RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 MBIPQ9NS73 344 aa15.39■□□□□ 0.05
LIN54-201ENST00000340417 CDC45O75419 566 aa15.39■□□□□ 0.05
LIN54-201ENST00000340417 H0YIN7 160 aa15.39■□□□□ 0.05
LIN54-201ENST00000340417 ZC3H12CQ9C0D7 883 aaKnown RBP15.39■□□□□ 0.05
LIN54-201ENST00000340417 ASXL1Q8IXJ9 1541 aa15.39■□□□□ 0.05
LIN54-201ENST00000340417 FANCIQ9NVI1 1328 aa15.38■□□□□ 0.05
LIN54-201ENST00000340417 MAP3K12Q12852 859 aa15.38■□□□□ 0.05
LIN54-201ENST00000340417 CCDC47Q96A33 483 aaKnown RBP15.38■□□□□ 0.05
LIN54-201ENST00000340417 RBM26Q5T8P6 1007 aaKnown RBP15.38■□□□□ 0.05
LIN54-201ENST00000340417 BRINP3Q76B58 766 aa15.38■□□□□ 0.05
LIN54-201ENST00000340417 GJA3Q9Y6H8 435 aa15.38■□□□□ 0.05
LIN54-201ENST00000340417 LDHCP07864 332 aa15.38■□□□□ 0.05
LIN54-201ENST00000340417 ALDH1L2Q3SY69 923 aa15.38■□□□□ 0.05
LIN54-201ENST00000340417 TMEM132AQ24JP5 1023 aa15.38■□□□□ 0.05
LIN54-201ENST00000340417 EYA3Q99504 573 aa15.38■□□□□ 0.05
LIN54-201ENST00000340417 ZFYVE9O95405 1425 aa15.38■□□□□ 0.05
LIN54-201ENST00000340417 MSL1Q68DK7 614 aa15.37■□□□□ 0.05
LIN54-201ENST00000340417 SEPT12Q8IYM1 358 aa15.37■□□□□ 0.05
LIN54-201ENST00000340417 MVPQ14764 893 aaKnown RBP15.37■□□□□ 0.05
LIN54-201ENST00000340417 RPAP2Q8IXW5 612 aaPredicted RBP15.37■□□□□ 0.05
LIN54-201ENST00000340417 SLFN5Q08AF3 891 aa15.36■□□□□ 0.05
LIN54-201ENST00000340417 SPTY2D1Q68D10 685 aaPredicted RBP15.36■□□□□ 0.05
LIN54-201ENST00000340417 MKNK2Q9HBH9 465 aa15.36■□□□□ 0.05
LIN54-201ENST00000340417 TPD52L1Q16890 204 aaPredicted RBP15.36■□□□□ 0.05
LIN54-201ENST00000340417 SYAP1Q96A49 352 aaPredicted RBP15.36■□□□□ 0.05
LIN54-201ENST00000340417 KIAA0232Q92628 1395 aa15.36■□□□□ 0.05
LIN54-201ENST00000340417 NSFL1CQ9UNZ2 370 aaKnown RBP15.36■□□□□ 0.05
LIN54-201ENST00000340417 KIF1BPQ96EK5 621 aa15.36■□□□□ 0.05
LIN54-201ENST00000340417 PTPRCP08575 1304 aa15.36■□□□□ 0.05
LIN54-201ENST00000340417 CCDC69A6NI79 296 aa15.35■□□□□ 0.05
LIN54-201ENST00000340417 R3HCC1Q9Y3T6 440 aaKnown RBP15.35■□□□□ 0.05
LIN54-201ENST00000340417 F8W031 263 aaPredicted RBP15.35■□□□□ 0.05
LIN54-201ENST00000340417 TMEM57Q8N5G2 664 aa15.35■□□□□ 0.05
LIN54-201ENST00000340417 UBAC1Q9BSL1 405 aa15.35■□□□□ 0.05
LIN54-201ENST00000340417 ATP6V1DQ9Y5K8 247 aa15.35■□□□□ 0.05
LIN54-201ENST00000340417 RIMBP2O15034 1052 aa15.35■□□□□ 0.05
LIN54-201ENST00000340417 MYCNP04198 464 aaPredicted RBP15.35■□□□□ 0.05
LIN54-201ENST00000340417 FEZ1Q99689 392 aa15.35■□□□□ 0.05
LIN54-201ENST00000340417 LRRFIP2Q9Y608 721 aaKnown RBP15.35■□□□□ 0.05
LIN54-201ENST00000340417 PES1O00541 588 aaKnown RBP15.35■□□□□ 0.05
LIN54-201ENST00000340417 HSPA1LP34931 641 aa15.35■□□□□ 0.05
LIN54-201ENST00000340417 SSH1Q8WYL5 1049 aa15.35■□□□□ 0.05
LIN54-201ENST00000340417 FAM182BQ5T319 152 aa15.34■□□□□ 0.05
LIN54-201ENST00000340417 WWC2Q6AWC2 1192 aa15.34■□□□□ 0.05
LIN54-201ENST00000340417 ZNF804AQ7Z570 1209 aa15.34■□□□□ 0.05
LIN54-201ENST00000340417 NUP133Q8WUM0 1156 aa15.34■□□□□ 0.05
LIN54-201ENST00000340417 EXOC6BQ9Y2D4 811 aa15.34■□□□□ 0.05
LIN54-201ENST00000340417 ABCC3O15438 1527 aa15.34■□□□□ 0.05
LIN54-201ENST00000340417 BCS1LQ9Y276 419 aa15.34■□□□□ 0.05
LIN54-201ENST00000340417 BAG3O95817 575 aa15.34■□□□□ 0.05
LIN54-201ENST00000340417 PTMSP20962 102 aa15.34■□□□□ 0.05
LIN54-201ENST00000340417 NUTM1Q86Y26 1132 aa15.34■□□□□ 0.05
LIN54-201ENST00000340417 CTNNA3Q9UI47 895 aa15.34■□□□□ 0.05
LIN54-201ENST00000340417 SOGA3Q5TF21 947 aa15.34■□□□□ 0.05
LIN54-201ENST00000340417 MINDY4BA8MYZ0 360 aa15.33■□□□□ 0.05
LIN54-201ENST00000340417 RAB11FIP3O75154 756 aa15.33■□□□□ 0.05
LIN54-201ENST00000340417 FOXD4L6Q3SYB3 417 aaPredicted RBP15.33■□□□□ 0.05
LIN54-201ENST00000340417 FOXD4L3Q6VB84 417 aaPredicted RBP15.33■□□□□ 0.05
LIN54-201ENST00000340417 ARAP3Q8WWN8 1544 aa15.33■□□□□ 0.04
LIN54-201ENST00000340417 RBM6P78332 1123 aaKnown RBP15.33■□□□□ 0.04
LIN54-201ENST00000340417 ROBO2Q9HCK4 1378 aa15.33■□□□□ 0.04
LIN54-201ENST00000340417 EIF6P56537 245 aaKnown RBP15.33■□□□□ 0.04
LIN54-201ENST00000340417 DNTTIP2Q5QJE6 756 aaKnown RBP15.32■□□□□ 0.04
LIN54-201ENST00000340417 IRS4O14654 1257 aaPredicted RBP15.32■□□□□ 0.04
LIN54-201ENST00000340417 HLA-DOAP06340 250 aa15.32■□□□□ 0.04
LIN54-201ENST00000340417 CCDC184Q52MB2 194 aa15.32■□□□□ 0.04
LIN54-201ENST00000340417 SMC3Q9UQE7 1217 aa15.32■□□□□ 0.04
LIN54-201ENST00000340417 GSTO1P78417 241 aa15.32■□□□□ 0.04
LIN54-201ENST00000340417 TESK2Q96S53 571 aa15.32■□□□□ 0.04
LIN54-201ENST00000340417 CABP5Q9NP86 173 aa15.32■□□□□ 0.04
LIN54-201ENST00000340417 VEZTQ9HBM0 779 aa15.31■□□□□ 0.04
LIN54-201ENST00000340417 NOP58Q9Y2X3 529 aaKnown RBP15.31■□□□□ 0.04
LIN54-201ENST00000340417 ZNF444Q8N0Y2 327 aaPredicted RBP15.31■□□□□ 0.04
LIN54-201ENST00000340417 ZNF790Q6PG37 636 aa15.31■□□□□ 0.04
LIN54-201ENST00000340417 CARD14Q9BXL6 1004 aa15.31■□□□□ 0.04
LIN54-201ENST00000340417 CCDC8Q9H0W5 538 aaPredicted RBP15.31■□□□□ 0.04
LIN54-201ENST00000340417 SLC52A2Q9HAB3 445 aa15.31■□□□□ 0.04
LIN54-201ENST00000340417 CARD10Q9BWT7 1032 aa15.3■□□□□ 0.04
LIN54-201ENST00000340417 BOLA2Q9H3K6 86 aa15.3■□□□□ 0.04
LIN54-201ENST00000340417 VPS37CA5D8V6 355 aaPredicted RBP15.3■□□□□ 0.04
LIN54-201ENST00000340417 KSR2Q6VAB6 950 aa15.3■□□□□ 0.04
LIN54-201ENST00000340417 PARP10Q53GL7 1025 aa15.3■□□□□ 0.04
LIN54-201ENST00000340417 BEGAINQ9BUH8 593 aa15.3■□□□□ 0.04
LIN54-201ENST00000340417 MAP3K4Q9Y6R4 1608 aa15.29■□□□□ 0.04
LIN54-201ENST00000340417 ZGPATQ8N5A5 531 aaKnown RBP15.29■□□□□ 0.04
LIN54-201ENST00000340417 JCADQ9P266 1359 aa15.29■□□□□ 0.04
LIN54-201ENST00000340417 TPM2P07951 284 aa15.29■□□□□ 0.04
LIN54-201ENST00000340417 ARHGAP27Q6ZUM4 889 aa15.29■□□□□ 0.04
LIN54-201ENST00000340417 ERVV-2B6SEH9 535 aa15.29■□□□□ 0.04
LIN54-201ENST00000340417 PTPRMP28827 1452 aa15.29■□□□□ 0.04
LIN54-201ENST00000340417 ABCA9Q8IUA7 1624 aa15.29■□□□□ 0.04
LIN54-201ENST00000340417 NAPBQ9H115 298 aa15.29■□□□□ 0.04
LIN54-201ENST00000340417 PDZRN3Q9UPQ7 1066 aa15.29■□□□□ 0.04
LIN54-201ENST00000340417 KRI1Q8N9T8 703 aaKnown RBP15.29■□□□□ 0.04
LIN54-201ENST00000340417 IL16Q14005 1332 aa15.28■□□□□ 0.04
LIN54-201ENST00000340417 LARGE2Q8N3Y3 721 aa15.28■□□□□ 0.04
LIN54-201ENST00000340417 ANKRD2Q9GZV1 360 aa15.28■□□□□ 0.04
LIN54-201ENST00000340417 ZNF408Q9H9D4 720 aa15.28■□□□□ 0.04
LIN54-201ENST00000340417 DNAJC10Q8IXB1 793 aa15.28■□□□□ 0.04
LIN54-201ENST00000340417 CHMP4BP1P59074 171 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms