RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 RNMTO43148 476 aaKnown RBP9.12□□□□□ -0.95
HIPK1-201ENST00000340480 CEP85Q6P2H3 762 aa9.12□□□□□ -0.95
HIPK1-201ENST00000340480 MEIS3Q99687 375 aa9.12□□□□□ -0.95
HIPK1-201ENST00000340480 ADAMTS13Q76LX8 1427 aa9.12□□□□□ -0.95
HIPK1-201ENST00000340480 PI4KAP2A4QPH2 592 aa9.12□□□□□ -0.95
HIPK1-201ENST00000340480 EPB41L2O43491 1005 aaKnown RBP9.12□□□□□ -0.95
HIPK1-201ENST00000340480 AACSQ86V21 672 aa9.12□□□□□ -0.95
HIPK1-201ENST00000340480 PI4KAP1Q8N8J0 262 aa9.12□□□□□ -0.95
HIPK1-201ENST00000340480 CEP126Q9P2H0 1117 aa9.12□□□□□ -0.95
HIPK1-201ENST00000340480 A0A0U1RQG5 324 aaPredicted RBP9.12□□□□□ -0.95
HIPK1-201ENST00000340480 ANAPC15P60006 121 aa9.12□□□□□ -0.95
HIPK1-201ENST00000340480 NEUROD6Q96NK8 337 aa9.12□□□□□ -0.95
HIPK1-201ENST00000340480 ECHDC1Q9NTX5 307 aa9.12□□□□□ -0.95
HIPK1-201ENST00000340480 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.12□□□□□ -0.95
HIPK1-201ENST00000340480 TBC1D2BQ9UPU7 963 aa9.12□□□□□ -0.95
HIPK1-201ENST00000340480 DDX54Q8TDD1 881 aaKnown RBP9.11□□□□□ -0.95
HIPK1-201ENST00000340480 AKAP2Q9Y2D5 859 aa9.11□□□□□ -0.95
HIPK1-201ENST00000340480 MROH2AA6NES4 1674 aa9.11□□□□□ -0.95
HIPK1-201ENST00000340480 SNX21Q969T3 373 aa9.11□□□□□ -0.95
HIPK1-201ENST00000340480 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.11□□□□□ -0.951e-6■■□□□ 13.5
HIPK1-201ENST00000340480 CCDC57Q2TAC2 916 aa9.11□□□□□ -0.95
HIPK1-201ENST00000340480 DDX21Q9NR30 783 aaKnown RBP eCLIP9.11□□□□□ -0.95
HIPK1-201ENST00000340480 FOXD4L1Q9NU39 408 aa9.11□□□□□ -0.95
HIPK1-201ENST00000340480 CYP46A1Q9Y6A2 500 aa9.11□□□□□ -0.95
HIPK1-201ENST00000340480 MSNP26038 577 aaKnown RBP9.11□□□□□ -0.95
HIPK1-201ENST00000340480 PCDH11XQ9BZA7 1347 aa9.11□□□□□ -0.95
HIPK1-201ENST00000340480 PCDH11YQ9BZA8 1340 aa9.11□□□□□ -0.95
HIPK1-201ENST00000340480 MYL6BP14649 208 aa9.11□□□□□ -0.95
HIPK1-201ENST00000340480 SYNE3Q6ZMZ3 975 aa9.11□□□□□ -0.95
HIPK1-201ENST00000340480 ZCRB1Q8TBF4 217 aaKnown RBP9.11□□□□□ -0.95
HIPK1-201ENST00000340480 RBM42Q9BTD8 480 aaKnown RBP9.11□□□□□ -0.95
HIPK1-201ENST00000340480 TTC41PQ6P2S7 1318 aa9.11□□□□□ -0.95
HIPK1-201ENST00000340480 H3BQV1 296 aa9.11□□□□□ -0.95
HIPK1-201ENST00000340480 NCAPD2Q15021 1401 aa9.11□□□□□ -0.95
HIPK1-201ENST00000340480 IFFO2Q5TF58 517 aa9.11□□□□□ -0.95
HIPK1-201ENST00000340480 TBC1D9Q6ZT07 1266 aa9.11□□□□□ -0.95
HIPK1-201ENST00000340480 ERBB4Q15303 1308 aa9.1□□□□□ -0.95
HIPK1-201ENST00000340480 WDR33Q9C0J8 1336 aaKnown RBP9.1□□□□□ -0.95
HIPK1-201ENST00000340480 NOL8Q76FK4 1167 aaKnown RBP9.1□□□□□ -0.95
HIPK1-201ENST00000340480 CDCA7Q9BWT1 371 aaPredicted RBP9.1□□□□□ -0.95
HIPK1-201ENST00000340480 GZF1Q9H116 711 aaPredicted RBP9.1□□□□□ -0.95
HIPK1-201ENST00000340480 PPP1R42Q7Z4L9 355 aa9.1□□□□□ -0.95
HIPK1-201ENST00000340480 RALYLQ86SE5 291 aaKnown RBP9.1□□□□□ -0.95
HIPK1-201ENST00000340480 AKAP17AQ02040 695 aaKnown RBP9.1□□□□□ -0.95
HIPK1-201ENST00000340480 CTNNA3Q9UI47 895 aa9.1□□□□□ -0.95
HIPK1-201ENST00000340480 MAP3K2Q9Y2U5 619 aa9.1□□□□□ -0.95
HIPK1-201ENST00000340480 MRE11P49959 708 aa9.1□□□□□ -0.95
HIPK1-201ENST00000340480 RHPN1Q8TCX5 695 aa9.09□□□□□ -0.95
HIPK1-201ENST00000340480 EVI5LQ96CN4 794 aa9.09□□□□□ -0.95
HIPK1-201ENST00000340480 CHPF2Q9P2E5 772 aa9.09□□□□□ -0.95
HIPK1-201ENST00000340480 PDE1AP54750 535 aa9.09□□□□□ -0.95
HIPK1-201ENST00000340480 RBM33Q96EV2 1170 aaKnown RBP9.09□□□□□ -0.95
HIPK1-201ENST00000340480 IL1RAPL2Q9NP60 686 aa9.09□□□□□ -0.95
HIPK1-201ENST00000340480 IL2RBP14784 551 aa9.09□□□□□ -0.95
HIPK1-201ENST00000340480 ANKRD13DQ6ZTN6 518 aa9.09□□□□□ -0.95
HIPK1-201ENST00000340480 DHX16O60231 1041 aaKnown RBP9.09□□□□□ -0.95
HIPK1-201ENST00000340480 ORAI2Q96SN7 254 aa9.09□□□□□ -0.95
HIPK1-201ENST00000340480 GRM8O00222 908 aa9.08□□□□□ -0.96
HIPK1-201ENST00000340480 TPM2P07951 284 aa9.08□□□□□ -0.96
HIPK1-201ENST00000340480 TBC1D2Q9BYX2 928 aa9.08□□□□□ -0.96
HIPK1-201ENST00000340480 ARHGEF25Q86VW2 580 aa9.08□□□□□ -0.96
HIPK1-201ENST00000340480 MYD88Q99836 296 aa9.08□□□□□ -0.96
HIPK1-201ENST00000340480 TNNQ9UQP3 1299 aa9.08□□□□□ -0.96
HIPK1-201ENST00000340480 ZNF652Q9Y2D9 606 aa9.08□□□□□ -0.96
HIPK1-201ENST00000340480 CPS1P31327 1500 aa9.08□□□□□ -0.96
HIPK1-201ENST00000340480 EXOC5O00471 708 aa9.08□□□□□ -0.96
HIPK1-201ENST00000340480 LETM1O95202 739 aaPredicted RBP9.08□□□□□ -0.96
HIPK1-201ENST00000340480 MCM4P33991 863 aa9.08□□□□□ -0.96
HIPK1-201ENST00000340480 SH2B1Q9NRF2 756 aaPredicted RBP9.08□□□□□ -0.96
HIPK1-201ENST00000340480 CPLX1O14810 134 aa9.08□□□□□ -0.96
HIPK1-201ENST00000340480 GNL3LQ9NVN8 582 aaKnown RBP9.08□□□□□ -0.96
HIPK1-201ENST00000340480 IQSEC2Q5JU85 1478 aa9.08□□□□□ -0.96
HIPK1-201ENST00000340480 TRAK2O60296 914 aa9.08□□□□□ -0.96
HIPK1-201ENST00000340480 CWC25Q9NXE8 425 aaPredicted RBP9.08□□□□□ -0.96
HIPK1-201ENST00000340480 OVOS2A0A0J9YW53 1432 aa9.08□□□□□ -0.96
HIPK1-201ENST00000340480 OVOS2Q6IE36 1432 aa9.08□□□□□ -0.96
HIPK1-201ENST00000340480 LRRC59Q96AG4 307 aaKnown RBP9.08□□□□□ -0.96
HIPK1-201ENST00000340480 TMEM94Q12767 1356 aa9.08□□□□□ -0.96
HIPK1-201ENST00000340480 TPM3P06753 285 aa9.07□□□□□ -0.96
HIPK1-201ENST00000340480 NBPF6Q5VWK0 638 aa9.07□□□□□ -0.96
HIPK1-201ENST00000340480 NBPF4Q96M43 638 aa9.07□□□□□ -0.96
HIPK1-201ENST00000340480 ARHGEF28Q8N1W1 1705 aaKnown RBP9.07□□□□□ -0.96
HIPK1-201ENST00000340480 LRRC7Q96NW7 1537 aa9.07□□□□□ -0.96
HIPK1-201ENST00000340480 BLOC1S2Q6QNY1 142 aa9.07□□□□□ -0.96
HIPK1-201ENST00000340480 RAD50Q92878 1312 aa9.07□□□□□ -0.96
HIPK1-201ENST00000340480 A0A087WZG4 1122 aa9.07□□□□□ -0.96
HIPK1-201ENST00000340480 RBM25P49756 843 aaKnown RBP9.07□□□□□ -0.96
HIPK1-201ENST00000340480 CCDC43Q96MW1 224 aaKnown RBP9.07□□□□□ -0.96
HIPK1-201ENST00000340480 WASHC4Q2M389 1173 aa9.06□□□□□ -0.96
HIPK1-201ENST00000340480 TTC39AQ5SRH9 613 aa9.06□□□□□ -0.96
HIPK1-201ENST00000340480 CCDC47Q96A33 483 aaKnown RBP9.06□□□□□ -0.96
HIPK1-201ENST00000340480 CNNM1Q9NRU3 951 aa9.06□□□□□ -0.96
HIPK1-201ENST00000340480 EIF4A1P60842 406 aaKnown RBP9.06□□□□□ -0.96
HIPK1-201ENST00000340480 HMG20BQ9P0W2 317 aa9.06□□□□□ -0.96
HIPK1-201ENST00000340480 HMGB1P09429 215 aaKnown RBP9.06□□□□□ -0.96
HIPK1-201ENST00000340480 PLEKHM2Q8IWE5 1019 aa9.06□□□□□ -0.96
HIPK1-201ENST00000340480 SF3A1Q15459 793 aaKnown RBP9.06□□□□□ -0.96
HIPK1-201ENST00000340480 VPS37DQ86XT2 251 aa9.06□□□□□ -0.96
HIPK1-201ENST00000340480 DNAJC2Q99543 621 aaKnown RBP9.06□□□□□ -0.96
HIPK1-201ENST00000340480 SMARCA5O60264 1052 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms