RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 TRAPPC3LQ5T215 181 aa10.32□□□□□ -0.76
HMGCR-202ENST00000343975 DDX21Q9NR30 783 aaKnown RBP eCLIP10.32□□□□□ -0.76
HMGCR-202ENST00000343975 KCNQ3O43525 872 aa10.31□□□□□ -0.76
HMGCR-202ENST00000343975 ZNF853P0CG23 659 aa10.31□□□□□ -0.76
HMGCR-202ENST00000343975 BCL9O00512 1426 aa10.31□□□□□ -0.76
HMGCR-202ENST00000343975 GLI3P10071 1580 aa10.31□□□□□ -0.76
HMGCR-202ENST00000343975 PLSCR1O15162 318 aa10.31□□□□□ -0.76
HMGCR-202ENST00000343975 NRAPQ86VF7 1730 aa10.31□□□□□ -0.76
HMGCR-202ENST00000343975 CHPF2Q9P2E5 772 aa10.3□□□□□ -0.76
HMGCR-202ENST00000343975 ZNF521Q96K83 1311 aa10.3□□□□□ -0.76
HMGCR-202ENST00000343975 VAMP4O75379 141 aa10.29□□□□□ -0.76
HMGCR-202ENST00000343975 KRT24Q2M2I5 525 aa10.29□□□□□ -0.76
HMGCR-202ENST00000343975 DZIP3Q86Y13 1208 aaKnown RBP10.29□□□□□ -0.76
HMGCR-202ENST00000343975 C9orf78Q9NZ63 289 aaPredicted RBP10.29□□□□□ -0.76
HMGCR-202ENST00000343975 SUPT16HQ9Y5B9 1047 aaKnown RBP10.29□□□□□ -0.76
HMGCR-202ENST00000343975 CRKLP46109 303 aaKnown RBP10.29□□□□□ -0.76
HMGCR-202ENST00000343975 ITPRIPQ8IWB1 547 aa10.29□□□□□ -0.76
HMGCR-202ENST00000343975 TMX4Q9H1E5 349 aaPredicted RBP10.29□□□□□ -0.76
HMGCR-202ENST00000343975 USP16Q9Y5T5 823 aa10.29□□□□□ -0.76
HMGCR-202ENST00000343975 RGPD2P0DJD1 1756 aa10.29□□□□□ -0.76
HMGCR-202ENST00000343975 A1BGP04217 495 aa10.29□□□□□ -0.76
HMGCR-202ENST00000343975 IL6STP40189 918 aaPredicted RBP10.29□□□□□ -0.76
HMGCR-202ENST00000343975 FLIIQ13045 1269 aa10.29□□□□□ -0.76
HMGCR-202ENST00000343975 SSH1Q8WYL5 1049 aa10.29□□□□□ -0.76
HMGCR-202ENST00000343975 CLUAP1Q96AJ1 413 aa10.29□□□□□ -0.76
HMGCR-202ENST00000343975 RGPD1P0DJD0 1748 aa10.29□□□□□ -0.76
HMGCR-202ENST00000343975 XAGE3Q8WTP9 111 aa10.28□□□□□ -0.76
HMGCR-202ENST00000343975 PTPRCP08575 1304 aa10.28□□□□□ -0.76
HMGCR-202ENST00000343975 ANKRD13DQ6ZTN6 518 aa10.28□□□□□ -0.76
HMGCR-202ENST00000343975 COPS6Q7L5N1 327 aa10.28□□□□□ -0.76
HMGCR-202ENST00000343975 DEFB132Q7Z7B7 95 aa10.28□□□□□ -0.76
HMGCR-202ENST00000343975 DZIP1LQ8IYY4 767 aaKnown RBP10.28□□□□□ -0.76
HMGCR-202ENST00000343975 TSPYL6Q8N831 410 aa10.28□□□□□ -0.76
HMGCR-202ENST00000343975 ADRA2BP18089 450 aa10.28□□□□□ -0.76
HMGCR-202ENST00000343975 RARSP54136 660 aaKnown RBP10.28□□□□□ -0.76
HMGCR-202ENST00000343975 ZBTB3Q9H5J0 574 aa10.28□□□□□ -0.76
HMGCR-202ENST00000343975 POLD1P28340 1107 aa10.27□□□□□ -0.76
HMGCR-202ENST00000343975 RC3H1Q5TC82 1133 aaKnown RBP10.27□□□□□ -0.76
HMGCR-202ENST00000343975 SPINK5Q9NQ38 1064 aaPredicted RBP10.27□□□□□ -0.76
HMGCR-202ENST00000343975 RPS6KA4O75676 772 aa10.27□□□□□ -0.77
HMGCR-202ENST00000343975 ANXA1P04083 346 aa10.27□□□□□ -0.77
HMGCR-202ENST00000343975 CCT4P50991 539 aaKnown RBP10.27□□□□□ -0.77
HMGCR-202ENST00000343975 SRCIN1Q9C0H9 1055 aa10.27□□□□□ -0.77
HMGCR-202ENST00000343975 EZH2Q15910 746 aaKnown RBP10.27□□□□□ -0.77
HMGCR-202ENST00000343975 TBC1D2BQ9UPU7 963 aa10.27□□□□□ -0.77
HMGCR-202ENST00000343975 ZBTB1Q9Y2K1 713 aa10.27□□□□□ -0.77
HMGCR-202ENST00000343975 KCNQ4P56696 695 aa10.26□□□□□ -0.77
HMGCR-202ENST00000343975 BICDL1Q6ZP65 573 aa10.26□□□□□ -0.77
HMGCR-202ENST00000343975 ATF7IPQ6VMQ6 1270 aa10.26□□□□□ -0.77
HMGCR-202ENST00000343975 KLHL34Q8N239 644 aa10.26□□□□□ -0.77
HMGCR-202ENST00000343975 DNAAF4Q8WXU2 420 aa10.26□□□□□ -0.77
HMGCR-202ENST00000343975 NOB1Q9ULX3 412 aaKnown RBP10.26□□□□□ -0.77
HMGCR-202ENST00000343975 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.26□□□□□ -0.77
HMGCR-202ENST00000343975 CYP19A1P11511 503 aaPredicted RBP10.26□□□□□ -0.77
HMGCR-202ENST00000343975 PIP4K2AP48426 406 aaPredicted RBP10.26□□□□□ -0.77
HMGCR-202ENST00000343975 SETDB2Q96T68 719 aa10.26□□□□□ -0.77
HMGCR-202ENST00000343975 FAM177BA6PVY3 158 aa10.25□□□□□ -0.77
HMGCR-202ENST00000343975 TAF7LQ5H9L4 462 aa10.25□□□□□ -0.77
HMGCR-202ENST00000343975 KSR2Q6VAB6 950 aa10.25□□□□□ -0.77
HMGCR-202ENST00000343975 PPP1R42Q7Z4L9 355 aa10.25□□□□□ -0.77
HMGCR-202ENST00000343975 CNTNAP4Q9C0A0 1308 aa10.25□□□□□ -0.77
HMGCR-202ENST00000343975 SSFA2P28290 1259 aa10.25□□□□□ -0.77
HMGCR-202ENST00000343975 DDX19BQ9UMR2 479 aa10.25□□□□□ -0.77
HMGCR-202ENST00000343975 CHMP3Q9Y3E7 222 aa10.25□□□□□ -0.77
HMGCR-202ENST00000343975 PI4KAP2A4QPH2 592 aa10.25□□□□□ -0.77
HMGCR-202ENST00000343975 GNAI3P08754 354 aa10.25□□□□□ -0.77
HMGCR-202ENST00000343975 RRP1P56182 461 aaKnown RBP10.25□□□□□ -0.77
HMGCR-202ENST00000343975 NLGN1Q8N2Q7 840 aa10.25□□□□□ -0.77
HMGCR-202ENST00000343975 PI4KAP1Q8N8J0 262 aa10.25□□□□□ -0.77
HMGCR-202ENST00000343975 LRRC37A3O60309 1634 aa10.24□□□□□ -0.77
HMGCR-202ENST00000343975 BCAR3O75815 825 aa10.24□□□□□ -0.77
HMGCR-202ENST00000343975 PLBD2Q8NHP8 589 aa10.24□□□□□ -0.77
HMGCR-202ENST00000343975 MYD88Q99836 296 aa10.24□□□□□ -0.77
HMGCR-202ENST00000343975 PPP1R1BQ9UD71 204 aaPredicted RBP10.24□□□□□ -0.77
HMGCR-202ENST00000343975 PKD1L3Q7Z443 1732 aa10.24□□□□□ -0.77
HMGCR-202ENST00000343975 ARHGAP45Q92619 1136 aa10.24□□□□□ -0.77
HMGCR-202ENST00000343975 MAP3K2Q9Y2U5 619 aa10.24□□□□□ -0.77
HMGCR-202ENST00000343975 PARP3Q9Y6F1 533 aa10.24□□□□□ -0.77
HMGCR-202ENST00000343975 TRMT2AQ8IZ69 625 aaKnown RBP10.23□□□□□ -0.77
HMGCR-202ENST00000343975 NYXQ9GZU5 481 aa10.23□□□□□ -0.77
HMGCR-202ENST00000343975 NIP7Q9Y221 180 aaKnown RBP eCLIP10.23□□□□□ -0.77
HMGCR-202ENST00000343975 ITPK1Q13572 414 aa10.23□□□□□ -0.77
HMGCR-202ENST00000343975 PDE3AQ14432 1141 aa10.23□□□□□ -0.77
HMGCR-202ENST00000343975 PARP10Q53GL7 1025 aa10.23□□□□□ -0.77
HMGCR-202ENST00000343975 MRPL50Q8N5N7 158 aaKnown RBP10.23□□□□□ -0.77
HMGCR-202ENST00000343975 UPF1Q92900 1129 aaKnown RBP eCLIP10.23□□□□□ -0.779e-14■■■□□ 17.9
HMGCR-202ENST00000343975 HMMRO75330 724 aa10.23□□□□□ -0.77
HMGCR-202ENST00000343975 UBTFL1P0CB47 393 aaPredicted RBP10.23□□□□□ -0.77
HMGCR-202ENST00000343975 GPTP24298 496 aa10.23□□□□□ -0.77
HMGCR-202ENST00000343975 NBPF5PQ86XG9 351 aaPredicted RBP10.23□□□□□ -0.77
HMGCR-202ENST00000343975 CWC25Q9NXE8 425 aaPredicted RBP10.23□□□□□ -0.77
HMGCR-202ENST00000343975 PRAMEF22A3QJZ6 481 aa10.22□□□□□ -0.77
HMGCR-202ENST00000343975 SLC15A2Q16348 729 aa10.22□□□□□ -0.77
HMGCR-202ENST00000343975 LINC00116Q8NCU8 138 aa10.22□□□□□ -0.77
HMGCR-202ENST00000343975 TRMT112Q9UI30 125 aaKnown RBP10.22□□□□□ -0.77
HMGCR-202ENST00000343975 THSD7AQ9UPZ6 1657 aa10.22□□□□□ -0.77
HMGCR-202ENST00000343975 DCAF8L1A6NGE4 600 aa10.22□□□□□ -0.77
HMGCR-202ENST00000343975 ST5P78524 1137 aa10.22□□□□□ -0.77
HMGCR-202ENST00000343975 OS9Q13438 667 aaPredicted RBP10.22□□□□□ -0.77
HMGCR-202ENST00000343975 TPTE2Q6XPS3 522 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms