RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 ATP10AO60312 1499 aa14.72□□□□□ -0.05
SNRNP48-201ENST00000342415 PPP4R3BQ5MIZ7 849 aa14.72□□□□□ -0.05
SNRNP48-201ENST00000342415 ERC1Q8IUD2 1116 aa14.72□□□□□ -0.05
SNRNP48-201ENST00000342415 LRRIQ1Q96JM4 1722 aa14.71□□□□□ -0.05
SNRNP48-201ENST00000342415 TTC21BQ7Z4L5 1316 aa14.71□□□□□ -0.05
SNRNP48-201ENST00000342415 AMOTL2Q9Y2J4 779 aa14.71□□□□□ -0.05
SNRNP48-201ENST00000342415 MAST1Q9Y2H9 1570 aa14.71□□□□□ -0.05
SNRNP48-201ENST00000342415 ATP8B2P98198 1209 aa14.71□□□□□ -0.05
SNRNP48-201ENST00000342415 MNS1Q8NEH6 495 aa14.71□□□□□ -0.05
SNRNP48-201ENST00000342415 ZSCAN31Q96LW9 406 aaPredicted RBP14.71□□□□□ -0.05
SNRNP48-201ENST00000342415 PPP6R1Q9UPN7 881 aa14.71□□□□□ -0.05
SNRNP48-201ENST00000342415 UBE2HP62256 183 aa14.71□□□□□ -0.06
SNRNP48-201ENST00000342415 CPLX2Q6PUV4 134 aaKnown RBP14.71□□□□□ -0.06
SNRNP48-201ENST00000342415 ECHDC1Q9NTX5 307 aa14.71□□□□□ -0.06
SNRNP48-201ENST00000342415 PPIP5K1Q6PFW1 1433 aa14.71□□□□□ -0.06
SNRNP48-201ENST00000342415 ISM2Q6H9L7 571 aa14.7□□□□□ -0.06
SNRNP48-201ENST00000342415 MAP3K2Q9Y2U5 619 aa14.7□□□□□ -0.06
SNRNP48-201ENST00000342415 TRIM29Q14134 588 aa14.7□□□□□ -0.06
SNRNP48-201ENST00000342415 SYT1P21579 422 aa14.7□□□□□ -0.06
SNRNP48-201ENST00000342415 TPM3P06753 285 aa14.7□□□□□ -0.06
SNRNP48-201ENST00000342415 GPT2Q8TD30 523 aa14.7□□□□□ -0.06
SNRNP48-201ENST00000342415 BIN1O00499 593 aa14.69□□□□□ -0.06
SNRNP48-201ENST00000342415 EVA1CP58658 441 aa14.69□□□□□ -0.06
SNRNP48-201ENST00000342415 ASXL2Q76L83 1435 aa14.69□□□□□ -0.06
SNRNP48-201ENST00000342415 ZBTB9Q96C00 473 aa14.69□□□□□ -0.06
SNRNP48-201ENST00000342415 HIP1O00291 1037 aa14.69□□□□□ -0.06
SNRNP48-201ENST00000342415 ZNF165P49910 485 aa14.69□□□□□ -0.06
SNRNP48-201ENST00000342415 CCDC186Q7Z3E2 898 aa14.69□□□□□ -0.06
SNRNP48-201ENST00000342415 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.69□□□□□ -0.06
SNRNP48-201ENST00000342415 V9GYY5 206 aaPredicted RBP14.69□□□□□ -0.06
SNRNP48-201ENST00000342415 SAMD9LQ8IVG5 1584 aa14.69□□□□□ -0.06
SNRNP48-201ENST00000342415 ANKRD1Q15327 319 aa14.69□□□□□ -0.06
SNRNP48-201ENST00000342415 CHMP4CQ96CF2 233 aa14.69□□□□□ -0.06
SNRNP48-201ENST00000342415 EYA1Q99502 592 aa14.69□□□□□ -0.06
SNRNP48-201ENST00000342415 DACT1Q9NYF0 836 aa14.69□□□□□ -0.06
SNRNP48-201ENST00000342415 TNNT1P13805 278 aa14.68□□□□□ -0.06
SNRNP48-201ENST00000342415 NOL7Q9UMY1 257 aaKnown RBP14.68□□□□□ -0.06
SNRNP48-201ENST00000342415 ATP5J2-PTCD1G3V325 749 aa14.68□□□□□ -0.06
SNRNP48-201ENST00000342415 PTCD1O75127 700 aaKnown RBP14.68□□□□□ -0.06
SNRNP48-201ENST00000342415 CWF19L2Q2TBE0 894 aaKnown RBP14.68□□□□□ -0.06
SNRNP48-201ENST00000342415 RRP12Q5JTH9 1297 aaKnown RBP14.68□□□□□ -0.06
SNRNP48-201ENST00000342415 CLIP2Q9UDT6 1046 aa14.68□□□□□ -0.06
SNRNP48-201ENST00000342415 ERICH4A6NGS2 130 aa14.68□□□□□ -0.06
SNRNP48-201ENST00000342415 MYD88Q99836 296 aa14.68□□□□□ -0.06
SNRNP48-201ENST00000342415 NSFL1CQ9UNZ2 370 aaKnown RBP14.68□□□□□ -0.06
SNRNP48-201ENST00000342415 NAT10Q9H0A0 1025 aaKnown RBP14.67□□□□□ -0.06
SNRNP48-201ENST00000342415 BRPF1P55201 1214 aaPredicted RBP14.67□□□□□ -0.06
SNRNP48-201ENST00000342415 RBM8AQ9Y5S9 174 aaKnown RBP14.67□□□□□ -0.06
SNRNP48-201ENST00000342415 DYNC1I1O14576 645 aa14.67□□□□□ -0.06
SNRNP48-201ENST00000342415 F13A1P00488 732 aa14.67□□□□□ -0.06
SNRNP48-201ENST00000342415 ZNF445P59923 1031 aa14.67□□□□□ -0.06
SNRNP48-201ENST00000342415 PRDM15P57071 1507 aaPredicted RBP14.66□□□□□ -0.06
SNRNP48-201ENST00000342415 CHL1O00533 1208 aa14.66□□□□□ -0.06
SNRNP48-201ENST00000342415 SKIDA1Q1XH10 827 aa14.66□□□□□ -0.06
SNRNP48-201ENST00000342415 LUZP1Q86V48 1076 aa14.66□□□□□ -0.06
SNRNP48-201ENST00000342415 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.66□□□□□ -0.06
SNRNP48-201ENST00000342415 SERPINC1P01008 464 aa14.66□□□□□ -0.06
SNRNP48-201ENST00000342415 MAP3K19Q56UN5 1328 aa14.66□□□□□ -0.06
SNRNP48-201ENST00000342415 ABCC2Q92887 1545 aa14.66□□□□□ -0.06
SNRNP48-201ENST00000342415 ANO6Q4KMQ2 910 aa14.66□□□□□ -0.06
SNRNP48-201ENST00000342415 DDX46Q7L014 1031 aaKnown RBP14.66□□□□□ -0.06
SNRNP48-201ENST00000342415 SCAND2PQ9GZW5 306 aaPredicted RBP14.66□□□□□ -0.06
SNRNP48-201ENST00000342415 SNRKQ9NRH2 765 aa14.66□□□□□ -0.06
SNRNP48-201ENST00000342415 MTMR7Q9Y216 660 aa14.66□□□□□ -0.06
SNRNP48-201ENST00000342415 SLC39A6Q13433 755 aa14.65□□□□□ -0.06
SNRNP48-201ENST00000342415 PROSER2Q86WR7 435 aaPredicted RBP14.65□□□□□ -0.06
SNRNP48-201ENST00000342415 UNC5CLQ8IV45 518 aa14.65□□□□□ -0.06
SNRNP48-201ENST00000342415 CCDC82Q8N4S0 544 aa14.65□□□□□ -0.06
SNRNP48-201ENST00000342415 CFAP45Q9UL16 551 aa14.65□□□□□ -0.06
SNRNP48-201ENST00000342415 AKAP17AQ02040 695 aaKnown RBP14.65□□□□□ -0.06
SNRNP48-201ENST00000342415 BRF1Q92994 677 aa14.65□□□□□ -0.06
SNRNP48-201ENST00000342415 PUS7Q96PZ0 661 aaKnown RBP14.65□□□□□ -0.06
SNRNP48-201ENST00000342415 DNAJC25Q9H1X3 360 aa14.65□□□□□ -0.06
SNRNP48-201ENST00000342415 TMX1Q9H3N1 280 aa14.65□□□□□ -0.06
SNRNP48-201ENST00000342415 SH2B1Q9NRF2 756 aaPredicted RBP14.65□□□□□ -0.06
SNRNP48-201ENST00000342415 NBPF7P0C2Y1 421 aaPredicted RBP14.65□□□□□ -0.06
SNRNP48-201ENST00000342415 PTGS1P23219 599 aa14.65□□□□□ -0.06
SNRNP48-201ENST00000342415 GTF2E1P29083 439 aaPredicted RBP14.65□□□□□ -0.06
SNRNP48-201ENST00000342415 MCM5P33992 734 aa14.65□□□□□ -0.06
SNRNP48-201ENST00000342415 KLHDC4Q8TBB5 520 aa14.65□□□□□ -0.06
SNRNP48-201ENST00000342415 ABCC4O15439 1325 aa14.65□□□□□ -0.06
SNRNP48-201ENST00000342415 YTHDC2Q9H6S0 1430 aaKnown RBP14.65□□□□□ -0.06
SNRNP48-201ENST00000342415 HAND2P61296 217 aa14.64□□□□□ -0.07
SNRNP48-201ENST00000342415 THEMISQ8N1K5 641 aaPredicted RBP14.64□□□□□ -0.07
SNRNP48-201ENST00000342415 LRRC59Q96AG4 307 aaKnown RBP14.64□□□□□ -0.07
SNRNP48-201ENST00000342415 DBF4Q9UBU7 674 aaPredicted RBP14.64□□□□□ -0.07
SNRNP48-201ENST00000342415 NDUFB9Q9Y6M9 179 aa14.64□□□□□ -0.07
SNRNP48-201ENST00000342415 ZNF518AQ6AHZ1 1483 aa14.64□□□□□ -0.07
SNRNP48-201ENST00000342415 POLR3DP05423 398 aaPredicted RBP14.64□□□□□ -0.07
SNRNP48-201ENST00000342415 CHST3Q7LGC8 479 aa14.64□□□□□ -0.07
SNRNP48-201ENST00000342415 ZNF396Q96N95 335 aaPredicted RBP14.64□□□□□ -0.07
SNRNP48-201ENST00000342415 RIMS2Q9UQ26 1411 aa14.64□□□□□ -0.07
SNRNP48-201ENST00000342415 TRERF1Q96PN7 1200 aa14.64□□□□□ -0.07
SNRNP48-201ENST00000342415 ANAPC15P60006 121 aa14.63□□□□□ -0.07
SNRNP48-201ENST00000342415 PTPN14Q15678 1187 aa14.63□□□□□ -0.07
SNRNP48-201ENST00000342415 CCDC34Q96HJ3 373 aa14.63□□□□□ -0.07
SNRNP48-201ENST00000342415 UBE3BQ7Z3V4 1068 aa14.63□□□□□ -0.07
SNRNP48-201ENST00000342415 CEP57L1Q8IYX8 460 aa14.63□□□□□ -0.07
SNRNP48-201ENST00000342415 NPATQ14207 1427 aa14.63□□□□□ -0.07
SNRNP48-201ENST00000342415 HSP90AA4PQ58FG1 418 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms