RNA–Protein interactions for RNA: ENST00000342905.10

NLRC4-201, Transcript of NLR family CARD domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene NLRC4, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-201ENST00000342905 SIK1P57059 783 aa11.28□□□□□ -0.6
NLRC4-201ENST00000342905 TSR2Q969E8 191 aaKnown RBP11.28□□□□□ -0.6
NLRC4-201ENST00000342905 MYH16Q9H6N6 1097 aa11.28□□□□□ -0.6
NLRC4-201ENST00000342905 ATG3Q9NT62 314 aa11.28□□□□□ -0.6
NLRC4-201ENST00000342905 RNMTO43148 476 aaKnown RBP11.27□□□□□ -0.61
NLRC4-201ENST00000342905 HTATSF1O43719 755 aaKnown RBP11.27□□□□□ -0.61
NLRC4-201ENST00000342905 KCNQ4P56696 695 aa11.27□□□□□ -0.61
NLRC4-201ENST00000342905 CALD1Q05682 793 aaKnown RBP11.27□□□□□ -0.61
NLRC4-201ENST00000342905 ZNF827Q17R98 1081 aa11.27□□□□□ -0.61
NLRC4-201ENST00000342905 NFATC2IPQ8NCF5 419 aa11.27□□□□□ -0.61
NLRC4-201ENST00000342905 SLC52A2Q9HAB3 445 aa11.27□□□□□ -0.61
NLRC4-201ENST00000342905 RCAN3Q9UKA8 241 aa11.27□□□□□ -0.61
NLRC4-201ENST00000342905 N4BP2Q86UW6 1770 aaPredicted RBP11.26□□□□□ -0.61
NLRC4-201ENST00000342905 CASZ1Q86V15 1759 aa11.26□□□□□ -0.61
NLRC4-201ENST00000342905 ZNF853P0CG23 659 aa11.26□□□□□ -0.61
NLRC4-201ENST00000342905 CLCN6P51797 869 aa11.26□□□□□ -0.61
NLRC4-201ENST00000342905 GNAI1P63096 354 aa11.26□□□□□ -0.61
NLRC4-201ENST00000342905 RTF1Q92541 710 aaKnown RBP11.26□□□□□ -0.61
NLRC4-201ENST00000342905 IFT57Q9NWB7 429 aa11.26□□□□□ -0.61
NLRC4-201ENST00000342905 LAS1LQ9Y4W2 734 aaKnown RBP11.26□□□□□ -0.61
NLRC4-201ENST00000342905 GTF3C3Q9Y5Q9 886 aa11.26□□□□□ -0.61
NLRC4-201ENST00000342905 QSER1Q2KHR3 1735 aa11.25□□□□□ -0.61
NLRC4-201ENST00000342905 ZNF831Q5JPB2 1677 aa11.25□□□□□ -0.61
NLRC4-201ENST00000342905 LGR6Q9HBX8 967 aa11.25□□□□□ -0.61
NLRC4-201ENST00000342905 TFCP2L1Q9NZI6 479 aa11.25□□□□□ -0.61
NLRC4-201ENST00000342905 CEMIPQ8WUJ3 1361 aa11.25□□□□□ -0.61
NLRC4-201ENST00000342905 RNF123Q5XPI4 1314 aa11.24□□□□□ -0.61
NLRC4-201ENST00000342905 ATP6V1AP38606 617 aa11.24□□□□□ -0.61
NLRC4-201ENST00000342905 EXOSC9Q06265 439 aaKnown RBP11.24□□□□□ -0.61
NLRC4-201ENST00000342905 TEFQ10587 303 aa11.24□□□□□ -0.61
NLRC4-201ENST00000342905 IL17REQ8NFR9 667 aa11.24□□□□□ -0.61
NLRC4-201ENST00000342905 CFAP44Q96MT7 982 aa11.24□□□□□ -0.61
NLRC4-201ENST00000342905 SPON1Q9HCB6 807 aa11.24□□□□□ -0.61
NLRC4-201ENST00000342905 MBIPQ9NS73 344 aa11.24□□□□□ -0.61
NLRC4-201ENST00000342905 C4BP0C0L5 1744 aa11.23□□□□□ -0.61
NLRC4-201ENST00000342905 TAF1LQ8IZX4 1826 aa11.23□□□□□ -0.61
NLRC4-201ENST00000342905 AK7Q96M32 723 aa11.23□□□□□ -0.61
NLRC4-201ENST00000342905 PDGFDQ9GZP0 370 aaPredicted RBP11.23□□□□□ -0.61
NLRC4-201ENST00000342905 MTFR1LQ9H019 292 aa11.23□□□□□ -0.61
NLRC4-201ENST00000342905 SSUH2Q9Y2M2 353 aa11.23□□□□□ -0.61
NLRC4-201ENST00000342905 PNPLA7Q6ZV29 1317 aa11.22□□□□□ -0.61
NLRC4-201ENST00000342905 ITPK1Q13572 414 aa11.22□□□□□ -0.61
NLRC4-201ENST00000342905 LINC00116Q8NCU8 138 aa11.22□□□□□ -0.61
NLRC4-201ENST00000342905 FLAD1Q8NFF5 587 aa11.22□□□□□ -0.61
NLRC4-201ENST00000342905 SLC16A10Q8TF71 515 aa11.22□□□□□ -0.61
NLRC4-201ENST00000342905 CICQ96RK0 1608 aaPredicted RBP11.22□□□□□ -0.61
NLRC4-201ENST00000342905 CHL1O00533 1208 aa11.21□□□□□ -0.61
NLRC4-201ENST00000342905 PTCD1O75127 700 aaKnown RBP11.21□□□□□ -0.61
NLRC4-201ENST00000342905 ZBTB7AO95365 584 aa11.21□□□□□ -0.61
NLRC4-201ENST00000342905 NEFLP07196 543 aa11.21□□□□□ -0.61
NLRC4-201ENST00000342905 RRP1P56182 461 aaKnown RBP11.21□□□□□ -0.61
NLRC4-201ENST00000342905 TUBGCP6Q96RT7 1819 aa11.21□□□□□ -0.62
NLRC4-201ENST00000342905 CNTNAP4Q9C0A0 1308 aa11.21□□□□□ -0.62
NLRC4-201ENST00000342905 KCPQ6ZWJ8 1503 aa11.2□□□□□ -0.62
NLRC4-201ENST00000342905 IRX6P78412 446 aaPredicted RBP11.2□□□□□ -0.62
NLRC4-201ENST00000342905 TTC5Q8N0Z6 440 aa11.2□□□□□ -0.62
NLRC4-201ENST00000342905 SLC4A9Q96Q91 983 aa11.2□□□□□ -0.62
NLRC4-201ENST00000342905 CT47B1P0C2W7 299 aaPredicted RBP11.19□□□□□ -0.62
NLRC4-201ENST00000342905 COL5A3P25940 1745 aaPredicted RBP11.19□□□□□ -0.62
NLRC4-201ENST00000342905 SSFA2P28290 1259 aa11.19□□□□□ -0.62
NLRC4-201ENST00000342905 FKBP8Q14318 412 aa11.19□□□□□ -0.62
NLRC4-201ENST00000342905 RC3H1Q5TC82 1133 aaKnown RBP11.19□□□□□ -0.62
NLRC4-201ENST00000342905 VSIG10Q8N0Z9 540 aa11.19□□□□□ -0.62
NLRC4-201ENST00000342905 MIS18AQ9NYP9 233 aa11.19□□□□□ -0.62
NLRC4-201ENST00000342905 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.18□□□□□ -0.62
NLRC4-201ENST00000342905 GNPATO15228 680 aa11.18□□□□□ -0.62
NLRC4-201ENST00000342905 BCAR3O75815 825 aa11.18□□□□□ -0.62
NLRC4-201ENST00000342905 PRR29P0C7W0 189 aa11.18□□□□□ -0.62
NLRC4-201ENST00000342905 PTGER2P43116 358 aa11.18□□□□□ -0.62
NLRC4-201ENST00000342905 RARSP54136 660 aaKnown RBP11.18□□□□□ -0.62
NLRC4-201ENST00000342905 SLC39A6Q13433 755 aa11.18□□□□□ -0.62
NLRC4-201ENST00000342905 TAF7Q15545 349 aaPredicted RBP11.18□□□□□ -0.62
NLRC4-201ENST00000342905 CHADLQ6NUI6 762 aa11.18□□□□□ -0.62
NLRC4-201ENST00000342905 ZNF790Q6PG37 636 aa11.18□□□□□ -0.62
NLRC4-201ENST00000342905 COL23A1Q86Y22 540 aaPredicted RBP11.18□□□□□ -0.62
NLRC4-201ENST00000342905 TSPYL6Q8N831 410 aa11.18□□□□□ -0.62
NLRC4-201ENST00000342905 PPP1R1BQ9UD71 204 aaPredicted RBP11.18□□□□□ -0.62
NLRC4-201ENST00000342905 TSPYL4Q9UJ04 414 aa11.18□□□□□ -0.62
NLRC4-201ENST00000342905 AFDNP55196 1824 aaKnown RBP11.18□□□□□ -0.62
NLRC4-201ENST00000342905 UBR3Q6ZT12 1888 aa11.18□□□□□ -0.62
NLRC4-201ENST00000342905 TJP1Q07157 1748 aa11.18□□□□□ -0.62
NLRC4-201ENST00000342905 BTBD11A6QL63 1104 aa11.17□□□□□ -0.62
NLRC4-201ENST00000342905 PLIN1O60240 522 aa11.17□□□□□ -0.62
NLRC4-201ENST00000342905 KRT24Q2M2I5 525 aa11.17□□□□□ -0.62
NLRC4-201ENST00000342905 C8orf58Q8NAV2 365 aa11.17□□□□□ -0.62
NLRC4-201ENST00000342905 BABAM1Q9NWV8 329 aa11.17□□□□□ -0.62
NLRC4-201ENST00000342905 RTCBQ9Y3I0 505 aaKnown RBP11.17□□□□□ -0.62
NLRC4-201ENST00000342905 VAMP4O75379 141 aa11.16□□□□□ -0.62
NLRC4-201ENST00000342905 TWISTNBQ3B726 338 aaPredicted RBP11.16□□□□□ -0.62
NLRC4-201ENST00000342905 FMNL2Q96PY5 1086 aa11.16□□□□□ -0.62
NLRC4-201ENST00000342905 SGIP1Q9BQI5 828 aa11.16□□□□□ -0.62
NLRC4-201ENST00000342905 BCL2L13Q9BXK5 485 aa11.16□□□□□ -0.62
NLRC4-201ENST00000342905 HEG1Q9ULI3 1381 aa11.16□□□□□ -0.62
NLRC4-201ENST00000342905 COL24A1Q17RW2 1714 aa11.16□□□□□ -0.62
NLRC4-201ENST00000342905 ELL2O00472 640 aaPredicted RBP11.16□□□□□ -0.62
NLRC4-201ENST00000342905 RPS6KA4O75676 772 aa11.16□□□□□ -0.62
NLRC4-201ENST00000342905 PHF14O94880 888 aa11.16□□□□□ -0.62
NLRC4-201ENST00000342905 POLD1P28340 1107 aa11.16□□□□□ -0.62
NLRC4-201ENST00000342905 CRKLP46109 303 aaKnown RBP11.16□□□□□ -0.62
NLRC4-201ENST00000342905 AMIGO3Q86WK7 504 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms