RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 SUPT6HQ7KZ85 1726 aaKnown RBP17.69■□□□□ 0.42
COL11A2-201ENST00000341947 KLHL10Q6JEL2 608 aa17.69■□□□□ 0.42
COL11A2-201ENST00000341947 NLRP5P59047 1200 aa17.69■□□□□ 0.42
COL11A2-201ENST00000341947 POLA1P09884 1462 aaPredicted RBP17.68■□□□□ 0.42
COL11A2-201ENST00000341947 TMEM87AQ8NBN3 555 aa17.68■□□□□ 0.42
COL11A2-201ENST00000341947 GOLGA8AA7E2F4 631 aa17.68■□□□□ 0.42
COL11A2-201ENST00000341947 GOLGA8BA8MQT2 603 aa17.68■□□□□ 0.42
COL11A2-201ENST00000341947 PPM1FP49593 454 aaPredicted RBP17.68■□□□□ 0.42
COL11A2-201ENST00000341947 CATIPQ7Z7H3 387 aa17.68■□□□□ 0.42
COL11A2-201ENST00000341947 ABCC11Q96J66 1382 aa17.68■□□□□ 0.42
COL11A2-201ENST00000341947 ZSCAN12O43309 604 aa17.68■□□□□ 0.42
COL11A2-201ENST00000341947 CCDC141Q6ZP82 1450 aa17.68■□□□□ 0.42
COL11A2-201ENST00000341947 DNAAF4Q8WXU2 420 aa17.68■□□□□ 0.42
COL11A2-201ENST00000341947 GBP3Q9H0R5 595 aa17.68■□□□□ 0.42
COL11A2-201ENST00000341947 A0A087WZG4 1122 aa17.68■□□□□ 0.42
COL11A2-201ENST00000341947 MYCNP04198 464 aaPredicted RBP17.67■□□□□ 0.42
COL11A2-201ENST00000341947 SCAND2PQ9GZW5 306 aaPredicted RBP17.67■□□□□ 0.42
COL11A2-201ENST00000341947 ZNF219Q9P2Y4 722 aaPredicted RBP17.67■□□□□ 0.42
COL11A2-201ENST00000341947 PHF8Q9UPP1 1060 aa17.67■□□□□ 0.42
COL11A2-201ENST00000341947 SFPQP23246 707 aaKnown RBP eCLIP17.67■□□□□ 0.42
COL11A2-201ENST00000341947 CCDC8Q9H0W5 538 aaPredicted RBP17.67■□□□□ 0.42
COL11A2-201ENST00000341947 BRPF3Q9ULD4 1205 aa17.67■□□□□ 0.42
COL11A2-201ENST00000341947 LRPPRCP42704 1394 aaKnown RBP17.67■□□□□ 0.42
COL11A2-201ENST00000341947 PLEKHH1Q9ULM0 1364 aa17.67■□□□□ 0.42
COL11A2-201ENST00000341947 SPDYE4A6NLX3 237 aa17.67■□□□□ 0.42
COL11A2-201ENST00000341947 IFIT3O14879 490 aaKnown RBP17.67■□□□□ 0.42
COL11A2-201ENST00000341947 UQCRHLA0A096LP55 91 aa17.66■□□□□ 0.42
COL11A2-201ENST00000341947 EXOC5O00471 708 aa17.66■□□□□ 0.42
COL11A2-201ENST00000341947 UQCRHP07919 91 aa17.66■□□□□ 0.42
COL11A2-201ENST00000341947 CCDC12Q8WUD4 166 aaPredicted RBP17.66■□□□□ 0.42
COL11A2-201ENST00000341947 C6orf229H3BNL8 230 aa17.66■□□□□ 0.42
COL11A2-201ENST00000341947 KIF5CO60282 957 aa17.66■□□□□ 0.42
COL11A2-201ENST00000341947 MCM4P33991 863 aa17.66■□□□□ 0.42
COL11A2-201ENST00000341947 DYDC1Q8WWB3 177 aa17.66■□□□□ 0.42
COL11A2-201ENST00000341947 UBXN4Q92575 508 aa17.66■□□□□ 0.42
COL11A2-201ENST00000341947 NGLY1Q96IV0 654 aa17.66■□□□□ 0.42
COL11A2-201ENST00000341947 INCENPQ9NQS7 918 aa17.66■□□□□ 0.42
COL11A2-201ENST00000341947 KIF2AO00139 706 aaPredicted RBP17.66■□□□□ 0.42
COL11A2-201ENST00000341947 CCDC178Q5BJE1 867 aa17.66■□□□□ 0.42
COL11A2-201ENST00000341947 CRACR2AQ9BSW2 395 aa17.66■□□□□ 0.42
COL11A2-201ENST00000341947 SYCE3A1L190 88 aa17.65■□□□□ 0.42
COL11A2-201ENST00000341947 TTF1Q15361 905 aaPredicted RBP17.65■□□□□ 0.42
COL11A2-201ENST00000341947 FEZ1Q99689 392 aa17.65■□□□□ 0.42
COL11A2-201ENST00000341947 LIG1P18858 919 aa17.65■□□□□ 0.42
COL11A2-201ENST00000341947 NME9Q86XW9 330 aa17.65■□□□□ 0.42
COL11A2-201ENST00000341947 CCDC82Q8N4S0 544 aa17.65■□□□□ 0.42
COL11A2-201ENST00000341947 DBF4Q9UBU7 674 aaPredicted RBP17.65■□□□□ 0.42
COL11A2-201ENST00000341947 LDHCP07864 332 aa17.64■□□□□ 0.42
COL11A2-201ENST00000341947 CASQ1P31415 396 aa17.64■□□□□ 0.42
COL11A2-201ENST00000341947 TEX13AQ9BXU3 409 aaPredicted RBP17.64■□□□□ 0.42
COL11A2-201ENST00000341947 FERMT2Q96AC1 680 aa17.64■□□□□ 0.41
COL11A2-201ENST00000341947 CDC5LQ99459 802 aaKnown RBP17.64■□□□□ 0.41
COL11A2-201ENST00000341947 TOP1P11387 765 aaKnown RBP17.64■□□□□ 0.41
COL11A2-201ENST00000341947 CCDC183Q5T5S1 534 aa17.64■□□□□ 0.41
COL11A2-201ENST00000341947 CCDC113Q9H0I3 377 aa17.64■□□□□ 0.41
COL11A2-201ENST00000341947 GUCY1B3Q02153 619 aa17.64■□□□□ 0.41
COL11A2-201ENST00000341947 MAP2K1Q02750 393 aaPredicted RBP17.64■□□□□ 0.41
COL11A2-201ENST00000341947 CTNNBL1Q8WYA6 563 aaPredicted RBP17.64■□□□□ 0.41
COL11A2-201ENST00000341947 CETN1Q12798 172 aa17.63■□□□□ 0.41
COL11A2-201ENST00000341947 GSTTP1A0A1W2PQM5 241 aa17.63■□□□□ 0.41
COL11A2-201ENST00000341947 LUZP1Q86V48 1076 aa17.63■□□□□ 0.41
COL11A2-201ENST00000341947 CABP5Q9NP86 173 aa17.63■□□□□ 0.41
COL11A2-201ENST00000341947 CALML4Q96GE6 196 aa17.63■□□□□ 0.41
COL11A2-201ENST00000341947 GPTP24298 496 aa17.63■□□□□ 0.41
COL11A2-201ENST00000341947 KIF5BP33176 963 aa17.63■□□□□ 0.41
COL11A2-201ENST00000341947 USO1O60763 962 aaKnown RBP17.63■□□□□ 0.41
COL11A2-201ENST00000341947 CNNM3Q8NE01 707 aa17.62■□□□□ 0.41
COL11A2-201ENST00000341947 MAP9Q49MG5 647 aa17.62■□□□□ 0.41
COL11A2-201ENST00000341947 DDX46Q7L014 1031 aaKnown RBP17.62■□□□□ 0.41
COL11A2-201ENST00000341947 DHX37Q8IY37 1157 aaKnown RBP17.62■□□□□ 0.41
COL11A2-201ENST00000341947 NUP88Q99567 741 aaPredicted RBP17.62■□□□□ 0.41
COL11A2-201ENST00000341947 CTAGE5O15320 804 aa17.62■□□□□ 0.41
COL11A2-201ENST00000341947 BAG3O95817 575 aa17.62■□□□□ 0.41
COL11A2-201ENST00000341947 AMPD3Q01432 767 aa17.62■□□□□ 0.41
COL11A2-201ENST00000341947 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.62■□□□□ 0.41
COL11A2-201ENST00000341947 MCM3P25205 808 aa17.62■□□□□ 0.41
COL11A2-201ENST00000341947 CC2D2AQ9P2K1 1620 aa17.62■□□□□ 0.41
COL11A2-201ENST00000341947 HLA-DOAP06340 250 aa17.62■□□□□ 0.41
COL11A2-201ENST00000341947 TDRD12Q587J7 1177 aaKnown RBP17.62■□□□□ 0.41
COL11A2-201ENST00000341947 HOOK3Q86VS8 718 aa17.62■□□□□ 0.41
COL11A2-201ENST00000341947 YEATS4O95619 227 aa17.61■□□□□ 0.41
COL11A2-201ENST00000341947 SPTY2D1Q68D10 685 aaPredicted RBP17.61■□□□□ 0.41
COL11A2-201ENST00000341947 STXBP4Q6ZWJ1 553 aa17.61■□□□□ 0.41
COL11A2-201ENST00000341947 ZBTB3Q9H5J0 574 aa17.61■□□□□ 0.41
COL11A2-201ENST00000341947 F6X3S4 739 aa17.61■□□□□ 0.41
COL11A2-201ENST00000341947 USP8P40818 1118 aa17.61■□□□□ 0.41
COL11A2-201ENST00000341947 PDE4BQ07343 736 aa17.61■□□□□ 0.41
COL11A2-201ENST00000341947 EVI5LQ96CN4 794 aa17.61■□□□□ 0.41
COL11A2-201ENST00000341947 DRC1Q96MC2 740 aa17.61■□□□□ 0.41
COL11A2-201ENST00000341947 GOPCQ9HD26 462 aa17.61■□□□□ 0.41
COL11A2-201ENST00000341947 STAMBPO95630 424 aa17.61■□□□□ 0.41
COL11A2-201ENST00000341947 AMOTL2Q9Y2J4 779 aa17.61■□□□□ 0.41
COL11A2-201ENST00000341947 SSH1Q8WYL5 1049 aa17.61■□□□□ 0.41
COL11A2-201ENST00000341947 KAT14Q9H8E8 782 aa17.61■□□□□ 0.41
COL11A2-201ENST00000341947 PTPRCP08575 1304 aa17.61■□□□□ 0.41
COL11A2-201ENST00000341947 CTNNA2P26232 953 aa17.61■□□□□ 0.41
COL11A2-201ENST00000341947 PTPN14Q15678 1187 aa17.61■□□□□ 0.41
COL11A2-201ENST00000341947 PPP1R42Q7Z4L9 355 aa17.61■□□□□ 0.41
COL11A2-201ENST00000341947 MPHOSPH6Q99547 160 aaKnown RBP17.61■□□□□ 0.41
COL11A2-201ENST00000341947 FOXO3O43524 673 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms