RNA–Protein interactions for RNA: ENST00000336292.10

SYNM-202, Transcript of synemin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNM, Length 7,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-202ENST00000336292 AKNAD1Q5T1N1 836 aa21.04■□□□□ 0.96
SYNM-202ENST00000336292 PPP1R42Q7Z4L9 355 aa21.04■□□□□ 0.96
SYNM-202ENST00000336292 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.04■□□□□ 0.96
SYNM-202ENST00000336292 SLC12A7Q9Y666 1083 aa21.03■□□□□ 0.96
SYNM-202ENST00000336292 IQCA1Q86XH1 822 aa21.03■□□□□ 0.96
SYNM-202ENST00000336292 HLA-DOAP06340 250 aa21.03■□□□□ 0.96
SYNM-202ENST00000336292 TSHZ3Q63HK5 1081 aa21.03■□□□□ 0.96
SYNM-202ENST00000336292 SYCP3Q8IZU3 236 aa21.03■□□□□ 0.96
SYNM-202ENST00000336292 NFE2L2Q16236 605 aa21.03■□□□□ 0.96
SYNM-202ENST00000336292 CTCFLQ8NI51 663 aaPredicted RBP21.03■□□□□ 0.96
SYNM-202ENST00000336292 DDB1Q16531 1140 aa21.03■□□□□ 0.96
SYNM-202ENST00000336292 ISM2Q6H9L7 571 aa21.03■□□□□ 0.96
SYNM-202ENST00000336292 CCDC24Q8N4L8 307 aa21.03■□□□□ 0.96
SYNM-202ENST00000336292 LRPPRCP42704 1394 aaKnown RBP21.02■□□□□ 0.96
SYNM-202ENST00000336292 POTEJP0CG39 1038 aa21.02■□□□□ 0.96
SYNM-202ENST00000336292 CHD1LQ86WJ1 897 aa21.02■□□□□ 0.96
SYNM-202ENST00000336292 CDC5LQ99459 802 aaKnown RBP21.02■□□□□ 0.96
SYNM-202ENST00000336292 STX8Q9UNK0 236 aa21.02■□□□□ 0.96
SYNM-202ENST00000336292 TMPOP42166 694 aaKnown RBP21.02■□□□□ 0.96
SYNM-202ENST00000336292 ATF7IPQ6VMQ6 1270 aa21.02■□□□□ 0.96
SYNM-202ENST00000336292 UBE3BQ7Z3V4 1068 aa21.02■□□□□ 0.96
SYNM-202ENST00000336292 GCC1Q96CN9 775 aa21.02■□□□□ 0.96
SYNM-202ENST00000336292 NIP7Q9Y221 180 aaKnown RBP eCLIP21.02■□□□□ 0.96
SYNM-202ENST00000336292 BEGAINQ9BUH8 593 aa21.02■□□□□ 0.96
SYNM-202ENST00000336292 ARGLU1Q9NWB6 273 aaPredicted RBP21.01■□□□□ 0.95
SYNM-202ENST00000336292 TERF1P54274 439 aa21.01■□□□□ 0.95
SYNM-202ENST00000336292 ZRSR2Q15696 482 aaKnown RBP21.01■□□□□ 0.95
SYNM-202ENST00000336292 FAM83GA6ND36 823 aa21.01■□□□□ 0.95
SYNM-202ENST00000336292 PANK2Q9BZ23 570 aa21.01■□□□□ 0.95
SYNM-202ENST00000336292 CCDC113Q9H0I3 377 aa21.01■□□□□ 0.95
SYNM-202ENST00000336292 H0YHG0 523 aa21.01■□□□□ 0.95
SYNM-202ENST00000336292 CSPG5O95196 566 aa21.01■□□□□ 0.95
SYNM-202ENST00000336292 ACBD3Q9H3P7 528 aa21.01■□□□□ 0.95
SYNM-202ENST00000336292 HSP90AB3PQ58FF7 597 aa21.01■□□□□ 0.95
SYNM-202ENST00000336292 HDAC9Q9UKV0 1011 aa21.01■□□□□ 0.95
SYNM-202ENST00000336292 ATP2B3Q16720 1220 aa21■□□□□ 0.95
SYNM-202ENST00000336292 CT47B1P0C2W7 299 aaPredicted RBP21■□□□□ 0.95
SYNM-202ENST00000336292 ZMYND15Q9H091 742 aa21■□□□□ 0.95
SYNM-202ENST00000336292 SUPT6HQ7KZ85 1726 aaKnown RBP21■□□□□ 0.95
SYNM-202ENST00000336292 NF2P35240 595 aa21■□□□□ 0.95
SYNM-202ENST00000336292 TSPYL1Q9H0U9 437 aa21■□□□□ 0.95
SYNM-202ENST00000336292 GOPCQ9HD26 462 aa21■□□□□ 0.95
SYNM-202ENST00000336292 PPP1R12BO60237 982 aaPredicted RBP20.99■□□□□ 0.95
SYNM-202ENST00000336292 IFT140Q96RY7 1462 aa20.99■□□□□ 0.95
SYNM-202ENST00000336292 CWC25Q9NXE8 425 aaPredicted RBP20.99■□□□□ 0.95
SYNM-202ENST00000336292 GPR162Q16538 588 aa20.99■□□□□ 0.95
SYNM-202ENST00000336292 AMOTQ4VCS5 1084 aa20.99■□□□□ 0.95
SYNM-202ENST00000336292 TCERG1LQ5VWI1 586 aa20.99■□□□□ 0.95
SYNM-202ENST00000336292 JDP2Q8WYK2 163 aa20.99■□□□□ 0.95
SYNM-202ENST00000336292 DNAI2Q9GZS0 605 aa20.99■□□□□ 0.95
SYNM-202ENST00000336292 DACH1Q9UI36 760 aa20.98■□□□□ 0.95
SYNM-202ENST00000336292 RFX1P22670 979 aa20.98■□□□□ 0.95
SYNM-202ENST00000336292 ZCRB1Q8TBF4 217 aaKnown RBP20.98■□□□□ 0.95
SYNM-202ENST00000336292 EHMT1Q9H9B1 1298 aa20.98■□□□□ 0.95
SYNM-202ENST00000336292 MRPS9P82933 396 aaKnown RBP20.98■□□□□ 0.95
SYNM-202ENST00000336292 CATIPQ7Z7H3 387 aa20.98■□□□□ 0.95
SYNM-202ENST00000336292 KAT14Q9H8E8 782 aa20.98■□□□□ 0.95
SYNM-202ENST00000336292 HECW1Q76N89 1606 aa20.98■□□□□ 0.95
SYNM-202ENST00000336292 ANKRD18AQ8IVF6 992 aa20.98■□□□□ 0.95
SYNM-202ENST00000336292 SSRP1Q08945 709 aaKnown RBP20.97■□□□□ 0.95
SYNM-202ENST00000336292 U3KPZ7 1027 aaPredicted RBP20.97■□□□□ 0.95
SYNM-202ENST00000336292 GOLGA6L10A6NI86 522 aa20.97■□□□□ 0.95
SYNM-202ENST00000336292 MSL1Q68DK7 614 aa20.97■□□□□ 0.95
SYNM-202ENST00000336292 CADPS2Q86UW7 1296 aa20.97■□□□□ 0.95
SYNM-202ENST00000336292 BAG3O95817 575 aa20.97■□□□□ 0.95
SYNM-202ENST00000336292 LUC7LQ9NQ29 371 aaKnown RBP20.97■□□□□ 0.95
SYNM-202ENST00000336292 IFNL2Q8IZJ0 200 aa20.96■□□□□ 0.95
SYNM-202ENST00000336292 LRRC59Q96AG4 307 aaKnown RBP20.96■□□□□ 0.95
SYNM-202ENST00000336292 ADGRL1O94910 1474 aa20.96■□□□□ 0.95
SYNM-202ENST00000336292 TSPY3P0CV98 308 aa20.96■□□□□ 0.95
SYNM-202ENST00000336292 TSPY8P0CW00 308 aa20.96■□□□□ 0.95
SYNM-202ENST00000336292 HMGN5P82970 282 aaKnown RBP20.96■□□□□ 0.95
SYNM-202ENST00000336292 CCDC112Q8NEF3 446 aa20.96■□□□□ 0.95
SYNM-202ENST00000336292 SIRT1Q96EB6 747 aa20.96■□□□□ 0.95
SYNM-202ENST00000336292 NSFL1CQ9UNZ2 370 aaKnown RBP20.96■□□□□ 0.95
SYNM-202ENST00000336292 KRT85P78386 507 aa20.95■□□□□ 0.95
SYNM-202ENST00000336292 CACNA2D4Q7Z3S7 1137 aa20.95■□□□□ 0.95
SYNM-202ENST00000336292 WASF1Q92558 559 aa20.95■□□□□ 0.94
SYNM-202ENST00000336292 MYCP01106 439 aaPredicted RBP20.95■□□□□ 0.94
SYNM-202ENST00000336292 RTCBQ9Y3I0 505 aaKnown RBP20.95■□□□□ 0.94
SYNM-202ENST00000336292 CTNNA2P26232 953 aa20.95■□□□□ 0.94
SYNM-202ENST00000336292 DDX17Q92841 729 aaKnown RBP20.95■□□□□ 0.94
SYNM-202ENST00000336292 GOLGA8BA8MQT2 603 aa20.95■□□□□ 0.94
SYNM-202ENST00000336292 GOLGA8AA7E2F4 631 aa20.94■□□□□ 0.94
SYNM-202ENST00000336292 IDI1Q13907 227 aa20.94■□□□□ 0.94
SYNM-202ENST00000336292 AKNAQ7Z591 1439 aa20.94■□□□□ 0.94
SYNM-202ENST00000336292 CCDC152Q4G0S7 254 aa20.94■□□□□ 0.94
SYNM-202ENST00000336292 CCDC178Q5BJE1 867 aa20.94■□□□□ 0.94
SYNM-202ENST00000336292 HELBQ8NG08 1087 aaPredicted RBP20.94■□□□□ 0.94
SYNM-202ENST00000336292 PKD2L1Q9P0L9 805 aa20.94■□□□□ 0.94
SYNM-202ENST00000336292 WASLO00401 505 aaPredicted RBP20.94■□□□□ 0.94
SYNM-202ENST00000336292 HMGB2P26583 209 aaKnown RBP20.94■□□□□ 0.94
SYNM-202ENST00000336292 KIF1BPQ96EK5 621 aa20.94■□□□□ 0.94
SYNM-202ENST00000336292 TSG101Q99816 390 aa20.94■□□□□ 0.94
SYNM-202ENST00000336292 CEP131Q9UPN4 1083 aa20.94■□□□□ 0.94
SYNM-202ENST00000336292 TMEM266Q2M3C6 531 aa20.94■□□□□ 0.94
SYNM-202ENST00000336292 UPF3BQ9BZI7 483 aaKnown RBP20.94■□□□□ 0.94
SYNM-202ENST00000336292 ATAD2Q6PL18 1390 aa20.94■□□□□ 0.94
SYNM-202ENST00000336292 CCDC194A0A1B0GVG4 234 aa20.94■□□□□ 0.94
SYNM-202ENST00000336292 MVPQ14764 893 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms