RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 SRCIN1Q9C0H9 1055 aa9.23□□□□□ -0.93
SRFBP1-201ENST00000339397 JARID2Q92833 1246 aaPredicted RBP9.22□□□□□ -0.93
SRFBP1-201ENST00000339397 SOS1Q07889 1333 aaPredicted RBP9.22□□□□□ -0.93
SRFBP1-201ENST00000339397 PTCD1O75127 700 aaKnown RBP9.22□□□□□ -0.93
SRFBP1-201ENST00000339397 UBTFL1P0CB47 393 aaPredicted RBP9.22□□□□□ -0.93
SRFBP1-201ENST00000339397 GNAI3P08754 354 aa9.22□□□□□ -0.93
SRFBP1-201ENST00000339397 IL2RBP14784 551 aa9.22□□□□□ -0.93
SRFBP1-201ENST00000339397 ATP8B2P98198 1209 aa9.22□□□□□ -0.93
SRFBP1-201ENST00000339397 ADAMTS2O95450 1211 aa9.21□□□□□ -0.93
SRFBP1-201ENST00000339397 PIP4K2BP78356 416 aa9.21□□□□□ -0.93
SRFBP1-201ENST00000339397 COPS6Q7L5N1 327 aa9.21□□□□□ -0.93
SRFBP1-201ENST00000339397 PPP1R42Q7Z4L9 355 aa9.21□□□□□ -0.93
SRFBP1-201ENST00000339397 TBC1D32Q96NH3 1257 aa9.21□□□□□ -0.93
SRFBP1-201ENST00000339397 CARD10Q9BWT7 1032 aa9.21□□□□□ -0.93
SRFBP1-201ENST00000339397 OVOS2A0A0G2JMS6 1433 aa9.21□□□□□ -0.94
SRFBP1-201ENST00000339397 BMP2KLQ5H9B9 411 aa9.21□□□□□ -0.94
SRFBP1-201ENST00000339397 XAGE3Q8WTP9 111 aa9.21□□□□□ -0.94
SRFBP1-201ENST00000339397 DDX21Q9NR30 783 aaKnown RBP eCLIP9.21□□□□□ -0.94
SRFBP1-201ENST00000339397 PLCB2Q00722 1185 aa9.2□□□□□ -0.94
SRFBP1-201ENST00000339397 KSR2Q6VAB6 950 aa9.2□□□□□ -0.94
SRFBP1-201ENST00000339397 TBC1D9Q6ZT07 1266 aa9.2□□□□□ -0.94
SRFBP1-201ENST00000339397 LRP10Q7Z4F1 713 aa9.2□□□□□ -0.94
SRFBP1-201ENST00000339397 TTC5Q8N0Z6 440 aa9.2□□□□□ -0.94
SRFBP1-201ENST00000339397 IL1RAPL2Q9NP60 686 aa9.2□□□□□ -0.94
SRFBP1-201ENST00000339397 KAT6BQ8WYB5 2073 aa9.2□□□□□ -0.94
SRFBP1-201ENST00000339397 SIPA1L3O60292 1781 aaPredicted RBP9.2□□□□□ -0.94
SRFBP1-201ENST00000339397 IGKV5-2P06315 115 aa9.19□□□□□ -0.94
SRFBP1-201ENST00000339397 C22orf23Q9BZE7 217 aa9.19□□□□□ -0.94
SRFBP1-201ENST00000339397 SCN11AQ9UI33 1791 aa9.19□□□□□ -0.94
SRFBP1-201ENST00000339397 CACNA1FO60840 1977 aa9.19□□□□□ -0.94
SRFBP1-201ENST00000339397 SRGAP3O43295 1099 aa9.19□□□□□ -0.94
SRFBP1-201ENST00000339397 HMMRO75330 724 aa9.19□□□□□ -0.94
SRFBP1-201ENST00000339397 A1BGP04217 495 aa9.19□□□□□ -0.94
SRFBP1-201ENST00000339397 SNRPA1P09661 255 aaKnown RBP9.19□□□□□ -0.94
SRFBP1-201ENST00000339397 KAZALD1Q96I82 304 aa9.19□□□□□ -0.94
SRFBP1-201ENST00000339397 HYPKQ9NX55 129 aa9.19□□□□□ -0.94
SRFBP1-201ENST00000339397 ADAMTS7Q9UKP4 1686 aa9.19□□□□□ -0.94
SRFBP1-201ENST00000339397 NBPF26B4DH59 902 aa9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 NBPF14Q5TI25 921 aa9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 NBPF10Q6P3W6 841 aaKnown RBP9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 RIC3Q7Z5B4 369 aa9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 NBPF15Q8N660 670 aa9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 FMNL2Q96PY5 1086 aa9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 C9orf78Q9NZ63 289 aaPredicted RBP9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 PA2G4Q9UQ80 394 aaKnown RBP9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 PCDH11XQ9BZA7 1347 aa9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 PCDH11YQ9BZA8 1340 aa9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 NUTM2BA6NNL0 878 aaPredicted RBP9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 NUTM2EB1AL46 878 aaPredicted RBP9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 ATP5J2-PTCD1G3V325 749 aa9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 SURF6O75683 361 aaKnown RBP9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 SDSP20132 328 aa9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 TTC22Q5TAA0 569 aa9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 NUTM2AQ8IVF1 878 aaPredicted RBP9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 SPRYD3Q8NCJ5 442 aa9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 DDRGK1Q96HY6 314 aa9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 ASAP1Q9ULH1 1129 aa9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 PDE1AP54750 535 aa9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 SSH3Q8TE77 659 aa9.18□□□□□ -0.94
SRFBP1-201ENST00000339397 HSP90AB1P08238 724 aaKnown RBP9.17□□□□□ -0.94
SRFBP1-201ENST00000339397 RTL5Q5HYW3 569 aaPredicted RBP9.17□□□□□ -0.94
SRFBP1-201ENST00000339397 NUTM1Q86Y26 1132 aa9.17□□□□□ -0.94
SRFBP1-201ENST00000339397 MYD88Q99836 296 aa9.17□□□□□ -0.94
SRFBP1-201ENST00000339397 LRRCC1Q9C099 1032 aa9.17□□□□□ -0.94
SRFBP1-201ENST00000339397 UPF2Q9HAU5 1272 aaKnown RBP9.17□□□□□ -0.94
SRFBP1-201ENST00000339397 NHSL1Q5SYE7 1610 aa9.17□□□□□ -0.94
SRFBP1-201ENST00000339397 C5P01031 1676 aa9.17□□□□□ -0.94
SRFBP1-201ENST00000339397 ROBO1Q9Y6N7 1651 aa9.17□□□□□ -0.94
SRFBP1-201ENST00000339397 TTLL7Q6ZT98 887 aa9.17□□□□□ -0.94
SRFBP1-201ENST00000339397 ANKRD13DQ6ZTN6 518 aa9.17□□□□□ -0.94
SRFBP1-201ENST00000339397 KLHDC4Q8TBB5 520 aa9.17□□□□□ -0.94
SRFBP1-201ENST00000339397 SUCLG2Q96I99 432 aa9.17□□□□□ -0.94
SRFBP1-201ENST00000339397 ABCA3Q99758 1704 aa9.16□□□□□ -0.94
SRFBP1-201ENST00000339397 EP400Q96L91 3159 aa9.16□□□□□ -0.94
SRFBP1-201ENST00000339397 POLA2Q14181 598 aa9.16□□□□□ -0.94
SRFBP1-201ENST00000339397 NKX1-1Q15270 411 aaPredicted RBP9.16□□□□□ -0.94
SRFBP1-201ENST00000339397 EPHA10Q5JZY3 1008 aa9.16□□□□□ -0.94
SRFBP1-201ENST00000339397 PIGBQ92521 554 aa9.16□□□□□ -0.94
SRFBP1-201ENST00000339397 RBM42Q9BTD8 480 aaKnown RBP9.16□□□□□ -0.94
SRFBP1-201ENST00000339397 IBTKQ9P2D0 1353 aaPredicted RBP9.16□□□□□ -0.94
SRFBP1-201ENST00000339397 UNC5CLQ8IV45 518 aa9.16□□□□□ -0.94
SRFBP1-201ENST00000339397 TBC1D2Q9BYX2 928 aa9.16□□□□□ -0.94
SRFBP1-201ENST00000339397 BICC1Q9H694 974 aaKnown RBP9.16□□□□□ -0.94
SRFBP1-201ENST00000339397 PKD1L3Q7Z443 1732 aa9.16□□□□□ -0.94
SRFBP1-201ENST00000339397 SALL3Q9BXA9 1300 aa9.15□□□□□ -0.94
SRFBP1-201ENST00000339397 ERVV-2B6SEH9 535 aa9.15□□□□□ -0.94
SRFBP1-201ENST00000339397 GRM8O00222 908 aa9.15□□□□□ -0.94
SRFBP1-201ENST00000339397 MAP4K4O95819 1239 aaPredicted RBP9.15□□□□□ -0.94
SRFBP1-201ENST00000339397 LINS1Q8NG48 757 aa9.15□□□□□ -0.94
SRFBP1-201ENST00000339397 KIF2CQ99661 725 aa9.15□□□□□ -0.94
SRFBP1-201ENST00000339397 PXDNLA1KZ92 1463 aa9.15□□□□□ -0.94
SRFBP1-201ENST00000339397 NEURL1BA8MQ27 555 aa9.15□□□□□ -0.94
SRFBP1-201ENST00000339397 SYTL4Q96C24 671 aaPredicted RBP9.15□□□□□ -0.94
SRFBP1-201ENST00000339397 SLKQ9H2G2 1235 aaPredicted RBP9.15□□□□□ -0.94
SRFBP1-201ENST00000339397 ZNF330Q9Y3S2 320 aaPredicted RBP9.15□□□□□ -0.94
SRFBP1-201ENST00000339397 LTBP4Q8N2S1 1624 aa9.15□□□□□ -0.95
SRFBP1-201ENST00000339397 ABCC6O95255 1503 aa9.15□□□□□ -0.95
SRFBP1-201ENST00000339397 DDX58O95786 925 aaKnown RBP9.14□□□□□ -0.95
SRFBP1-201ENST00000339397 RHPN1Q8TCX5 695 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms