RNA–Protein interactions for RNA: ENST00000344780.4

SNX21-202, Transcript of sorting nexin family member 21, humanhuman

TSL 2

Gene SNX21, Length 3,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-202ENST00000344780 NSFL1CQ9UNZ2 370 aaKnown RBP16.18■□□□□ 0.18
SNX21-202ENST00000344780 ZDHHC9Q9Y397 364 aa16.18■□□□□ 0.18
SNX21-202ENST00000344780 TTC21AQ8NDW8 1320 aa16.18■□□□□ 0.18
SNX21-202ENST00000344780 KIF24Q5T7B8 1368 aa16.18■□□□□ 0.18
SNX21-202ENST00000344780 PRAMEF22A3QJZ6 481 aa16.18■□□□□ 0.18
SNX21-202ENST00000344780 IGSF1Q8N6C5 1336 aa16.18■□□□□ 0.18
SNX21-202ENST00000344780 ZC3H6P61129 1189 aaKnown RBP16.17■□□□□ 0.18
SNX21-202ENST00000344780 RBSNQ9H1K0 784 aa16.17■□□□□ 0.18
SNX21-202ENST00000344780 CHPF2Q9P2E5 772 aa16.17■□□□□ 0.18
SNX21-202ENST00000344780 GPT2Q8TD30 523 aa16.17■□□□□ 0.18
SNX21-202ENST00000344780 DDX17Q92841 729 aaKnown RBP16.17■□□□□ 0.18
SNX21-202ENST00000344780 TEFQ10587 303 aa16.17■□□□□ 0.18
SNX21-202ENST00000344780 ZNF530Q6P9A1 599 aaPredicted RBP16.17■□□□□ 0.18
SNX21-202ENST00000344780 DDX54Q8TDD1 881 aaKnown RBP16.17■□□□□ 0.18
SNX21-202ENST00000344780 PEAK1Q9H792 1746 aa16.16■□□□□ 0.18
SNX21-202ENST00000344780 PI4KAP2A4QPH2 592 aa16.16■□□□□ 0.18
SNX21-202ENST00000344780 NBPF7P0C2Y1 421 aaPredicted RBP16.16■□□□□ 0.18
SNX21-202ENST00000344780 CCDC173Q0VFZ6 552 aa16.16■□□□□ 0.18
SNX21-202ENST00000344780 ITSN1Q15811 1721 aa16.16■□□□□ 0.18
SNX21-202ENST00000344780 PI4KAP1Q8N8J0 262 aa16.16■□□□□ 0.18
SNX21-202ENST00000344780 PIP4K2AP48426 406 aaPredicted RBP16.16■□□□□ 0.18
SNX21-202ENST00000344780 SRGAP3O43295 1099 aa16.15■□□□□ 0.18
SNX21-202ENST00000344780 CHMLP26374 656 aa16.15■□□□□ 0.18
SNX21-202ENST00000344780 GTF2E1P29083 439 aaPredicted RBP16.15■□□□□ 0.18
SNX21-202ENST00000344780 ATP8B2P98198 1209 aa16.15■□□□□ 0.18
SNX21-202ENST00000344780 USP44Q9H0E7 712 aa16.15■□□□□ 0.18
SNX21-202ENST00000344780 PPP1R42Q7Z4L9 355 aa16.15■□□□□ 0.18
SNX21-202ENST00000344780 C3P01024 1663 aa16.15■□□□□ 0.18
SNX21-202ENST00000344780 RGPD8O14715 1765 aaPredicted RBP16.15■□□□□ 0.18
SNX21-202ENST00000344780 USP31Q70CQ4 1352 aa16.14■□□□□ 0.17
SNX21-202ENST00000344780 TMEM63CQ9P1W3 806 aa16.14■□□□□ 0.17
SNX21-202ENST00000344780 IL25Q9H293 177 aa16.14■□□□□ 0.17
SNX21-202ENST00000344780 ARHGEF10O15013 1369 aa16.14■□□□□ 0.17
SNX21-202ENST00000344780 BTBD11A6QL63 1104 aa16.13■□□□□ 0.17
SNX21-202ENST00000344780 CWC27Q6UX04 472 aaKnown RBP16.13■□□□□ 0.17
SNX21-202ENST00000344780 CHMP4AQ9BY43 222 aa16.13■□□□□ 0.17
SNX21-202ENST00000344780 MON2Q7Z3U7 1717 aa16.13■□□□□ 0.17
SNX21-202ENST00000344780 UBR1Q8IWV7 1749 aa16.13■□□□□ 0.17
SNX21-202ENST00000344780 CYP2E1P05181 493 aaPredicted RBP16.12■□□□□ 0.17
SNX21-202ENST00000344780 SPG7Q9UQ90 795 aa16.12■□□□□ 0.17
SNX21-202ENST00000344780 PTMAP06454 111 aaKnown RBP16.12■□□□□ 0.17
SNX21-202ENST00000344780 PLCB2Q00722 1185 aa16.12■□□□□ 0.17
SNX21-202ENST00000344780 DNTTIP2Q5QJE6 756 aaKnown RBP16.12■□□□□ 0.17
SNX21-202ENST00000344780 CCDC9Q9Y3X0 531 aaKnown RBP16.12■□□□□ 0.17
SNX21-202ENST00000344780 SPDYE4A6NLX3 237 aa16.12■□□□□ 0.17
SNX21-202ENST00000344780 CPA1P15085 419 aa16.12■□□□□ 0.17
SNX21-202ENST00000344780 SLC39A6Q13433 755 aa16.12■□□□□ 0.17
SNX21-202ENST00000344780 SRCIN1Q9C0H9 1055 aa16.12■□□□□ 0.17
SNX21-202ENST00000344780 PA2G4Q9UQ80 394 aaKnown RBP16.12■□□□□ 0.17
SNX21-202ENST00000344780 PROSER3Q2NL68 480 aa16.11■□□□□ 0.17
SNX21-202ENST00000344780 ANKLE2Q86XL3 938 aa16.11■□□□□ 0.17
SNX21-202ENST00000344780 MAP3K5Q99683 1374 aa16.11■□□□□ 0.17
SNX21-202ENST00000344780 REREQ9P2R6 1566 aa16.11■□□□□ 0.17
SNX21-202ENST00000344780 OSBPL3Q9H4L5 887 aa16.11■□□□□ 0.17
SNX21-202ENST00000344780 KIF13AQ9H1H9 1805 aa16.11■□□□□ 0.17
SNX21-202ENST00000344780 CWF19L2Q2TBE0 894 aaKnown RBP16.1■□□□□ 0.17
SNX21-202ENST00000344780 ZSCAN30Q86W11 494 aa16.1■□□□□ 0.17
SNX21-202ENST00000344780 CLEC17AQ6ZS10 378 aa16.1■□□□□ 0.17
SNX21-202ENST00000344780 CABLES1Q8TDN4 633 aa16.09■□□□□ 0.17
SNX21-202ENST00000344780 SSH2Q76I76 1423 aa16.09■□□□□ 0.17
SNX21-202ENST00000344780 MYL6BP14649 208 aa16.09■□□□□ 0.17
SNX21-202ENST00000344780 ZNF445P59923 1031 aa16.09■□□□□ 0.17
SNX21-202ENST00000344780 SIL1Q9H173 461 aa16.09■□□□□ 0.17
SNX21-202ENST00000344780 C9orf78Q9NZ63 289 aaPredicted RBP16.09■□□□□ 0.17
SNX21-202ENST00000344780 AKAP12Q02952 1782 aa16.08■□□□□ 0.17
SNX21-202ENST00000344780 C1orf141Q5JVX7 400 aa16.08■□□□□ 0.17
SNX21-202ENST00000344780 RHPN1Q8TCX5 695 aa16.08■□□□□ 0.17
SNX21-202ENST00000344780 GADD45BO75293 160 aaPredicted RBP16.08■□□□□ 0.16
SNX21-202ENST00000344780 SOS1Q07889 1333 aaPredicted RBP16.08■□□□□ 0.16
SNX21-202ENST00000344780 AXIN2Q9Y2T1 843 aa16.08■□□□□ 0.16
SNX21-202ENST00000344780 EIF4A1P60842 406 aaKnown RBP16.07■□□□□ 0.16
SNX21-202ENST00000344780 IP6K1Q92551 441 aa16.07■□□□□ 0.16
SNX21-202ENST00000344780 IBTKQ9P2D0 1353 aaPredicted RBP16.07■□□□□ 0.16
SNX21-202ENST00000344780 GCP02774 474 aa16.07■□□□□ 0.16
SNX21-202ENST00000344780 KCNJ4P48050 445 aa16.07■□□□□ 0.16
SNX21-202ENST00000344780 KDRP35968 1356 aa16.06■□□□□ 0.16
SNX21-202ENST00000344780 MCM2P49736 904 aa16.06■□□□□ 0.16
SNX21-202ENST00000344780 DNAAF4Q8WXU2 420 aa16.06■□□□□ 0.16
SNX21-202ENST00000344780 PPP1R9BQ96SB3 815 aa16.06■□□□□ 0.16
SNX21-202ENST00000344780 NLRP2Q9NX02 1062 aa16.06■□□□□ 0.16
SNX21-202ENST00000344780 DIP2AQ14689 1571 aa16.06■□□□□ 0.16
SNX21-202ENST00000344780 KLHDC4Q8TBB5 520 aa16.06■□□□□ 0.16
SNX21-202ENST00000344780 MAP3K2Q9Y2U5 619 aa16.06■□□□□ 0.16
SNX21-202ENST00000344780 CHMP3Q9Y3E7 222 aa16.06■□□□□ 0.16
SNX21-202ENST00000344780 LRSAM1Q6UWE0 723 aa16.05■□□□□ 0.16
SNX21-202ENST00000344780 ANKRD24Q8TF21 1146 aa16.05■□□□□ 0.16
SNX21-202ENST00000344780 CSB-PGBD3P0DP91 1061 aa16.05■□□□□ 0.16
SNX21-202ENST00000344780 DIAPH3Q9NSV4 1193 aa16.05■□□□□ 0.16
SNX21-202ENST00000344780 FIBPO43427 364 aa16.05■□□□□ 0.16
SNX21-202ENST00000344780 BRD1O95696 1058 aa16.05■□□□□ 0.16
SNX21-202ENST00000344780 CHRNA2Q15822 529 aa16.05■□□□□ 0.16
SNX21-202ENST00000344780 CERS3Q8IU89 383 aa16.05■□□□□ 0.16
SNX21-202ENST00000344780 USP48Q86UV5 1035 aa16.04■□□□□ 0.16
SNX21-202ENST00000344780 PROSER2Q86WR7 435 aaPredicted RBP16.04■□□□□ 0.16
SNX21-202ENST00000344780 CGNQ9P2M7 1197 aaKnown RBP16.04■□□□□ 0.16
SNX21-202ENST00000344780 RASEFQ8IZ41 740 aa16.04■□□□□ 0.16
SNX21-202ENST00000344780 CNTROBQ8N137 903 aa16.04■□□□□ 0.16
SNX21-202ENST00000344780 MBD3O95983 291 aa16.03■□□□□ 0.16
SNX21-202ENST00000344780 CASTP20810 708 aaKnown RBP16.03■□□□□ 0.16
SNX21-202ENST00000344780 PLEKHO1Q53GL0 409 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms