RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 PHF23Q9BUL5 403 aaPredicted RBP18.49■□□□□ 0.55
CARMIL3-201ENST00000342740 ZPR1O75312 459 aa18.48■□□□□ 0.55
CARMIL3-201ENST00000342740 CCDC83Q8IWF9 413 aa18.48■□□□□ 0.55
CARMIL3-201ENST00000342740 HSPA2P54652 639 aa18.48■□□□□ 0.55
CARMIL3-201ENST00000342740 XAGE3Q8WTP9 111 aa18.48■□□□□ 0.55
CARMIL3-201ENST00000342740 DDX11Q96FC9 970 aa18.48■□□□□ 0.55
CARMIL3-201ENST00000342740 ABCA8O94911 1581 aa18.48■□□□□ 0.55
CARMIL3-201ENST00000342740 EVI5LQ96CN4 794 aa18.47■□□□□ 0.55
CARMIL3-201ENST00000342740 ARHGEF5Q12774 1597 aa18.47■□□□□ 0.55
CARMIL3-201ENST00000342740 TRPM2O94759 1503 aa18.47■□□□□ 0.55
CARMIL3-201ENST00000342740 TBC1D32Q96NH3 1257 aa18.47■□□□□ 0.55
CARMIL3-201ENST00000342740 ANKRD18BA2A2Z9 1011 aa18.47■□□□□ 0.55
CARMIL3-201ENST00000342740 HOXC9P31274 260 aa18.47■□□□□ 0.55
CARMIL3-201ENST00000342740 NEO1Q92859 1461 aa18.47■□□□□ 0.55
CARMIL3-201ENST00000342740 CDKL5O76039 1030 aa18.47■□□□□ 0.55
CARMIL3-201ENST00000342740 FERMT3Q86UX7 667 aa18.47■□□□□ 0.55
CARMIL3-201ENST00000342740 PDIA4P13667 645 aaKnown RBP18.46■□□□□ 0.55
CARMIL3-201ENST00000342740 LDHAL6AQ6ZMR3 332 aa18.46■□□□□ 0.55
CARMIL3-201ENST00000342740 CCDC39Q9UFE4 941 aa18.46■□□□□ 0.55
CARMIL3-201ENST00000342740 ATP2B2Q01814 1243 aa18.46■□□□□ 0.55
CARMIL3-201ENST00000342740 SPATA32Q96LK8 384 aa18.46■□□□□ 0.55
CARMIL3-201ENST00000342740 BRPF3Q9ULD4 1205 aa18.46■□□□□ 0.55
CARMIL3-201ENST00000342740 CCDC43Q96MW1 224 aaKnown RBP18.45■□□□□ 0.54
CARMIL3-201ENST00000342740 CFAP65Q6ZU64 1925 aaKnown RBP18.45■□□□□ 0.54
CARMIL3-201ENST00000342740 PTPRTO14522 1441 aa18.45■□□□□ 0.54
CARMIL3-201ENST00000342740 CCDC192P0DO97 292 aa18.45■□□□□ 0.54
CARMIL3-201ENST00000342740 IL13P35225 146 aa18.45■□□□□ 0.54
CARMIL3-201ENST00000342740 KSR2Q6VAB6 950 aa18.45■□□□□ 0.54
CARMIL3-201ENST00000342740 IP6K1Q92551 441 aa18.45■□□□□ 0.54
CARMIL3-201ENST00000342740 TNMDQ9H2S6 317 aa18.45■□□□□ 0.54
CARMIL3-201ENST00000342740 CFAP45Q9UL16 551 aa18.45■□□□□ 0.54
CARMIL3-201ENST00000342740 SPATA31E1Q6ZUB1 1445 aa18.45■□□□□ 0.54
CARMIL3-201ENST00000342740 SDSP20132 328 aa18.45■□□□□ 0.54
CARMIL3-201ENST00000342740 NCBP3Q53F19 620 aaKnown RBP18.45■□□□□ 0.54
CARMIL3-201ENST00000342740 CAVIN4Q5BKX8 364 aa18.45■□□□□ 0.54
CARMIL3-201ENST00000342740 ZBTB40Q9NUA8 1239 aa18.44■□□□□ 0.54
CARMIL3-201ENST00000342740 GCC2Q8IWJ2 1684 aa18.44■□□□□ 0.54
CARMIL3-201ENST00000342740 PDE4CQ08493 712 aa18.44■□□□□ 0.54
CARMIL3-201ENST00000342740 NFATC2IPQ8NCF5 419 aa18.44■□□□□ 0.54
CARMIL3-201ENST00000342740 ALDH1L1O75891 902 aa18.44■□□□□ 0.54
CARMIL3-201ENST00000342740 ATP8B2P98198 1209 aa18.44■□□□□ 0.54
CARMIL3-201ENST00000342740 EDC4Q6P2E9 1401 aaKnown RBP18.44■□□□□ 0.54
CARMIL3-201ENST00000342740 PDE1AP54750 535 aa18.44■□□□□ 0.54
CARMIL3-201ENST00000342740 SF3B2Q13435 895 aaKnown RBP18.44■□□□□ 0.54
CARMIL3-201ENST00000342740 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.44■□□□□ 0.54
CARMIL3-201ENST00000342740 TXLNAP40222 546 aa18.43■□□□□ 0.54
CARMIL3-201ENST00000342740 GRM8O00222 908 aa18.43■□□□□ 0.54
CARMIL3-201ENST00000342740 MAP3K12Q12852 859 aa18.43■□□□□ 0.54
CARMIL3-201ENST00000342740 GRPEL1Q9HAV7 217 aa18.43■□□□□ 0.54
CARMIL3-201ENST00000342740 LIMCH1Q9UPQ0 1083 aa18.43■□□□□ 0.54
CARMIL3-201ENST00000342740 SH2B1Q9NRF2 756 aaPredicted RBP18.43■□□□□ 0.54
CARMIL3-201ENST00000342740 GOLIM4O00461 696 aa18.42■□□□□ 0.54
CARMIL3-201ENST00000342740 SNRKQ9NRH2 765 aa18.42■□□□□ 0.54
CARMIL3-201ENST00000342740 MAP3K5Q99683 1374 aa18.42■□□□□ 0.54
CARMIL3-201ENST00000342740 NAPBQ9H115 298 aa18.42■□□□□ 0.54
CARMIL3-201ENST00000342740 PPP1R1BQ9UD71 204 aaPredicted RBP18.42■□□□□ 0.54
CARMIL3-201ENST00000342740 SLC5A1P13866 664 aa18.41■□□□□ 0.54
CARMIL3-201ENST00000342740 PIP4K2AP48426 406 aaPredicted RBP18.41■□□□□ 0.54
CARMIL3-201ENST00000342740 LINS1Q8NG48 757 aa18.41■□□□□ 0.54
CARMIL3-201ENST00000342740 MINDY4BA8MYZ0 360 aa18.41■□□□□ 0.54
CARMIL3-201ENST00000342740 CCDC173Q0VFZ6 552 aa18.41■□□□□ 0.54
CARMIL3-201ENST00000342740 C16orf71Q8IYS4 520 aaPredicted RBP18.41■□□□□ 0.54
CARMIL3-201ENST00000342740 ORAI2Q96SN7 254 aa18.41■□□□□ 0.54
CARMIL3-201ENST00000342740 YEATS2Q9ULM3 1422 aa18.4■□□□□ 0.54
CARMIL3-201ENST00000342740 PDILTQ8N807 584 aa18.4■□□□□ 0.54
CARMIL3-201ENST00000342740 GOLGA6L1Q8N7Z2 621 aa18.4■□□□□ 0.54
CARMIL3-201ENST00000342740 LARP6Q9BRS8 491 aaKnown RBP18.4■□□□□ 0.54
CARMIL3-201ENST00000342740 DCTPP1Q9H773 170 aa18.4■□□□□ 0.54
CARMIL3-201ENST00000342740 TRIM35Q9UPQ4 493 aa18.4■□□□□ 0.54
CARMIL3-201ENST00000342740 SMC2O95347 1197 aa18.4■□□□□ 0.54
CARMIL3-201ENST00000342740 RBM5P52756 815 aaKnown RBP eCLIP18.4■□□□□ 0.54
CARMIL3-201ENST00000342740 HMGB1P09429 215 aaKnown RBP18.4■□□□□ 0.54
CARMIL3-201ENST00000342740 SMC5Q8IY18 1101 aa18.4■□□□□ 0.54
CARMIL3-201ENST00000342740 SSFA2P28290 1259 aa18.39■□□□□ 0.54
CARMIL3-201ENST00000342740 TMEM2Q9UHN6 1383 aa18.39■□□□□ 0.53
CARMIL3-201ENST00000342740 HMGB2P26583 209 aaKnown RBP18.39■□□□□ 0.53
CARMIL3-201ENST00000342740 HSP90AA2PQ14568 343 aaPredicted RBP18.39■□□□□ 0.53
CARMIL3-201ENST00000342740 A0A0U1RQG5 324 aaPredicted RBP18.39■□□□□ 0.53
CARMIL3-201ENST00000342740 CEP85Q6P2H3 762 aa18.39■□□□□ 0.53
CARMIL3-201ENST00000342740 ADGBQ8N7X0 1667 aa18.39■□□□□ 0.53
CARMIL3-201ENST00000342740 ZNF213O14771 459 aa18.39■□□□□ 0.53
CARMIL3-201ENST00000342740 LMBR1LQ6UX01 489 aa18.39■□□□□ 0.53
CARMIL3-201ENST00000342740 KDM6BO15054 1643 aa18.38■□□□□ 0.53
CARMIL3-201ENST00000342740 NUP62CLQ9H1M0 184 aa18.38■□□□□ 0.53
CARMIL3-201ENST00000342740 IL2RBP14784 551 aa18.38■□□□□ 0.53
CARMIL3-201ENST00000342740 LTKP29376 864 aa18.38■□□□□ 0.53
CARMIL3-201ENST00000342740 TNPO1Q92973 898 aaKnown RBP18.38■□□□□ 0.53
CARMIL3-201ENST00000342740 CDK5RAP3Q96JB5 506 aa18.38■□□□□ 0.53
CARMIL3-201ENST00000342740 ANKIB1Q9P2G1 1089 aa18.38■□□□□ 0.53
CARMIL3-201ENST00000342740 KAT6BQ8WYB5 2073 aa18.37■□□□□ 0.53
CARMIL3-201ENST00000342740 C8orf34Q49A92 452 aa18.37■□□□□ 0.53
CARMIL3-201ENST00000342740 DCAF5Q96JK2 942 aa18.37■□□□□ 0.53
CARMIL3-201ENST00000342740 SBNO1A3KN83 1393 aa18.37■□□□□ 0.53
CARMIL3-201ENST00000342740 SOGA3Q5TF21 947 aa18.37■□□□□ 0.53
CARMIL3-201ENST00000342740 ZSCAN29Q8IWY8 852 aaPredicted RBP18.37■□□□□ 0.53
CARMIL3-201ENST00000342740 NOL7Q9UMY1 257 aaKnown RBP18.37■□□□□ 0.53
CARMIL3-201ENST00000342740 MYO5CQ9NQX4 1742 aa18.37■□□□□ 0.53
CARMIL3-201ENST00000342740 PLEKHG3A1L390 1219 aa18.37■□□□□ 0.53
CARMIL3-201ENST00000342740 WASF1Q92558 559 aa18.37■□□□□ 0.53
CARMIL3-201ENST00000342740 SPC24Q8NBT2 197 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms