000347471 DDX21Q9NR30 783 aaKnown RBP eCLIP21.15■□□□□ 0.98
SMARCC2-202ENST00000347471 HSP90AB1P08238 724 aaKnown RBP21.15■□□□□ 0.98
SMARCC2-202ENST00000347471 DCCP43146 1447 aa21.15■□□□□ 0.98
SMARCC2-202ENST00000347471 STRCP1A6NGW2 1772 aa21.14■□□□□ 0.98
SMARCC2-202ENST00000347471 HOXB7P09629 217 aa21.14■□□□□ 0.97
SMARCC2-202ENST00000347471 KLHDC4Q8TBB5 520 aa21.14■□□□□ 0.97
SMARCC2-202ENST00000347471 SOS2Q07890 1332 aaPredicted RBP21.14■□□□□ 0.97
SMARCC2-202ENST00000347471 PDE1AP54750 535 aa21.14■□□□□ 0.97
SMARCC2-202ENST00000347471 ZBTB3Q9H5J0 574 aa21.14■□□□□ 0.97
SMARCC2-202ENST00000347471 SLIT3O75094 1523 aa21.13■□□□□ 0.97
SMARCC2-202ENST00000347471 A1BGP04217 495 aa21.13■□□□□ 0.97
SMARCC2-202ENST00000347471 MX1P20591 662 aa21.13■□□□□ 0.97
SMARCC2-202ENST00000347471 ANKRD13DQ6ZTN6 518 aa21.11■□□□□ 0.97
SMARCC2-202ENST00000347471 NOL8Q76FK4 1167 aaKnown RBP21.11■□□□□ 0.97
SMARCC2-202ENST00000347471 ADCY9O60503 1353 aa21.11■□□□□ 0.97
SMARCC2-202ENST00000347471 KDM6AO15550 1401 aaPredicted RBP21.11■□□□□ 0.97
SMARCC2-202ENST00000347471 NFKBIBQ15653 356 aa21.11■□□□□ 0.97
SMARCC2-202ENST00000347471 FRAT2O75474 233 aaPredicted RBP21.1■□□□□ 0.97
SMARCC2-202ENST00000347471 SOS1Q07889 1333 aaPredicted RBP21.1■□□□□ 0.97
SMARCC2-202ENST00000347471 UBE3BQ7Z3V4 1068 aa21.1■□□□□ 0.97
SMARCC2-202ENST00000347471 CCDC85AQ96PX6 553 aaPredicted RBP21.1■□□□□ 0.97
SMARCC2-202ENST00000347471 TMOD3Q9NYL9 352 aa21.1■□□□□ 0.97
SMARCC2-202ENST00000347471 PCDH11XQ9BZA7 1347 aa21.09■□□□□ 0.97
SMARCC2-202ENST00000347471 PCDH11YQ9BZA8 1340 aa21.09■□□□□ 0.97
SMARCC2-202ENST00000347471 RHPN1Q8TCX5 695 aa21.09■□□□□ 0.97
SMARCC2-202ENST00000347471 GRM8O00222 908 aa21.09■□□□□ 0.97
SMARCC2-202ENST00000347471 SUCLG2Q96I99 432 aa21.08■□□□□ 0.97
SMARCC2-202ENST00000347471 ANO2Q9NQ90 1003 aa21.08■□□□□ 0.97
SMARCC2-202ENST00000347471 BICC1Q9H694 974 aaKnown RBP21.08■□□□□ 0.97
SMARCC2-202ENST00000347471 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.08■□□□□ 0.976e-7■■■□□ 17.6
SMARCC2-202ENST00000347471 RGPD5Q99666 1765 aa21.08■□□□□ 0.96
SMARCC2-202ENST00000347471 LINS1Q8NG48 757 aa21.07■□□□□ 0.96
SMARCC2-202ENST00000347471 NCOA3Q9Y6Q9 1424 aa21.07■□□□□ 0.96
SMARCC2-202ENST00000347471 KIF1AQ12756 1690 aa21.07■□□□□ 0.96
SMARCC2-202ENST00000347471 PDIA6Q15084 440 aa21.06■□□□□ 0.96
SMARCC2-202ENST00000347471 A0A087WZG4 1122 aa21.06■□□□□ 0.96
SMARCC2-202ENST00000347471 G3BP1Q13283 466 aaKnown RBP eCLIP21.06■□□□□ 0.96
SMARCC2-202ENST00000347471 TTLL7Q6ZT98 887 aa21.06■□□□□ 0.96
SMARCC2-202ENST00000347471 CARD10Q9BWT7 1032 aa21.06■□□□□ 0.96
SMARCC2-202ENST00000347471 CCDC8Q9H0W5 538 aaPredicted RBP21.05■□□□□ 0.96
SMARCC2-202ENST00000347471 IFIT2P09913 472 aaKnown RBP21.05■□□□□ 0.96
SMARCC2-202ENST00000347471 ASAP1Q9ULH1 1129 aa21.05■□□□□ 0.96
SMARCC2-202ENST00000347471 CLASRPQ8N2M8 674 aaKnown RBP21.05■□□□□ 0.96
SMARCC2-202ENST00000347471 ACSBG1Q96GR2 724 aa21.05■□□□□ 0.96
SMARCC2-202ENST00000347471 NCAPD2Q15021 1401 aa21.04■□□□□ 0.96
SMARCC2-202ENST00000347471 UNC5CLQ8IV45 518 aa21.04■□□□□ 0.96
SMARCC2-202ENST00000347471 IGKV5-2P06315 115 aa21.04■□□□□ 0.96
SMARCC2-202ENST00000347471 SSH3Q8TE77 659 aa21.04■□□□□ 0.96
SMARCC2-202ENST00000347471 DEKP35659 375 aaKnown RBP21.04■□□□□ 0.96
SMARCC2-202ENST00000347471 AACSQ86V21 672 aa21.04■□□□□ 0.96
SMARCC2-202ENST00000347471 KIF1BPQ96EK5 621 aa21.04■□□□□ 0.96
SMARCC2-202ENST00000347471 TRPM3Q9HCF6 1732 aaPredicted RBP21.03■□□□□ 0.96
SMARCC2-202ENST00000347471 CAMTA1Q9Y6Y1 1673 aa21.03■□□□□ 0.96
SMARCC2-202ENST00000347471 ALDH1L1O75891 902 aa21.02■□□□□ 0.96
SMARCC2-202ENST00000347471 CPDO75976 1380 aa21.02■□□□□ 0.96
SMARCC2-202ENST00000347471 FAM177BA6PVY3 158 aa21.02■□□□□ 0.95
SMARCC2-202ENST00000347471 IBTKQ9P2D0 1353 aaPredicted RBP21.01■□□□□ 0.95
SMARCC2-202ENST00000347471 NEURL1BA8MQ27 555 aa21.01■□□□□ 0.95
SMARCC2-202ENST00000347471 EXOC5O00471 708 aa21.01■□□□□ 0.95
SMARCC2-202ENST00000347471 DNAJC10Q8IXB1 793 aa21■□□□□ 0.95
SMARCC2-202ENST00000347471 CD2BP2O95400 341 aaKnown RBP21■□□□□ 0.95
SMARCC2-202ENST00000347471 GCKRQ14397 625 aa21■□□□□ 0.95
SMARCC2-202ENST00000347471 EPHA10Q5JZY3 1008 aa21■□□□□ 0.95
SMARCC2-202ENST00000347471 ERC2O15083 957 aa20.99■□□□□ 0.95
SMARCC2-202ENST00000347471 METTL22Q9BUU2 404 aaPredicted RBP20.99■□□□□ 0.95
SMARCC2-202ENST00000347471 REC8O95072 547 aa20.99■□□□□ 0.95
SMARCC2-202ENST00000347471 GPTP24298 496 aa20.99■□□□□ 0.95
SMARCC2-202ENST00000347471 NBPF26B4DH59 902 aa20.99■□□□□ 0.95
SMARCC2-202ENST00000347471 NBPF14Q5TI25 921 aa20.99■□□□□ 0.95
SMARCC2-202ENST00000347471 NBPF10Q6P3W6 841 aaKnown RBP20.99■□□□□ 0.95
SMARCC2-202ENST00000347471 NBPF15Q8N660 670 aa20.99■□□□□ 0.95
SMARCC2-202ENST00000347471 HSP90AB4PQ58FF6 505 aa20.98■□□□□ 0.95
SMARCC2-202ENST00000347471 CWC27Q6UX04 472 aaKnown RBP20.98■□□□□ 0.95
SMARCC2-202ENST00000347471 HDAC5Q9UQL6 1122 aa20.98■□□□□ 0.95
SMARCC2-202ENST00000347471 COL5A2P05997 1499 aaPredicted RBP20.97■□□□□ 0.95
SMARCC2-202ENST00000347471 RAB11FIP3O75154 756 aa20.97■□□□□ 0.95
SMARCC2-202ENST00000347471 PIGBQ92521 554 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms