RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 CICQ96RK0 1608 aaPredicted RBP10□□□□□ -0.81
TMC1-202ENST00000340019 KCNQ2O43526 872 aa10□□□□□ -0.81
TMC1-202ENST00000340019 G2E3Q7L622 706 aa10□□□□□ -0.81
TMC1-202ENST00000340019 DZIP1LQ8IYY4 767 aaKnown RBP10□□□□□ -0.81
TMC1-202ENST00000340019 VSIG10Q8N0Z9 540 aa10□□□□□ -0.81
TMC1-202ENST00000340019 CHPF2Q9P2E5 772 aa10□□□□□ -0.81
TMC1-202ENST00000340019 USP16Q9Y5T5 823 aa10□□□□□ -0.81
TMC1-202ENST00000340019 BTAF1O14981 1849 aa9.99□□□□□ -0.81
TMC1-202ENST00000340019 MS4A1P11836 297 aa9.99□□□□□ -0.81
TMC1-202ENST00000340019 PDIA6Q15084 440 aa9.99□□□□□ -0.81
TMC1-202ENST00000340019 DBF4Q9UBU7 674 aaPredicted RBP9.99□□□□□ -0.81
TMC1-202ENST00000340019 TJP1Q07157 1748 aa9.99□□□□□ -0.81
TMC1-202ENST00000340019 PTCD1O75127 700 aaKnown RBP9.99□□□□□ -0.81
TMC1-202ENST00000340019 CLUAP1Q96AJ1 413 aa9.99□□□□□ -0.81
TMC1-202ENST00000340019 ABCC4O15439 1325 aa9.99□□□□□ -0.81
TMC1-202ENST00000340019 ZNF831Q5JPB2 1677 aa9.99□□□□□ -0.81
TMC1-202ENST00000340019 API5Q9BZZ5 524 aaKnown RBP9.98□□□□□ -0.81
TMC1-202ENST00000340019 N4BP2Q86UW6 1770 aaPredicted RBP9.98□□□□□ -0.81
TMC1-202ENST00000340019 FLIIQ13045 1269 aa9.98□□□□□ -0.81
TMC1-202ENST00000340019 FAM182BQ5T319 152 aa9.98□□□□□ -0.81
TMC1-202ENST00000340019 SLC4A9Q96Q91 983 aa9.98□□□□□ -0.81
TMC1-202ENST00000340019 RXRBP28702 533 aa9.98□□□□□ -0.81
TMC1-202ENST00000340019 PROSER3Q2NL68 480 aa9.98□□□□□ -0.81
TMC1-202ENST00000340019 LRP10Q7Z4F1 713 aa9.98□□□□□ -0.81
TMC1-202ENST00000340019 FTSJ3Q8IY81 847 aaKnown RBP9.98□□□□□ -0.81
TMC1-202ENST00000340019 DDX21Q9NR30 783 aaKnown RBP eCLIP9.98□□□□□ -0.81
TMC1-202ENST00000340019 COG6Q9Y2V7 657 aa9.98□□□□□ -0.81
TMC1-202ENST00000340019 MVPQ14764 893 aaKnown RBP9.97□□□□□ -0.81
TMC1-202ENST00000340019 KRT27Q7Z3Y8 459 aa9.97□□□□□ -0.81
TMC1-202ENST00000340019 PHAXQ9H814 394 aaKnown RBP9.97□□□□□ -0.81
TMC1-202ENST00000340019 POTEAQ6S8J7 498 aa9.97□□□□□ -0.81
TMC1-202ENST00000340019 PTF1AQ7RTS3 328 aa9.97□□□□□ -0.81
TMC1-202ENST00000340019 TMEM57Q8N5G2 664 aa9.97□□□□□ -0.81
TMC1-202ENST00000340019 ERBB4Q15303 1308 aa9.97□□□□□ -0.81
TMC1-202ENST00000340019 ANXA1P04083 346 aa9.96□□□□□ -0.81
TMC1-202ENST00000340019 TEX13AQ9BXU3 409 aaPredicted RBP9.96□□□□□ -0.81
TMC1-202ENST00000340019 HYPKQ9NX55 129 aa9.96□□□□□ -0.81
TMC1-202ENST00000340019 PALLDQ8WX93 1383 aa9.96□□□□□ -0.81
TMC1-202ENST00000340019 PPP4R2Q9NY27 417 aa9.96□□□□□ -0.82
TMC1-202ENST00000340019 LY75O60449 1722 aa9.96□□□□□ -0.82
TMC1-202ENST00000340019 COL5A3P25940 1745 aaPredicted RBP9.96□□□□□ -0.82
TMC1-202ENST00000340019 SMARCC1Q92922 1105 aaPredicted RBP9.96□□□□□ -0.82
TMC1-202ENST00000340019 RBM42Q9BTD8 480 aaKnown RBP9.96□□□□□ -0.82
TMC1-202ENST00000340019 PXDNLA1KZ92 1463 aa9.95□□□□□ -0.82
TMC1-202ENST00000340019 RREB1Q92766 1687 aa9.95□□□□□ -0.82
TMC1-202ENST00000340019 NBPF26B4DH59 902 aa9.95□□□□□ -0.82
TMC1-202ENST00000340019 FKBP5Q13451 457 aaPredicted RBP9.95□□□□□ -0.82
TMC1-202ENST00000340019 NBPF14Q5TI25 921 aa9.95□□□□□ -0.82
TMC1-202ENST00000340019 INTS3Q68E01 1043 aaKnown RBP9.95□□□□□ -0.82
TMC1-202ENST00000340019 NBPF10Q6P3W6 841 aaKnown RBP9.95□□□□□ -0.82
TMC1-202ENST00000340019 FAM196AQ6ZSG2 479 aa9.95□□□□□ -0.82
TMC1-202ENST00000340019 DNAJC10Q8IXB1 793 aa9.95□□□□□ -0.82
TMC1-202ENST00000340019 NBPF15Q8N660 670 aa9.95□□□□□ -0.82
TMC1-202ENST00000340019 LOC102724428A0A0B4J2F2 783 aa9.94□□□□□ -0.82
TMC1-202ENST00000340019 SIK1P57059 783 aa9.94□□□□□ -0.82
TMC1-202ENST00000340019 BCL11BQ9C0K0 894 aaPredicted RBP9.94□□□□□ -0.82
TMC1-202ENST00000340019 DDX19BQ9UMR2 479 aa9.94□□□□□ -0.82
TMC1-202ENST00000340019 F6X3S4 739 aa9.94□□□□□ -0.82
TMC1-202ENST00000340019 ADCY9O60503 1353 aa9.94□□□□□ -0.82
TMC1-202ENST00000340019 A1BGP04217 495 aa9.94□□□□□ -0.82
TMC1-202ENST00000340019 CYP19A1P11511 503 aaPredicted RBP9.94□□□□□ -0.82
TMC1-202ENST00000340019 ITPRIPQ8IWB1 547 aa9.94□□□□□ -0.82
TMC1-202ENST00000340019 STARD3NLO95772 234 aa9.93□□□□□ -0.82
TMC1-202ENST00000340019 MYL6BP14649 208 aa9.93□□□□□ -0.82
TMC1-202ENST00000340019 PIP4K2AP48426 406 aaPredicted RBP9.93□□□□□ -0.82
TMC1-202ENST00000340019 AAMPQ13685 434 aa9.93□□□□□ -0.82
TMC1-202ENST00000340019 MYH14Q7Z406 1995 aaKnown RBP9.93□□□□□ -0.82
TMC1-202ENST00000340019 PI4KAP2A4QPH2 592 aa9.93□□□□□ -0.82
TMC1-202ENST00000340019 ZBTB7BO15156 539 aaPredicted RBP9.93□□□□□ -0.82
TMC1-202ENST00000340019 ATP6V1AP38606 617 aa9.93□□□□□ -0.82
TMC1-202ENST00000340019 ITPK1Q13572 414 aa9.93□□□□□ -0.82
TMC1-202ENST00000340019 PI4KAP1Q8N8J0 262 aa9.93□□□□□ -0.82
TMC1-202ENST00000340019 ARFGEF2Q9Y6D5 1785 aa9.92□□□□□ -0.82
TMC1-202ENST00000340019 NUP188Q5SRE5 1749 aa9.92□□□□□ -0.82
TMC1-202ENST00000340019 KSR2Q6VAB6 950 aa9.92□□□□□ -0.82
TMC1-202ENST00000340019 COPS6Q7L5N1 327 aa9.92□□□□□ -0.82
TMC1-202ENST00000340019 ILDR1Q86SU0 546 aaPredicted RBP9.92□□□□□ -0.82
TMC1-202ENST00000340019 XAGE3Q8WTP9 111 aa9.92□□□□□ -0.82
TMC1-202ENST00000340019 ZBTB40Q9NUA8 1239 aa9.92□□□□□ -0.82
TMC1-202ENST00000340019 ATP10DQ9P241 1426 aa9.92□□□□□ -0.82
TMC1-202ENST00000340019 TAF1LQ8IZX4 1826 aa9.92□□□□□ -0.82
TMC1-202ENST00000340019 CCT4P50991 539 aaKnown RBP9.92□□□□□ -0.82
TMC1-202ENST00000340019 DNAAF4Q8WXU2 420 aa9.91□□□□□ -0.82
TMC1-202ENST00000340019 B4GALNT3Q6L9W6 998 aa9.91□□□□□ -0.82
TMC1-202ENST00000340019 SLC4A10Q6U841 1118 aa9.91□□□□□ -0.82
TMC1-202ENST00000340019 MAP3K2Q9Y2U5 619 aa9.91□□□□□ -0.82
TMC1-202ENST00000340019 DDX58O95786 925 aaKnown RBP9.91□□□□□ -0.82
TMC1-202ENST00000340019 AIMP1Q12904 312 aaKnown RBP9.91□□□□□ -0.82
TMC1-202ENST00000340019 BEND3Q5T5X7 828 aa9.91□□□□□ -0.82
TMC1-202ENST00000340019 INTS5Q6P9B9 1019 aaKnown RBP9.91□□□□□ -0.82
TMC1-202ENST00000340019 ZBTB1Q9Y2K1 713 aa9.9□□□□□ -0.82
TMC1-202ENST00000340019 TRIM37O94972 964 aa9.9□□□□□ -0.83
TMC1-202ENST00000340019 ANKRD13DQ6ZTN6 518 aa9.9□□□□□ -0.83
TMC1-202ENST00000340019 CCDC136Q96JN2 1154 aa9.9□□□□□ -0.83
TMC1-202ENST00000340019 CHMP4BQ9H444 224 aaKnown RBP9.9□□□□□ -0.83
TMC1-202ENST00000340019 IBTKQ9P2D0 1353 aaPredicted RBP9.9□□□□□ -0.83
TMC1-202ENST00000340019 IL6STP40189 918 aaPredicted RBP9.89□□□□□ -0.83
TMC1-202ENST00000340019 CRKLP46109 303 aaKnown RBP9.89□□□□□ -0.83
TMC1-202ENST00000340019 TTLL7Q6ZT98 887 aa9.89□□□□□ -0.83
TMC1-202ENST00000340019 LINC00116Q8NCU8 138 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms