RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 FYB1O15117 783 aa20.99■□□□□ 0.95
SMC4-201ENST00000344722 SDSP20132 328 aa20.99■□□□□ 0.95
SMC4-201ENST00000344722 IPO4Q8TEX9 1081 aaKnown RBP20.99■□□□□ 0.95
SMC4-201ENST00000344722 C8orf76Q96K31 380 aa20.99■□□□□ 0.95
SMC4-201ENST00000344722 PRM3Q9NNZ6 103 aa20.99■□□□□ 0.95
SMC4-201ENST00000344722 NSD2O96028 1365 aa20.98■□□□□ 0.95
SMC4-201ENST00000344722 RAD21O60216 631 aa20.98■□□□□ 0.95
SMC4-201ENST00000344722 AFAP1Q8N556 730 aa20.98■□□□□ 0.95
SMC4-201ENST00000344722 RBSNQ9H1K0 784 aa20.98■□□□□ 0.95
SMC4-201ENST00000344722 ZSCAN16Q9H4T2 348 aaPredicted RBP20.98■□□□□ 0.95
SMC4-201ENST00000344722 GABPB1Q06547 395 aaPredicted RBP20.98■□□□□ 0.95
SMC4-201ENST00000344722 CCDC12Q8WUD4 166 aaPredicted RBP20.97■□□□□ 0.95
SMC4-201ENST00000344722 CCDC43Q96MW1 224 aaKnown RBP20.97■□□□□ 0.95
SMC4-201ENST00000344722 ZNF445P59923 1031 aa20.97■□□□□ 0.95
SMC4-201ENST00000344722 SYCP1Q15431 976 aa20.97■□□□□ 0.95
SMC4-201ENST00000344722 ZFYVE27Q5T4F4 411 aa20.97■□□□□ 0.95
SMC4-201ENST00000344722 RBM42Q9BTD8 480 aaKnown RBP20.97■□□□□ 0.95
SMC4-201ENST00000344722 SCAF11Q99590 1463 aaKnown RBP20.97■□□□□ 0.95
SMC4-201ENST00000344722 CCDC57Q2TAC2 916 aa20.97■□□□□ 0.95
SMC4-201ENST00000344722 TMX1Q9H3N1 280 aa20.96■□□□□ 0.95
SMC4-201ENST00000344722 YEATS4O95619 227 aa20.96■□□□□ 0.95
SMC4-201ENST00000344722 STK11IPQ8N1F8 1099 aa20.96■□□□□ 0.95
SMC4-201ENST00000344722 F13A1P00488 732 aa20.96■□□□□ 0.95
SMC4-201ENST00000344722 SEPT7Q16181 437 aaKnown RBP20.96■□□□□ 0.95
SMC4-201ENST00000344722 DYDC1Q8WWB3 177 aa20.96■□□□□ 0.95
SMC4-201ENST00000344722 DNAI1Q9UI46 699 aa20.95■□□□□ 0.94
SMC4-201ENST00000344722 PAFAH1B1P43034 410 aa20.95■□□□□ 0.94
SMC4-201ENST00000344722 NEFHP12036 1026 aa20.95■□□□□ 0.94
SMC4-201ENST00000344722 CNNM3Q8NE01 707 aa20.95■□□□□ 0.94
SMC4-201ENST00000344722 SLC26A8Q96RN1 970 aa20.95■□□□□ 0.94
SMC4-201ENST00000344722 LARP6Q9BRS8 491 aaKnown RBP20.95■□□□□ 0.94
SMC4-201ENST00000344722 PIBF1Q8WXW3 757 aa20.94■□□□□ 0.94
SMC4-201ENST00000344722 DDX54Q8TDD1 881 aaKnown RBP20.94■□□□□ 0.94
SMC4-201ENST00000344722 RSPH14Q9UHP6 348 aa20.94■□□□□ 0.94
SMC4-201ENST00000344722 KRT18P05783 430 aaKnown RBP20.94■□□□□ 0.94
SMC4-201ENST00000344722 EVI5LQ96CN4 794 aa20.94■□□□□ 0.94
SMC4-201ENST00000344722 IGSF3O75054 1194 aa20.94■□□□□ 0.94
SMC4-201ENST00000344722 NUP133Q8WUM0 1156 aa20.94■□□□□ 0.94
SMC4-201ENST00000344722 INTS4Q96HW7 963 aaKnown RBP20.94■□□□□ 0.94
SMC4-201ENST00000344722 NUP88Q99567 741 aaPredicted RBP20.94■□□□□ 0.94
SMC4-201ENST00000344722 RASSF4Q9H2L5 321 aa20.94■□□□□ 0.94
SMC4-201ENST00000344722 RTEL1-TNFRSF6BF6WH68 1400 aa20.94■□□□□ 0.94
SMC4-201ENST00000344722 PTGS1P23219 599 aa20.93■□□□□ 0.94
SMC4-201ENST00000344722 DHX37Q8IY37 1157 aaKnown RBP20.93■□□□□ 0.94
SMC4-201ENST00000344722 USO1O60763 962 aaKnown RBP20.93■□□□□ 0.94
SMC4-201ENST00000344722 SPG7Q9UQ90 795 aa20.93■□□□□ 0.94
SMC4-201ENST00000344722 ASXL1Q8IXJ9 1541 aa20.93■□□□□ 0.94
SMC4-201ENST00000344722 MAP2K1Q02750 393 aaPredicted RBP20.93■□□□□ 0.94
SMC4-201ENST00000344722 TYRO3Q06418 890 aa20.93■□□□□ 0.94
SMC4-201ENST00000344722 TTC31Q49AM3 519 aaPredicted RBP20.92■□□□□ 0.94
SMC4-201ENST00000344722 ESYT1Q9BSJ8 1104 aa20.92■□□□□ 0.94
SMC4-201ENST00000344722 IBSPP21815 317 aaPredicted RBP20.92■□□□□ 0.94
SMC4-201ENST00000344722 TUBB4BP68371 445 aa20.92■□□□□ 0.94
SMC4-201ENST00000344722 BIN1O00499 593 aa20.92■□□□□ 0.94
SMC4-201ENST00000344722 V9GYY5 206 aaPredicted RBP20.92■□□□□ 0.94
SMC4-201ENST00000344722 KLHL10Q6JEL2 608 aa20.91■□□□□ 0.94
SMC4-201ENST00000344722 ANKRD18AQ8IVF6 992 aa20.91■□□□□ 0.94
SMC4-201ENST00000344722 RRS1Q15050 365 aaKnown RBP20.91■□□□□ 0.94
SMC4-201ENST00000344722 LUZP1Q86V48 1076 aa20.91■□□□□ 0.94
SMC4-201ENST00000344722 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.91■□□□□ 0.947e-44■■■■■ 137.4
SMC4-201ENST00000344722 FKBP4Q02790 459 aaKnown RBP eCLIP20.91■□□□□ 0.94
SMC4-201ENST00000344722 CPLX3Q8WVH0 158 aa20.91■□□□□ 0.94
SMC4-201ENST00000344722 HMG20BQ9P0W2 317 aa20.91■□□□□ 0.94
SMC4-201ENST00000344722 CAPN2P17655 700 aa20.91■□□□□ 0.94
SMC4-201ENST00000344722 ERO1AQ96HE7 468 aa20.91■□□□□ 0.94
SMC4-201ENST00000344722 DACT1Q9NYF0 836 aa20.91■□□□□ 0.94
SMC4-201ENST00000344722 GUCY1B3Q02153 619 aa20.91■□□□□ 0.94
SMC4-201ENST00000344722 FKBP15Q5T1M5 1219 aa20.91■□□□□ 0.94
SMC4-201ENST00000344722 TICAM2Q86XR7 235 aa20.91■□□□□ 0.94
SMC4-201ENST00000344722 NUTM2GQ5VZR2 741 aa20.9■□□□□ 0.94
SMC4-201ENST00000344722 ZFP91Q96JP5 570 aaPredicted RBP20.9■□□□□ 0.94
SMC4-201ENST00000344722 NF2P35240 595 aa20.9■□□□□ 0.94
SMC4-201ENST00000344722 GOLGA1Q92805 767 aa20.9■□□□□ 0.94
SMC4-201ENST00000344722 DNAJC25Q9H1X3 360 aa20.9■□□□□ 0.94
SMC4-201ENST00000344722 CEP112Q8N8E3 955 aa20.9■□□□□ 0.94
SMC4-201ENST00000344722 MCM10Q7L590 875 aa20.9■□□□□ 0.94
SMC4-201ENST00000344722 NAA15Q9BXJ9 866 aaKnown RBP20.9■□□□□ 0.94
SMC4-201ENST00000344722 PHAXQ9H814 394 aaKnown RBP20.9■□□□□ 0.94
SMC4-201ENST00000344722 BOLA2Q9H3K6 86 aa20.89■□□□□ 0.94
SMC4-201ENST00000344722 CTAGE15A4D2H0 777 aa20.89■□□□□ 0.93
SMC4-201ENST00000344722 CTAGE8P0CG41 777 aa20.89■□□□□ 0.93
SMC4-201ENST00000344722 UBASH3AP57075 661 aa20.89■□□□□ 0.93
SMC4-201ENST00000344722 CTAGE6Q86UF2 777 aa20.89■□□□□ 0.93
SMC4-201ENST00000344722 CTAGE4Q8IX94 777 aa20.89■□□□□ 0.93
SMC4-201ENST00000344722 EHBP1Q8NDI1 1231 aa20.89■□□□□ 0.93
SMC4-201ENST00000344722 ZSWIM4Q9H7M6 989 aa20.89■□□□□ 0.93
SMC4-201ENST00000344722 GOLGA6L10A0A0M3HER8 536 aa20.89■□□□□ 0.93
SMC4-201ENST00000344722 GNAT3A8MTJ3 354 aa20.88■□□□□ 0.93
SMC4-201ENST00000344722 CNNM1Q9NRU3 951 aa20.88■□□□□ 0.93
SMC4-201ENST00000344722 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.88■□□□□ 0.93
SMC4-201ENST00000344722 ZGPATQ8N5A5 531 aaKnown RBP20.88■□□□□ 0.93
SMC4-201ENST00000344722 UBAC1Q9BSL1 405 aa20.88■□□□□ 0.93
SMC4-201ENST00000344722 ECHDC1Q9NTX5 307 aa20.88■□□□□ 0.93
SMC4-201ENST00000344722 MTMR7Q9Y216 660 aa20.88■□□□□ 0.93
SMC4-201ENST00000344722 F6X3S4 739 aa20.88■□□□□ 0.93
SMC4-201ENST00000344722 DNM1Q05193 864 aaKnown RBP20.88■□□□□ 0.93
SMC4-201ENST00000344722 RIOK3O14730 519 aaKnown RBP20.88■□□□□ 0.93
SMC4-201ENST00000344722 PDE1AP54750 535 aa20.88■□□□□ 0.93
SMC4-201ENST00000344722 EVA1CP58658 441 aa20.88■□□□□ 0.93
SMC4-201ENST00000344722 CKAP4Q07065 602 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms