RNA–Protein interactions for RNA: ENST00000338732.7

LFNG-202, Transcript of LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 1 (best) BASIC

Gene LFNG, Length 1,968 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LFNG-202ENST00000338732 PI4KAP1Q8N8J0 262 aa19.48■□□□□ 0.71
LFNG-202ENST00000338732 DNAAF4Q8WXU2 420 aa19.48■□□□□ 0.71
LFNG-202ENST00000338732 SNX21Q969T3 373 aa19.48■□□□□ 0.71
LFNG-202ENST00000338732 SRCIN1Q9C0H9 1055 aa19.48■□□□□ 0.71
LFNG-202ENST00000338732 USP44Q9H0E7 712 aa19.48■□□□□ 0.71
LFNG-202ENST00000338732 STRN4Q9NRL3 753 aa19.48■□□□□ 0.71
LFNG-202ENST00000338732 ZCRB1Q8TBF4 217 aaKnown RBP19.48■□□□□ 0.71
LFNG-202ENST00000338732 C5P01031 1676 aa19.47■□□□□ 0.71
LFNG-202ENST00000338732 ADCY9O60503 1353 aa19.47■□□□□ 0.71
LFNG-202ENST00000338732 EVA1CP58658 441 aa19.47■□□□□ 0.71
LFNG-202ENST00000338732 PROSER3Q2NL68 480 aa19.47■□□□□ 0.71
LFNG-202ENST00000338732 LARP1Q6PKG0 1096 aaKnown RBP19.47■□□□□ 0.71
LFNG-202ENST00000338732 PCDH11XQ9BZA7 1347 aa19.47■□□□□ 0.71
LFNG-202ENST00000338732 PCDH11YQ9BZA8 1340 aa19.47■□□□□ 0.71
LFNG-202ENST00000338732 COL16A1Q07092 1604 aaPredicted RBP19.47■□□□□ 0.71
LFNG-202ENST00000338732 EIF5BO60841 1220 aaKnown RBP19.46■□□□□ 0.71
LFNG-202ENST00000338732 BEND3Q5T5X7 828 aa19.46■□□□□ 0.71
LFNG-202ENST00000338732 UBTFL1P0CB47 393 aaPredicted RBP19.46■□□□□ 0.71
LFNG-202ENST00000338732 IL2RBP14784 551 aa19.46■□□□□ 0.71
LFNG-202ENST00000338732 CABP4P57796 275 aa19.46■□□□□ 0.71
LFNG-202ENST00000338732 HSCBQ8IWL3 235 aa19.46■□□□□ 0.71
LFNG-202ENST00000338732 HYPKQ9NX55 129 aa19.46■□□□□ 0.71
LFNG-202ENST00000338732 LRRFIP2Q9Y608 721 aaKnown RBP19.46■□□□□ 0.71
LFNG-202ENST00000338732 ATP8B2P98198 1209 aa19.45■□□□□ 0.7
LFNG-202ENST00000338732 TBC1D9Q6ZT07 1266 aa19.45■□□□□ 0.7
LFNG-202ENST00000338732 DDX21Q9NR30 783 aaKnown RBP eCLIP19.45■□□□□ 0.7
LFNG-202ENST00000338732 PLEKHM2Q8IWE5 1019 aa19.44■□□□□ 0.7
LFNG-202ENST00000338732 TTC5Q8N0Z6 440 aa19.44■□□□□ 0.7
LFNG-202ENST00000338732 ZNF496Q96IT1 587 aaPredicted RBP19.44■□□□□ 0.7
LFNG-202ENST00000338732 CHMP5Q9NZZ3 219 aa19.44■□□□□ 0.7
LFNG-202ENST00000338732 PDIA6Q15084 440 aa19.44■□□□□ 0.7
LFNG-202ENST00000338732 PNMA6EA0A0J9YXQ4 647 aa19.43■□□□□ 0.7
LFNG-202ENST00000338732 CDC45O75419 566 aa19.43■□□□□ 0.7
LFNG-202ENST00000338732 C16orf71Q8IYS4 520 aaPredicted RBP19.43■□□□□ 0.7
LFNG-202ENST00000338732 APBB1O00213 710 aa19.43■□□□□ 0.7
LFNG-202ENST00000338732 SMARCA5O60264 1052 aaPredicted RBP19.43■□□□□ 0.7
LFNG-202ENST00000338732 KSR2Q6VAB6 950 aa19.43■□□□□ 0.7
LFNG-202ENST00000338732 SHANK3Q9BYB0 1731 aa19.43■□□□□ 0.7
LFNG-202ENST00000338732 MAP3K2Q9Y2U5 619 aa19.43■□□□□ 0.7
LFNG-202ENST00000338732 KIF2CQ99661 725 aa19.42■□□□□ 0.7
LFNG-202ENST00000338732 SNRPA1P09661 255 aaKnown RBP19.41■□□□□ 0.7
LFNG-202ENST00000338732 FMNL2Q96PY5 1086 aa19.41■□□□□ 0.7
LFNG-202ENST00000338732 COL22A1Q8NFW1 1626 aaPredicted RBP19.41■□□□□ 0.7
LFNG-202ENST00000338732 GSPT1P15170 499 aaKnown RBP19.41■□□□□ 0.7
LFNG-202ENST00000338732 HSPA1LP34931 641 aa19.41■□□□□ 0.7
LFNG-202ENST00000338732 NKX1-1Q15270 411 aaPredicted RBP19.41■□□□□ 0.7
LFNG-202ENST00000338732 BTG4Q9NY30 223 aa19.41■□□□□ 0.7
LFNG-202ENST00000338732 NBPF7P0C2Y1 421 aaPredicted RBP19.4■□□□□ 0.7
LFNG-202ENST00000338732 DDIT3P35638 169 aa19.4■□□□□ 0.7
LFNG-202ENST00000338732 TTC22Q5TAA0 569 aa19.4■□□□□ 0.7
LFNG-202ENST00000338732 EXOC6BQ9Y2D4 811 aa19.4■□□□□ 0.7
LFNG-202ENST00000338732 COL14A1Q05707 1796 aaKnown RBP19.4■□□□□ 0.7
LFNG-202ENST00000338732 ERVV-2B6SEH9 535 aa19.39■□□□□ 0.7
LFNG-202ENST00000338732 DDX58O95786 925 aaKnown RBP19.39■□□□□ 0.7
LFNG-202ENST00000338732 OTUD7AQ8TE49 926 aaPredicted RBP19.39■□□□□ 0.7
LFNG-202ENST00000338732 USP16Q9Y5T5 823 aa19.39■□□□□ 0.7
LFNG-202ENST00000338732 GLI3P10071 1580 aa19.39■□□□□ 0.69
LFNG-202ENST00000338732 ALDH1L1O75891 902 aa19.39■□□□□ 0.69
LFNG-202ENST00000338732 DDX54Q8TDD1 881 aaKnown RBP19.39■□□□□ 0.69
LFNG-202ENST00000338732 MYL6BP14649 208 aa19.38■□□□□ 0.69
LFNG-202ENST00000338732 AIMP1Q12904 312 aaKnown RBP19.38■□□□□ 0.69
LFNG-202ENST00000338732 SPRYD3Q8NCJ5 442 aa19.38■□□□□ 0.69
LFNG-202ENST00000338732 SSH3Q8TE77 659 aa19.37■□□□□ 0.69
LFNG-202ENST00000338732 IBTKQ9P2D0 1353 aaPredicted RBP19.37■□□□□ 0.69
LFNG-202ENST00000338732 MCM4P33991 863 aa19.37■□□□□ 0.69
LFNG-202ENST00000338732 LAMB4A4D0S4 1761 aa19.36■□□□□ 0.69
LFNG-202ENST00000338732 PPP1R42Q7Z4L9 355 aa19.36■□□□□ 0.69
LFNG-202ENST00000338732 LRRCC1Q9C099 1032 aa19.36■□□□□ 0.69
LFNG-202ENST00000338732 PAPPAQ13219 1627 aa19.35■□□□□ 0.69
LFNG-202ENST00000338732 POLA2Q14181 598 aa19.35■□□□□ 0.69
LFNG-202ENST00000338732 LINS1Q8NG48 757 aa19.35■□□□□ 0.69
LFNG-202ENST00000338732 CIZ1Q9ULV3 898 aaPredicted RBP19.35■□□□□ 0.69
LFNG-202ENST00000338732 CWF19L2Q2TBE0 894 aaKnown RBP19.35■□□□□ 0.69
LFNG-202ENST00000338732 LRP10Q7Z4F1 713 aa19.35■□□□□ 0.69
LFNG-202ENST00000338732 XAGE3Q8WTP9 111 aa19.35■□□□□ 0.69
LFNG-202ENST00000338732 UBR2Q8IWV8 1755 aa19.35■□□□□ 0.69
LFNG-202ENST00000338732 NUTM2BA6NNL0 878 aaPredicted RBP19.34■□□□□ 0.69
LFNG-202ENST00000338732 NUTM2EB1AL46 878 aaPredicted RBP19.34■□□□□ 0.69
LFNG-202ENST00000338732 COPS6Q7L5N1 327 aa19.34■□□□□ 0.69
LFNG-202ENST00000338732 RIC3Q7Z5B4 369 aa19.34■□□□□ 0.69
LFNG-202ENST00000338732 NUTM2AQ8IVF1 878 aaPredicted RBP19.34■□□□□ 0.69
LFNG-202ENST00000338732 C9orf78Q9NZ63 289 aaPredicted RBP19.34■□□□□ 0.69
LFNG-202ENST00000338732 JCADQ9P266 1359 aa19.34■□□□□ 0.69
LFNG-202ENST00000338732 TOGARAM1Q9Y4F4 1720 aa19.33■□□□□ 0.68
LFNG-202ENST00000338732 SRGAP3O43295 1099 aa19.33■□□□□ 0.68
LFNG-202ENST00000338732 OSBPL3Q9H4L5 887 aa19.33■□□□□ 0.68
LFNG-202ENST00000338732 KCPQ6ZWJ8 1503 aa19.33■□□□□ 0.68
LFNG-202ENST00000338732 PIP4K2AP48426 406 aaPredicted RBP19.32■□□□□ 0.68
LFNG-202ENST00000338732 DISP2A7MBM2 1401 aa19.32■□□□□ 0.68
LFNG-202ENST00000338732 SALL3Q9BXA9 1300 aa19.31■□□□□ 0.68
LFNG-202ENST00000338732 ADAMTS2O95450 1211 aa19.31■□□□□ 0.68
LFNG-202ENST00000338732 IGKV5-2P06315 115 aa19.31■□□□□ 0.68
LFNG-202ENST00000338732 PDE1AP54750 535 aa19.31■□□□□ 0.68
LFNG-202ENST00000338732 UTYO14607 1347 aa19.31■□□□□ 0.68
LFNG-202ENST00000338732 K7ELQ4 463 aaPredicted RBP19.3■□□□□ 0.68
LFNG-202ENST00000338732 GRM8O00222 908 aa19.3■□□□□ 0.68
LFNG-202ENST00000338732 RAB11FIP3O75154 756 aa19.3■□□□□ 0.68
LFNG-202ENST00000338732 SURF6O75683 361 aaKnown RBP19.3■□□□□ 0.68
LFNG-202ENST00000338732 MTX1Q13505 466 aa19.3■□□□□ 0.68
LFNG-202ENST00000338732 HDAC5Q9UQL6 1122 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms