RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 RPAP1Q9BWH6 1393 aaPredicted RBP21.44■■□□□ 1.02
VHL-202ENST00000345392 CRB1P82279 1406 aa21.43■■□□□ 1.02
VHL-202ENST00000345392 OVOS2A0A0J9YW53 1432 aa21.43■■□□□ 1.02
VHL-202ENST00000345392 OVOS2Q6IE36 1432 aa21.43■■□□□ 1.02
VHL-202ENST00000345392 FKBP5Q13451 457 aaPredicted RBP21.43■■□□□ 1.02
VHL-202ENST00000345392 NUTM1Q86Y26 1132 aa21.43■■□□□ 1.02
VHL-202ENST00000345392 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.43■■□□□ 1.02
VHL-202ENST00000345392 ATP8B2P98198 1209 aa21.42■■□□□ 1.02
VHL-202ENST00000345392 NRKQ7Z2Y5 1582 aa21.42■■□□□ 1.02
VHL-202ENST00000345392 FIBPO43427 364 aa21.42■■□□□ 1.02
VHL-202ENST00000345392 RTF1Q92541 710 aaKnown RBP21.42■■□□□ 1.02
VHL-202ENST00000345392 LRRFIP2Q9Y608 721 aaKnown RBP21.42■■□□□ 1.02
VHL-202ENST00000345392 TECPR2O15040 1411 aa21.42■■□□□ 1.02
VHL-202ENST00000345392 HSPA4P34932 840 aa21.42■■□□□ 1.02
VHL-202ENST00000345392 PRIMPOLQ96LW4 560 aa21.42■■□□□ 1.02
VHL-202ENST00000345392 USP6P35125 1406 aa21.41■■□□□ 1.02
VHL-202ENST00000345392 GIMAP6Q6P9H5 292 aa21.41■■□□□ 1.02
VHL-202ENST00000345392 TMEM2Q9UHN6 1383 aa21.41■■□□□ 1.02
VHL-202ENST00000345392 STAP2Q9UGK3 403 aa21.41■■□□□ 1.02
VHL-202ENST00000345392 ZHX1Q9UKY1 873 aaPredicted RBP21.41■■□□□ 1.02
VHL-202ENST00000345392 ZSCAN22P10073 491 aaPredicted RBP21.4■■□□□ 1.02
VHL-202ENST00000345392 STK31Q9BXU1 1019 aa21.4■■□□□ 1.02
VHL-202ENST00000345392 ADAMTS13Q76LX8 1427 aa21.4■■□□□ 1.02
VHL-202ENST00000345392 SYT1P21579 422 aa21.4■■□□□ 1.02
VHL-202ENST00000345392 FLIIQ13045 1269 aa21.4■■□□□ 1.02
VHL-202ENST00000345392 KDM4AO75164 1064 aa21.39■■□□□ 1.01
VHL-202ENST00000345392 GNAI3P08754 354 aa21.39■■□□□ 1.01
VHL-202ENST00000345392 TMEM87AQ8NBN3 555 aa21.39■■□□□ 1.01
VHL-202ENST00000345392 SSH2Q76I76 1423 aa21.39■■□□□ 1.01
VHL-202ENST00000345392 CPA1P15085 419 aa21.39■■□□□ 1.01
VHL-202ENST00000345392 HDGFP51858 240 aaKnown RBP21.39■■□□□ 1.01
VHL-202ENST00000345392 HMGN5P82970 282 aaKnown RBP21.39■■□□□ 1.01
VHL-202ENST00000345392 LTV1Q96GA3 475 aaPredicted RBP21.39■■□□□ 1.01
VHL-202ENST00000345392 EYA1Q99502 592 aa21.39■■□□□ 1.01
VHL-202ENST00000345392 AP5Z1O43299 807 aa21.38■■□□□ 1.01
VHL-202ENST00000345392 STX6O43752 255 aa21.38■■□□□ 1.01
VHL-202ENST00000345392 AMPHP49418 695 aa21.38■■□□□ 1.01
VHL-202ENST00000345392 AK2P54819 239 aa21.38■■□□□ 1.01
VHL-202ENST00000345392 UBE2HP62256 183 aa21.38■■□□□ 1.01
VHL-202ENST00000345392 CBX1P83916 185 aa21.38■■□□□ 1.01
VHL-202ENST00000345392 RASEFQ8IZ41 740 aa21.38■■□□□ 1.01
VHL-202ENST00000345392 SNX14Q9Y5W7 946 aa21.38■■□□□ 1.01
VHL-202ENST00000345392 PLEKHG5O94827 1062 aa21.37■■□□□ 1.01
VHL-202ENST00000345392 IL17RAQ96F46 866 aa21.37■■□□□ 1.01
VHL-202ENST00000345392 PLEKHG3A1L390 1219 aa21.37■■□□□ 1.01
VHL-202ENST00000345392 NGDNQ8NEJ9 315 aaKnown RBP21.37■■□□□ 1.01
VHL-202ENST00000345392 SIRT1Q96EB6 747 aa21.37■■□□□ 1.01
VHL-202ENST00000345392 KIF3AQ9Y496 699 aa21.37■■□□□ 1.01
VHL-202ENST00000345392 RUFY3Q7L099 469 aa21.36■■□□□ 1.01
VHL-202ENST00000345392 SPC24Q8NBT2 197 aa21.36■■□□□ 1.01
VHL-202ENST00000345392 GTF2F1P35269 517 aaKnown RBP eCLIP21.36■■□□□ 1.01
VHL-202ENST00000345392 SPTLC3Q9NUV7 552 aa21.36■■□□□ 1.01
VHL-202ENST00000345392 TUBGCP6Q96RT7 1819 aa21.35■■□□□ 1.01
VHL-202ENST00000345392 CEP170BQ9Y4F5 1589 aaPredicted RBP21.35■■□□□ 1.01
VHL-202ENST00000345392 PTPRUQ92729 1446 aa21.35■■□□□ 1.01
VHL-202ENST00000345392 LETM1O95202 739 aaPredicted RBP21.35■■□□□ 1.01
VHL-202ENST00000345392 F13A1P00488 732 aa21.35■■□□□ 1.01
VHL-202ENST00000345392 PPP4R3BQ5MIZ7 849 aa21.35■■□□□ 1.01
VHL-202ENST00000345392 TTC14Q96N46 770 aa21.35■■□□□ 1.01
VHL-202ENST00000345392 PYCARDQ9ULZ3 195 aa21.35■■□□□ 1.01
VHL-202ENST00000345392 SMC3Q9UQE7 1217 aa21.35■■□□□ 1.01
VHL-202ENST00000345392 LARGE1O95461 756 aa21.34■■□□□ 1.01
VHL-202ENST00000345392 ZSCAN20P17040 1043 aaPredicted RBP21.34■■□□□ 1.01
VHL-202ENST00000345392 DNM1Q05193 864 aaKnown RBP21.34■■□□□ 1.01
VHL-202ENST00000345392 USP44Q9H0E7 712 aa21.34■■□□□ 1.01
VHL-202ENST00000345392 KCNF1Q9H3M0 494 aa21.34■■□□□ 1.01
VHL-202ENST00000345392 BCL2L12Q9HB09 334 aa21.34■■□□□ 1.01
VHL-202ENST00000345392 SPG7Q9UQ90 795 aa21.34■■□□□ 1.01
VHL-202ENST00000345392 ATP2B3Q16720 1220 aa21.33■■□□□ 1.01
VHL-202ENST00000345392 FUCA2Q9BTY2 467 aa21.33■■□□□ 1.01
VHL-202ENST00000345392 LIMCH1Q9UPQ0 1083 aa21.33■■□□□ 1.01
VHL-202ENST00000345392 AMOTL2Q9Y2J4 779 aa21.33■■□□□ 1.01
VHL-202ENST00000345392 RAD50Q92878 1312 aa21.33■■□□□ 1.01
VHL-202ENST00000345392 SGSM2O43147 1006 aa21.33■■□□□ 1.01
VHL-202ENST00000345392 SURF6O75683 361 aaKnown RBP21.33■■□□□ 1.01
VHL-202ENST00000345392 USHBP1Q8N6Y0 703 aa21.33■■□□□ 1.01
VHL-202ENST00000345392 CWC27Q6UX04 472 aaKnown RBP21.32■■□□□ 1
VHL-202ENST00000345392 HSPA2P54652 639 aa21.32■■□□□ 1
VHL-202ENST00000345392 CCDC83Q8IWF9 413 aa21.32■■□□□ 1
VHL-202ENST00000345392 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.32■■□□□ 1
VHL-202ENST00000345392 RGPD1P0DJD0 1748 aa21.32■■□□□ 1
VHL-202ENST00000345392 USP31Q70CQ4 1352 aa21.32■■□□□ 1
VHL-202ENST00000345392 UBTFL1P0CB47 393 aaPredicted RBP21.32■■□□□ 1
VHL-202ENST00000345392 CCDC30Q5VVM6 783 aa21.32■■□□□ 1
VHL-202ENST00000345392 LSG1Q9H089 658 aaKnown RBP21.32■■□□□ 1
VHL-202ENST00000345392 CASTP20810 708 aaKnown RBP21.31■■□□□ 1
VHL-202ENST00000345392 KIAA1524Q8TCG1 905 aa21.31■■□□□ 1
VHL-202ENST00000345392 PI4K2BQ8TCG2 481 aa21.31■■□□□ 1
VHL-202ENST00000345392 CHMP3Q9Y3E7 222 aa21.31■■□□□ 1
VHL-202ENST00000345392 UBR1Q8IWV7 1749 aa21.31■■□□□ 1
VHL-202ENST00000345392 NLRP6P59044 892 aa21.31■■□□□ 1
VHL-202ENST00000345392 DMTNQ08495 405 aa21.31■■□□□ 1
VHL-202ENST00000345392 SOS1Q07889 1333 aaPredicted RBP21.3■■□□□ 1
VHL-202ENST00000345392 ARHGEF10O15013 1369 aa21.3■■□□□ 1
VHL-202ENST00000345392 GJB2P29033 226 aa21.3■■□□□ 1
VHL-202ENST00000345392 PPP1R42Q7Z4L9 355 aa21.3■■□□□ 1
VHL-202ENST00000345392 DDX54Q8TDD1 881 aaKnown RBP21.3■■□□□ 1
VHL-202ENST00000345392 FLT4P35916 1363 aa21.3■■□□□ 1
VHL-202ENST00000345392 SPDYE4A6NLX3 237 aa21.3■■□□□ 1
VHL-202ENST00000345392 RIOK3O14730 519 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms