RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 EIF4A1P60842 406 aaKnown RBP29.4■■■□□ 2.3
PTPA-202ENST00000347048 PPP1R42Q7Z4L9 355 aa29.4■■■□□ 2.3
PTPA-202ENST00000347048 GPT2Q8TD30 523 aa29.4■■■□□ 2.3
PTPA-202ENST00000347048 PHAXQ9H814 394 aaKnown RBP29.4■■■□□ 2.3
PTPA-202ENST00000347048 PHF8Q9UPP1 1060 aa29.4■■■□□ 2.3
PTPA-202ENST00000347048 HSP90AB4PQ58FF6 505 aa29.39■■■□□ 2.3
PTPA-202ENST00000347048 KIF1BPQ96EK5 621 aa29.39■■■□□ 2.3
PTPA-202ENST00000347048 LMO7Q8WWI1 1683 aa29.39■■■□□ 2.3
PTPA-202ENST00000347048 SURF6O75683 361 aaKnown RBP29.38■■■□□ 2.29
PTPA-202ENST00000347048 HSPA4P34932 840 aa29.38■■■□□ 2.29
PTPA-202ENST00000347048 UNC5CLQ8IV45 518 aa29.38■■■□□ 2.29
PTPA-202ENST00000347048 RHPN1Q8TCX5 695 aa29.38■■■□□ 2.29
PTPA-202ENST00000347048 HS1BP3Q53T59 392 aa29.37■■■□□ 2.29
PTPA-202ENST00000347048 NAP1L5Q96NT1 182 aaPredicted RBP29.37■■■□□ 2.29
PTPA-202ENST00000347048 IL1RAPL2Q9NP60 686 aa29.37■■■□□ 2.29
PTPA-202ENST00000347048 USHBP1Q8N6Y0 703 aa29.35■■■□□ 2.29
PTPA-202ENST00000347048 PI4K2BQ8TCG2 481 aa29.35■■■□□ 2.29
PTPA-202ENST00000347048 DNAAF4Q8WXU2 420 aa29.35■■■□□ 2.29
PTPA-202ENST00000347048 BEND3Q5T5X7 828 aa29.35■■■□□ 2.29
PTPA-202ENST00000347048 KCNH5Q8NCM2 988 aa29.35■■■□□ 2.29
PTPA-202ENST00000347048 ZSCAN30Q86W11 494 aa29.34■■■□□ 2.29
PTPA-202ENST00000347048 USP42Q9H9J4 1324 aaKnown RBP29.34■■■□□ 2.29
PTPA-202ENST00000347048 CRYBG1Q9Y4K1 1723 aa29.34■■■□□ 2.29
PTPA-202ENST00000347048 SRGAP3O43295 1099 aa29.33■■■□□ 2.29
PTPA-202ENST00000347048 LRSAM1Q6UWE0 723 aa29.33■■■□□ 2.29
PTPA-202ENST00000347048 C14orf37Q86TY3 774 aa29.33■■■□□ 2.29
PTPA-202ENST00000347048 NUTM1Q86Y26 1132 aa29.33■■■□□ 2.29
PTPA-202ENST00000347048 CNTROBQ8N137 903 aa29.33■■■□□ 2.29
PTPA-202ENST00000347048 NCAPD2Q15021 1401 aa29.33■■■□□ 2.29
PTPA-202ENST00000347048 CHD2O14647 1828 aaKnown RBP29.33■■■□□ 2.29
PTPA-202ENST00000347048 AKAP4Q5JQC9 854 aa29.33■■■□□ 2.29
PTPA-202ENST00000347048 RAD50Q92878 1312 aa29.33■■■□□ 2.29
PTPA-202ENST00000347048 OVOS2A0A0G2JMS6 1433 aa29.33■■■□□ 2.29
PTPA-202ENST00000347048 PLEKHG5O94827 1062 aa29.32■■■□□ 2.28
PTPA-202ENST00000347048 SGSM2O43147 1006 aa29.32■■■□□ 2.28
PTPA-202ENST00000347048 EIF2S2P20042 333 aaKnown RBP29.32■■■□□ 2.28
PTPA-202ENST00000347048 NBPF6Q5VWK0 638 aa29.32■■■□□ 2.28
PTPA-202ENST00000347048 NBPF4Q96M43 638 aa29.32■■■□□ 2.28
PTPA-202ENST00000347048 RBSNQ9H1K0 784 aa29.32■■■□□ 2.28
PTPA-202ENST00000347048 CHPF2Q9P2E5 772 aa29.32■■■□□ 2.28
PTPA-202ENST00000347048 PRIM1P49642 420 aaKnown RBP29.31■■■□□ 2.28
PTPA-202ENST00000347048 TTC41PQ6P2S7 1318 aa29.31■■■□□ 2.28
PTPA-202ENST00000347048 TMEM63CQ9P1W3 806 aa29.3■■■□□ 2.28
PTPA-202ENST00000347048 MTX1Q13505 466 aa29.3■■■□□ 2.28
PTPA-202ENST00000347048 PDLIM2Q96JY6 352 aa29.3■■■□□ 2.28
PTPA-202ENST00000347048 HDAC5Q9UQL6 1122 aa29.3■■■□□ 2.28
PTPA-202ENST00000347048 WDR33Q9C0J8 1336 aaKnown RBP29.29■■■□□ 2.28
PTPA-202ENST00000347048 NBPF7P0C2Y1 421 aaPredicted RBP29.29■■■□□ 2.28
PTPA-202ENST00000347048 TEFQ10587 303 aa29.29■■■□□ 2.28
PTPA-202ENST00000347048 PLEKHO1Q53GL0 409 aaPredicted RBP29.29■■■□□ 2.28
PTPA-202ENST00000347048 RBM27Q9P2N5 1060 aaKnown RBP29.29■■■□□ 2.28
PTPA-202ENST00000347048 PI4KAP2A4QPH2 592 aa29.28■■■□□ 2.28
PTPA-202ENST00000347048 AMOTQ4VCS5 1084 aa29.28■■■□□ 2.28
PTPA-202ENST00000347048 PI4KAP1Q8N8J0 262 aa29.28■■■□□ 2.28
PTPA-202ENST00000347048 SYAP1Q96A49 352 aaPredicted RBP29.28■■■□□ 2.28
PTPA-202ENST00000347048 LGR6Q9HBX8 967 aa29.28■■■□□ 2.28
PTPA-202ENST00000347048 UPF3BQ9BZI7 483 aaKnown RBP29.28■■■□□ 2.28
PTPA-202ENST00000347048 NPHP4O75161 1426 aaPredicted RBP29.27■■■□□ 2.28
PTPA-202ENST00000347048 BTBD11A6QL63 1104 aa29.26■■■□□ 2.28
PTPA-202ENST00000347048 ALDH1L1O75891 902 aa29.26■■■□□ 2.28
PTPA-202ENST00000347048 IL25Q9H293 177 aa29.26■■■□□ 2.28
PTPA-202ENST00000347048 DBF4Q9UBU7 674 aaPredicted RBP29.26■■■□□ 2.28
PTPA-202ENST00000347048 ADCY9O60503 1353 aa29.26■■■□□ 2.27
PTPA-202ENST00000347048 GLRX3O76003 335 aaKnown RBP29.26■■■□□ 2.27
PTPA-202ENST00000347048 ZNF530Q6P9A1 599 aaPredicted RBP29.25■■■□□ 2.27
PTPA-202ENST00000347048 LSG1Q9H089 658 aaKnown RBP29.25■■■□□ 2.27
PTPA-202ENST00000347048 KIAA1211Q6ZU35 1233 aa29.24■■■□□ 2.27
PTPA-202ENST00000347048 MSNP26038 577 aaKnown RBP29.24■■■□□ 2.27
PTPA-202ENST00000347048 FOXD4L5Q5VV16 416 aaPredicted RBP29.24■■■□□ 2.27
PTPA-202ENST00000347048 NOL8Q76FK4 1167 aaKnown RBP29.24■■■□□ 2.27
PTPA-202ENST00000347048 FOXD4L4Q8WXT5 416 aaPredicted RBP29.24■■■□□ 2.27
PTPA-202ENST00000347048 SNX14Q9Y5W7 946 aa29.24■■■□□ 2.27
PTPA-202ENST00000347048 STRCQ7RTU9 1775 aa29.23■■■□□ 2.27
PTPA-202ENST00000347048 SYCE3A1L190 88 aa29.22■■■□□ 2.27
PTPA-202ENST00000347048 PSME1Q06323 249 aa29.22■■■□□ 2.27
PTPA-202ENST00000347048 ERC1Q8IUD2 1116 aa29.22■■■□□ 2.27
PTPA-202ENST00000347048 RUFY2Q8WXA3 655 aa29.22■■■□□ 2.27
PTPA-202ENST00000347048 RGPD2P0DJD1 1756 aa29.22■■■□□ 2.27
PTPA-202ENST00000347048 TTC14Q96N46 770 aa29.22■■■□□ 2.27
PTPA-202ENST00000347048 NSFL1CQ9UNZ2 370 aaKnown RBP29.22■■■□□ 2.27
PTPA-202ENST00000347048 PHF14O94880 888 aa29.21■■■□□ 2.27
PTPA-202ENST00000347048 KCNQ3O43525 872 aa29.21■■■□□ 2.27
PTPA-202ENST00000347048 AEBP2Q6ZN18 517 aaPredicted RBP29.21■■■□□ 2.27
PTPA-202ENST00000347048 CLASRPQ8N2M8 674 aaKnown RBP29.21■■■□□ 2.27
PTPA-202ENST00000347048 CHAMP1Q96JM3 812 aa29.21■■■□□ 2.27
PTPA-202ENST00000347048 RNMTO43148 476 aaKnown RBP29.2■■■□□ 2.26
PTPA-202ENST00000347048 MAP4K4O95819 1239 aaPredicted RBP29.2■■■□□ 2.26
PTPA-202ENST00000347048 OS9Q13438 667 aaPredicted RBP29.2■■■□□ 2.26
PTPA-202ENST00000347048 TMEM87AQ8NBN3 555 aa29.2■■■□□ 2.26
PTPA-202ENST00000347048 GPATCH3Q96I76 525 aa29.2■■■□□ 2.26
PTPA-202ENST00000347048 HEG1Q9ULI3 1381 aa29.19■■■□□ 2.26
PTPA-202ENST00000347048 SLIT3O75094 1523 aa29.19■■■□□ 2.26
PTPA-202ENST00000347048 C1orf141Q5JVX7 400 aa29.19■■■□□ 2.26
PTPA-202ENST00000347048 KSR2Q6VAB6 950 aa29.18■■■□□ 2.26
PTPA-202ENST00000347048 NOL7Q9UMY1 257 aaKnown RBP29.18■■■□□ 2.26
PTPA-202ENST00000347048 LIMCH1Q9UPQ0 1083 aa29.18■■■□□ 2.26
PTPA-202ENST00000347048 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.18■■■□□ 2.26
PTPA-202ENST00000347048 CAMTA1Q9Y6Y1 1673 aa29.18■■■□□ 2.26
PTPA-202ENST00000347048 RPAP1Q9BWH6 1393 aaPredicted RBP29.18■■■□□ 2.26
PTPA-202ENST00000347048 DIAPH3Q9NSV4 1193 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms