RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 CLSTN1O94985 981 aa8.49□□□□□ -1.05
VCAN-202ENST00000342785 UQCRHP07919 91 aa8.49□□□□□ -1.05
VCAN-202ENST00000342785 G2E3Q7L622 706 aa8.49□□□□□ -1.05
VCAN-202ENST00000342785 ZGPATQ8N5A5 531 aaKnown RBP8.49□□□□□ -1.05
VCAN-202ENST00000342785 U3KPZ7 1027 aaPredicted RBP8.49□□□□□ -1.05
VCAN-202ENST00000342785 ZNF771Q7L3S4 317 aaPredicted RBP8.49□□□□□ -1.05
VCAN-202ENST00000342785 UBE3BQ7Z3V4 1068 aa8.49□□□□□ -1.05
VCAN-202ENST00000342785 CHL1O00533 1208 aa8.49□□□□□ -1.05
VCAN-202ENST00000342785 ZSCAN23Q3MJ62 389 aa8.49□□□□□ -1.05
VCAN-202ENST00000342785 CCDC47Q96A33 483 aaKnown RBP8.49□□□□□ -1.05
VCAN-202ENST00000342785 USP26Q9BXU7 913 aa8.49□□□□□ -1.05
VCAN-202ENST00000342785 ZFYVE9O95405 1425 aa8.48□□□□□ -1.05
VCAN-202ENST00000342785 IDH1O75874 414 aaKnown RBP8.48□□□□□ -1.05
VCAN-202ENST00000342785 CLCN1P35523 988 aa8.48□□□□□ -1.05
VCAN-202ENST00000342785 TCEANC2Q96MN5 208 aa8.48□□□□□ -1.05
VCAN-202ENST00000342785 IFIT1P09914 478 aaKnown RBP8.48□□□□□ -1.05
VCAN-202ENST00000342785 CKAP2LQ8IYA6 745 aa8.48□□□□□ -1.05
VCAN-202ENST00000342785 CCDC112Q8NEF3 446 aa8.48□□□□□ -1.05
VCAN-202ENST00000342785 PCMTD1Q96MG8 357 aaPredicted RBP8.48□□□□□ -1.05
VCAN-202ENST00000342785 FLT4P35916 1363 aa8.48□□□□□ -1.05
VCAN-202ENST00000342785 GJB2P29033 226 aa8.48□□□□□ -1.05
VCAN-202ENST00000342785 TRIM22Q8IYM9 498 aa8.48□□□□□ -1.05
VCAN-202ENST00000342785 ATP5J2-PTCD1G3V325 749 aa8.48□□□□□ -1.05
VCAN-202ENST00000342785 NACAP1Q9BZK3 213 aa8.48□□□□□ -1.05
VCAN-202ENST00000342785 VPS53Q5VIR6 699 aa8.47□□□□□ -1.05
VCAN-202ENST00000342785 MPHOSPH8Q99549 860 aa8.47□□□□□ -1.05
VCAN-202ENST00000342785 PLA2R1Q13018 1463 aa8.47□□□□□ -1.05
VCAN-202ENST00000342785 RRP9O43818 475 aaKnown RBP8.47□□□□□ -1.05
VCAN-202ENST00000342785 BRMS1Q9HCU9 246 aa8.47□□□□□ -1.05
VCAN-202ENST00000342785 ARGLU1Q9NWB6 273 aaPredicted RBP8.47□□□□□ -1.05
VCAN-202ENST00000342785 ZSCAN25Q6NSZ9 544 aa8.47□□□□□ -1.05
VCAN-202ENST00000342785 STK11IPQ8N1F8 1099 aa8.47□□□□□ -1.05
VCAN-202ENST00000342785 A0A0U1RQG5 324 aaPredicted RBP8.47□□□□□ -1.05
VCAN-202ENST00000342785 JARID2Q92833 1246 aaPredicted RBP8.47□□□□□ -1.05
VCAN-202ENST00000342785 HCLS1P14317 486 aaPredicted RBP8.47□□□□□ -1.05
VCAN-202ENST00000342785 IMMTQ16891 758 aaKnown RBP8.47□□□□□ -1.05
VCAN-202ENST00000342785 ANKRD24Q8TF21 1146 aa8.47□□□□□ -1.05
VCAN-202ENST00000342785 MTMR7Q9Y216 660 aa8.47□□□□□ -1.05
VCAN-202ENST00000342785 ALDH1L1O75891 902 aa8.47□□□□□ -1.05
VCAN-202ENST00000342785 SERPINC1P01008 464 aa8.47□□□□□ -1.05
VCAN-202ENST00000342785 GPS2Q13227 327 aa8.47□□□□□ -1.05
VCAN-202ENST00000342785 RAD21O60216 631 aa8.46□□□□□ -1.05
VCAN-202ENST00000342785 TNNT3P45378 269 aaPredicted RBP8.46□□□□□ -1.05
VCAN-202ENST00000342785 NECAB1Q8N987 351 aa8.46□□□□□ -1.05
VCAN-202ENST00000342785 ZBTB3Q9H5J0 574 aa8.46□□□□□ -1.05
VCAN-202ENST00000342785 GCC2Q8IWJ2 1684 aa8.46□□□□□ -1.05
VCAN-202ENST00000342785 CHMLP26374 656 aa8.46□□□□□ -1.05
VCAN-202ENST00000342785 LRSAM1Q6UWE0 723 aa8.46□□□□□ -1.05
VCAN-202ENST00000342785 KSR2Q6VAB6 950 aa8.46□□□□□ -1.06
VCAN-202ENST00000342785 ANKRD13DQ6ZTN6 518 aa8.46□□□□□ -1.06
VCAN-202ENST00000342785 IFNL2Q8IZJ0 200 aa8.46□□□□□ -1.06
VCAN-202ENST00000342785 LINS1Q8NG48 757 aa8.46□□□□□ -1.06
VCAN-202ENST00000342785 NOC3LQ8WTT2 800 aaKnown RBP8.46□□□□□ -1.06
VCAN-202ENST00000342785 ZSCAN22P10073 491 aaPredicted RBP8.46□□□□□ -1.06
VCAN-202ENST00000342785 UBE2HP62256 183 aa8.46□□□□□ -1.06
VCAN-202ENST00000342785 KRT28Q7Z3Y7 464 aa8.46□□□□□ -1.06
VCAN-202ENST00000342785 PHAXQ9H814 394 aaKnown RBP8.46□□□□□ -1.06
VCAN-202ENST00000342785 GUCY1B3Q02153 619 aa8.46□□□□□ -1.06
VCAN-202ENST00000342785 METTL24Q5JXM2 366 aa8.46□□□□□ -1.06
VCAN-202ENST00000342785 PA2G4Q9UQ80 394 aaKnown RBP8.46□□□□□ -1.06
VCAN-202ENST00000342785 TARBP1Q13395 1621 aaKnown RBP8.46□□□□□ -1.06
VCAN-202ENST00000342785 MAST1Q9Y2H9 1570 aa8.46□□□□□ -1.06
VCAN-202ENST00000342785 SOS1Q07889 1333 aaPredicted RBP8.45□□□□□ -1.06
VCAN-202ENST00000342785 CDKL5O76039 1030 aa8.45□□□□□ -1.06
VCAN-202ENST00000342785 PRIM1P49642 420 aaKnown RBP8.45□□□□□ -1.06
VCAN-202ENST00000342785 SLC39A6Q13433 755 aa8.45□□□□□ -1.06
VCAN-202ENST00000342785 COPS6Q7L5N1 327 aa8.45□□□□□ -1.06
VCAN-202ENST00000342785 NUP133Q8WUM0 1156 aa8.45□□□□□ -1.06
VCAN-202ENST00000342785 SNRKQ9NRH2 765 aa8.45□□□□□ -1.06
VCAN-202ENST00000342785 KIF21AQ7Z4S6 1674 aa8.45□□□□□ -1.06
VCAN-202ENST00000342785 GOLIM4O00461 696 aa8.45□□□□□ -1.06
VCAN-202ENST00000342785 HMGB1P09429 215 aaKnown RBP8.45□□□□□ -1.06
VCAN-202ENST00000342785 XAGE3Q8WTP9 111 aa8.45□□□□□ -1.06
VCAN-202ENST00000342785 DDX19AQ9NUU7 478 aaKnown RBP8.45□□□□□ -1.06
VCAN-202ENST00000342785 AKAP2Q9Y2D5 859 aa8.45□□□□□ -1.06
VCAN-202ENST00000342785 RBM8AQ9Y5S9 174 aaKnown RBP8.45□□□□□ -1.06
VCAN-202ENST00000342785 GRM8O00222 908 aa8.45□□□□□ -1.06
VCAN-202ENST00000342785 BRF1Q92994 677 aa8.45□□□□□ -1.06
VCAN-202ENST00000342785 PPFIA3O75145 1194 aa8.45□□□□□ -1.06
VCAN-202ENST00000342785 LRRC59Q96AG4 307 aaKnown RBP8.45□□□□□ -1.06
VCAN-202ENST00000342785 ATP10AO60312 1499 aa8.45□□□□□ -1.06
VCAN-202ENST00000342785 ABCC1P33527 1531 aa8.44□□□□□ -1.06
VCAN-202ENST00000342785 ATP7AQ04656 1500 aa8.44□□□□□ -1.06
VCAN-202ENST00000342785 ADCY5O95622 1261 aa8.44□□□□□ -1.06
VCAN-202ENST00000342785 STARD3NLO95772 234 aa8.44□□□□□ -1.06
VCAN-202ENST00000342785 MCM5P33992 734 aa8.44□□□□□ -1.06
VCAN-202ENST00000342785 CCT2P78371 535 aaKnown RBP8.44□□□□□ -1.06
VCAN-202ENST00000342785 GIMAP6Q6P9H5 292 aa8.44□□□□□ -1.06
VCAN-202ENST00000342785 DDX46Q7L014 1031 aaKnown RBP8.44□□□□□ -1.06
VCAN-202ENST00000342785 AIDAQ96BJ3 306 aa8.44□□□□□ -1.06
VCAN-202ENST00000342785 NEK1Q96PY6 1258 aa8.44□□□□□ -1.06
VCAN-202ENST00000342785 GNL3LQ9NVN8 582 aaKnown RBP8.44□□□□□ -1.06
VCAN-202ENST00000342785 CCDC69A6NI79 296 aa8.44□□□□□ -1.06
VCAN-202ENST00000342785 USP48Q86UV5 1035 aa8.44□□□□□ -1.06
VCAN-202ENST00000342785 CEP170Q5SW79 1584 aa8.44□□□□□ -1.06
VCAN-202ENST00000342785 SNRPA1P09661 255 aaKnown RBP8.44□□□□□ -1.06
VCAN-202ENST00000342785 ZNF165P49910 485 aa8.44□□□□□ -1.06
VCAN-202ENST00000342785 CHRNA2Q15822 529 aa8.44□□□□□ -1.06
VCAN-202ENST00000342785 C8orf76Q96K31 380 aa8.44□□□□□ -1.06
VCAN-202ENST00000342785 KCNA6P17658 529 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms