RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 G3BP1Q13283 466 aaKnown RBP eCLIP16.87■□□□□ 0.29
PCDH8-201ENST00000338862 PUS7Q96PZ0 661 aaKnown RBP16.87■□□□□ 0.29
PCDH8-201ENST00000338862 NUP62CLQ9H1M0 184 aa16.87■□□□□ 0.29
PCDH8-201ENST00000338862 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.87■□□□□ 0.29
PCDH8-201ENST00000338862 CCDC186Q7Z3E2 898 aa16.86■□□□□ 0.29
PCDH8-201ENST00000338862 NDUFB9Q9Y6M9 179 aa16.86■□□□□ 0.29
PCDH8-201ENST00000338862 NCOA3Q9Y6Q9 1424 aa16.86■□□□□ 0.29
PCDH8-201ENST00000338862 STK11IPQ8N1F8 1099 aa16.86■□□□□ 0.29
PCDH8-201ENST00000338862 SPATA32Q96LK8 384 aa16.86■□□□□ 0.29
PCDH8-201ENST00000338862 MAP3K19Q56UN5 1328 aa16.86■□□□□ 0.29
PCDH8-201ENST00000338862 GNAT3A8MTJ3 354 aa16.86■□□□□ 0.29
PCDH8-201ENST00000338862 MPRIPQ6WCQ1 1025 aa16.86■□□□□ 0.29
PCDH8-201ENST00000338862 CYP2E1P05181 493 aaPredicted RBP16.85■□□□□ 0.29
PCDH8-201ENST00000338862 MYL6BP14649 208 aa16.85■□□□□ 0.29
PCDH8-201ENST00000338862 UBE2HP62256 183 aa16.85■□□□□ 0.29
PCDH8-201ENST00000338862 KRT85P78386 507 aa16.85■□□□□ 0.29
PCDH8-201ENST00000338862 HS1BP3Q53T59 392 aa16.85■□□□□ 0.29
PCDH8-201ENST00000338862 GORABQ5T7V8 394 aa16.85■□□□□ 0.29
PCDH8-201ENST00000338862 EYA1Q99502 592 aa16.85■□□□□ 0.29
PCDH8-201ENST00000338862 F13A1P00488 732 aa16.85■□□□□ 0.29
PCDH8-201ENST00000338862 SNX14Q9Y5W7 946 aa16.85■□□□□ 0.29
PCDH8-201ENST00000338862 TTC21BQ7Z4L5 1316 aa16.85■□□□□ 0.29
PCDH8-201ENST00000338862 A0A087WWV3 80 aa16.85■□□□□ 0.29
PCDH8-201ENST00000338862 LARGE1O95461 756 aa16.85■□□□□ 0.29
PCDH8-201ENST00000338862 POGZQ7Z3K3 1410 aa16.84■□□□□ 0.29
PCDH8-201ENST00000338862 U2AF2P26368 475 aaKnown RBP eCLIP16.84■□□□□ 0.29
PCDH8-201ENST00000338862 PIP4K2AP48426 406 aaPredicted RBP16.84■□□□□ 0.29
PCDH8-201ENST00000338862 CEBPAP49715 358 aaPredicted RBP16.84■□□□□ 0.29
PCDH8-201ENST00000338862 CHPF2Q9P2E5 772 aa16.84■□□□□ 0.29
PCDH8-201ENST00000338862 KIF1BO60333 1816 aa16.84■□□□□ 0.29
PCDH8-201ENST00000338862 TULP4Q9NRJ4 1543 aa16.84■□□□□ 0.29
PCDH8-201ENST00000338862 SYTL4Q96C24 671 aaPredicted RBP16.84■□□□□ 0.29
PCDH8-201ENST00000338862 KIF1BPQ96EK5 621 aa16.84■□□□□ 0.29
PCDH8-201ENST00000338862 DACT1Q9NYF0 836 aa16.84■□□□□ 0.29
PCDH8-201ENST00000338862 LRMPQ12912 555 aa16.84■□□□□ 0.29
PCDH8-201ENST00000338862 KLHDC4Q8TBB5 520 aa16.84■□□□□ 0.29
PCDH8-201ENST00000338862 ERCC4Q92889 916 aaPredicted RBP16.84■□□□□ 0.29
PCDH8-201ENST00000338862 MAP3K11Q16584 847 aa16.83■□□□□ 0.29
PCDH8-201ENST00000338862 ADCK5Q3MIX3 580 aa16.83■□□□□ 0.29
PCDH8-201ENST00000338862 PYCARDQ9ULZ3 195 aa16.83■□□□□ 0.29
PCDH8-201ENST00000338862 A0A0G2JS52 829 aa16.83■□□□□ 0.28
PCDH8-201ENST00000338862 MCM5P33992 734 aa16.83■□□□□ 0.28
PCDH8-201ENST00000338862 MTERF4Q7Z6M4 381 aaKnown RBP16.83■□□□□ 0.28
PCDH8-201ENST00000338862 SF3A1Q15459 793 aaKnown RBP16.82■□□□□ 0.28
PCDH8-201ENST00000338862 CWF19L2Q2TBE0 894 aaKnown RBP16.82■□□□□ 0.28
PCDH8-201ENST00000338862 BLOC1S2Q6QNY1 142 aa16.82■□□□□ 0.28
PCDH8-201ENST00000338862 FAM135BQ49AJ0 1406 aa16.82■□□□□ 0.28
PCDH8-201ENST00000338862 RIOK3O14730 519 aaKnown RBP16.82■□□□□ 0.28
PCDH8-201ENST00000338862 PDLIM2Q96JY6 352 aa16.82■□□□□ 0.28
PCDH8-201ENST00000338862 NEUROD6Q96NK8 337 aa16.82■□□□□ 0.28
PCDH8-201ENST00000338862 PTH1RQ03431 593 aa16.82■□□□□ 0.28
PCDH8-201ENST00000338862 ANO6Q4KMQ2 910 aa16.82■□□□□ 0.28
PCDH8-201ENST00000338862 USP44Q9H0E7 712 aa16.82■□□□□ 0.28
PCDH8-201ENST00000338862 ZCCHC11Q5TAX3 1644 aaKnown RBP16.81■□□□□ 0.28
PCDH8-201ENST00000338862 RUFY3Q7L099 469 aa16.81■□□□□ 0.28
PCDH8-201ENST00000338862 DNAJC25Q9H1X3 360 aa16.81■□□□□ 0.28
PCDH8-201ENST00000338862 TET3O43151 1660 aa16.81■□□□□ 0.28
PCDH8-201ENST00000338862 LRRC7Q96NW7 1537 aa16.81■□□□□ 0.28
PCDH8-201ENST00000338862 QRICH2Q9H0J4 1663 aa16.81■□□□□ 0.28
PCDH8-201ENST00000338862 BRPF1P55201 1214 aaPredicted RBP16.81■□□□□ 0.28
PCDH8-201ENST00000338862 NCBP3Q53F19 620 aaKnown RBP16.81■□□□□ 0.28
PCDH8-201ENST00000338862 EDC3Q96F86 508 aaKnown RBP16.81■□□□□ 0.28
PCDH8-201ENST00000338862 RIC3Q7Z5B4 369 aa16.81■□□□□ 0.28
PCDH8-201ENST00000338862 RAB11FIP4Q86YS3 637 aa16.81■□□□□ 0.28
PCDH8-201ENST00000338862 FAM227BQ96M60 508 aa16.81■□□□□ 0.28
PCDH8-201ENST00000338862 LETM1O95202 739 aaPredicted RBP16.8■□□□□ 0.28
PCDH8-201ENST00000338862 TNNT1P13805 278 aa16.8■□□□□ 0.28
PCDH8-201ENST00000338862 ISM2Q6H9L7 571 aa16.8■□□□□ 0.28
PCDH8-201ENST00000338862 PTCH1Q13635 1447 aa16.8■□□□□ 0.28
PCDH8-201ENST00000338862 ERICH4A6NGS2 130 aa16.8■□□□□ 0.28
PCDH8-201ENST00000338862 KCNQ3O43525 872 aa16.8■□□□□ 0.28
PCDH8-201ENST00000338862 PIBF1Q8WXW3 757 aa16.8■□□□□ 0.28
PCDH8-201ENST00000338862 TRERF1Q96PN7 1200 aa16.8■□□□□ 0.28
PCDH8-201ENST00000338862 NRBP1Q9UHY1 535 aa16.8■□□□□ 0.28
PCDH8-201ENST00000338862 SOS1Q07889 1333 aaPredicted RBP16.79■□□□□ 0.28
PCDH8-201ENST00000338862 FAM177A1Q8N128 213 aaPredicted RBP16.79■□□□□ 0.28
PCDH8-201ENST00000338862 INTS4Q96HW7 963 aaKnown RBP16.79■□□□□ 0.28
PCDH8-201ENST00000338862 BCL2L12Q9HB09 334 aa16.79■□□□□ 0.28
PCDH8-201ENST00000338862 LIG1P18858 919 aa16.79■□□□□ 0.28
PCDH8-201ENST00000338862 CCT2P78371 535 aaKnown RBP16.79■□□□□ 0.28
PCDH8-201ENST00000338862 DNAAF4Q8WXU2 420 aa16.79■□□□□ 0.28
PCDH8-201ENST00000338862 SDF4Q9BRK5 362 aa16.79■□□□□ 0.28
PCDH8-201ENST00000338862 RBM8AQ9Y5S9 174 aaKnown RBP16.79■□□□□ 0.28
PCDH8-201ENST00000338862 ZFYVE9O95405 1425 aa16.79■□□□□ 0.28
PCDH8-201ENST00000338862 ZNF530Q6P9A1 599 aaPredicted RBP16.79■□□□□ 0.28
PCDH8-201ENST00000338862 MYRIPQ8NFW9 859 aa16.79■□□□□ 0.28
PCDH8-201ENST00000338862 GLRX3O76003 335 aaKnown RBP16.78■□□□□ 0.28
PCDH8-201ENST00000338862 CCDC112Q8NEF3 446 aa16.78■□□□□ 0.28
PCDH8-201ENST00000338862 BTBD11A6QL63 1104 aa16.78■□□□□ 0.28
PCDH8-201ENST00000338862 ZNF165P49910 485 aa16.78■□□□□ 0.28
PCDH8-201ENST00000338862 ANAPC15P60006 121 aa16.78■□□□□ 0.28
PCDH8-201ENST00000338862 NAA30Q147X3 362 aaPredicted RBP16.78■□□□□ 0.28
PCDH8-201ENST00000338862 CDC37L1Q7L3B6 337 aa16.78■□□□□ 0.28
PCDH8-201ENST00000338862 CCDC94Q9BW85 323 aaPredicted RBP16.78■□□□□ 0.28
PCDH8-201ENST00000338862 SGSM2O43147 1006 aa16.78■□□□□ 0.28
PCDH8-201ENST00000338862 HSPA4P34932 840 aa16.78■□□□□ 0.28
PCDH8-201ENST00000338862 C1orf141Q5JVX7 400 aa16.78■□□□□ 0.28
PCDH8-201ENST00000338862 RNF20Q5VTR2 975 aa16.78■□□□□ 0.28
PCDH8-201ENST00000338862 CLIP2Q9UDT6 1046 aa16.78■□□□□ 0.28
PCDH8-201ENST00000338862 CLEC17AQ6ZS10 378 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms