RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 GNAI3P08754 354 aa15.56■□□□□ 0.08
LIMK1-201ENST00000336180 CCDC9Q9Y3X0 531 aaKnown RBP15.56■□□□□ 0.08
LIMK1-201ENST00000336180 EVA1CP58658 441 aa15.56■□□□□ 0.08
LIMK1-201ENST00000336180 OS9Q13438 667 aaPredicted RBP15.56■□□□□ 0.08
LIMK1-201ENST00000336180 SIL1Q9H173 461 aa15.56■□□□□ 0.08
LIMK1-201ENST00000336180 ATP5J2-PTCD1G3V325 749 aa15.56■□□□□ 0.08
LIMK1-201ENST00000336180 BEND3Q5T5X7 828 aa15.56■□□□□ 0.08
LIMK1-201ENST00000336180 UNC5CLQ8IV45 518 aa15.56■□□□□ 0.08
LIMK1-201ENST00000336180 SOS1Q07889 1333 aaPredicted RBP15.56■□□□□ 0.08
LIMK1-201ENST00000336180 ADCY9O60503 1353 aa15.55■□□□□ 0.08
LIMK1-201ENST00000336180 CDC45O75419 566 aa15.55■□□□□ 0.08
LIMK1-201ENST00000336180 SPG7Q9UQ90 795 aa15.55■□□□□ 0.08
LIMK1-201ENST00000336180 CABP4P57796 275 aa15.55■□□□□ 0.08
LIMK1-201ENST00000336180 ATP8B2P98198 1209 aa15.55■□□□□ 0.08
LIMK1-201ENST00000336180 RIC3Q7Z5B4 369 aa15.55■□□□□ 0.08
LIMK1-201ENST00000336180 XAGE3Q8WTP9 111 aa15.55■□□□□ 0.08
LIMK1-201ENST00000336180 SLC52A2Q9HAB3 445 aa15.55■□□□□ 0.08
LIMK1-201ENST00000336180 DBF4Q9UBU7 674 aaPredicted RBP15.55■□□□□ 0.08
LIMK1-201ENST00000336180 SLIT3O75094 1523 aa15.55■□□□□ 0.08
LIMK1-201ENST00000336180 TNS3Q68CZ2 1445 aa15.55■□□□□ 0.08
LIMK1-201ENST00000336180 FGD1P98174 961 aa15.55■□□□□ 0.08
LIMK1-201ENST00000336180 NOL8Q76FK4 1167 aaKnown RBP15.55■□□□□ 0.08
LIMK1-201ENST00000336180 COPS6Q7L5N1 327 aa15.55■□□□□ 0.08
LIMK1-201ENST00000336180 LRRCC1Q9C099 1032 aa15.55■□□□□ 0.08
LIMK1-201ENST00000336180 TRPM3Q9HCF6 1732 aaPredicted RBP15.54■□□□□ 0.08
LIMK1-201ENST00000336180 PDE1AP54750 535 aa15.54■□□□□ 0.08
LIMK1-201ENST00000336180 IFNL2Q8IZJ0 200 aa15.54■□□□□ 0.08
LIMK1-201ENST00000336180 KDM6AO15550 1401 aaPredicted RBP15.54■□□□□ 0.08
LIMK1-201ENST00000336180 TTC5Q8N0Z6 440 aa15.54■□□□□ 0.08
LIMK1-201ENST00000336180 KAT6BQ8WYB5 2073 aa15.53■□□□□ 0.08
LIMK1-201ENST00000336180 MYD88Q99836 296 aa15.53■□□□□ 0.08
LIMK1-201ENST00000336180 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.53■□□□□ 0.08
LIMK1-201ENST00000336180 DTNBO60941 627 aa15.52■□□□□ 0.08
LIMK1-201ENST00000336180 KIF2CQ99661 725 aa15.52■□□□□ 0.07
LIMK1-201ENST00000336180 LMTK3Q96Q04 1460 aa15.52■□□□□ 0.07
LIMK1-201ENST00000336180 PDIA6Q15084 440 aa15.51■□□□□ 0.07
LIMK1-201ENST00000336180 HSCBQ8IWL3 235 aa15.51■□□□□ 0.07
LIMK1-201ENST00000336180 LRRC37A3O60309 1634 aa15.51■□□□□ 0.07
LIMK1-201ENST00000336180 VSIG10Q8N0Z9 540 aa15.51■□□□□ 0.07
LIMK1-201ENST00000336180 VIRMAQ69YN4 1812 aaKnown RBP15.5■□□□□ 0.07
LIMK1-201ENST00000336180 HSP90AA1P07900 732 aaKnown RBP15.5■□□□□ 0.07
LIMK1-201ENST00000336180 HSP90AB1P08238 724 aaKnown RBP15.5■□□□□ 0.07
LIMK1-201ENST00000336180 MX1P20591 662 aa15.5■□□□□ 0.07
LIMK1-201ENST00000336180 SUCLG2Q96I99 432 aa15.5■□□□□ 0.07
LIMK1-201ENST00000336180 ADAMTS2O95450 1211 aa15.5■□□□□ 0.07
LIMK1-201ENST00000336180 A1BGP04217 495 aa15.5■□□□□ 0.07
LIMK1-201ENST00000336180 SYTL4Q96C24 671 aaPredicted RBP15.5■□□□□ 0.07
LIMK1-201ENST00000336180 KSR2Q6VAB6 950 aa15.49■□□□□ 0.07
LIMK1-201ENST00000336180 IL25Q9H293 177 aa15.49■□□□□ 0.07
LIMK1-201ENST00000336180 BTG4Q9NY30 223 aa15.49■□□□□ 0.07
LIMK1-201ENST00000336180 FAM208AQ9UK61 1670 aaKnown RBP15.49■□□□□ 0.07
LIMK1-201ENST00000336180 ZCRB1Q8TBF4 217 aaKnown RBP15.49■□□□□ 0.07
LIMK1-201ENST00000336180 BICC1Q9H694 974 aaKnown RBP15.48■□□□□ 0.07
LIMK1-201ENST00000336180 BABAM1Q9NWV8 329 aa15.48■□□□□ 0.07
LIMK1-201ENST00000336180 IGKV5-2P06315 115 aa15.48■□□□□ 0.07
LIMK1-201ENST00000336180 RHPN1Q8TCX5 695 aa15.48■□□□□ 0.07
LIMK1-201ENST00000336180 PIP4K2BP78356 416 aa15.47■□□□□ 0.07
LIMK1-201ENST00000336180 EPHA10Q5JZY3 1008 aa15.47■□□□□ 0.07
LIMK1-201ENST00000336180 CCDC85AQ96PX6 553 aaPredicted RBP15.47■□□□□ 0.07
LIMK1-201ENST00000336180 ZBTB3Q9H5J0 574 aa15.47■□□□□ 0.07
LIMK1-201ENST00000336180 NUTM2BA6NNL0 878 aaPredicted RBP15.47■□□□□ 0.07
LIMK1-201ENST00000336180 NUTM2EB1AL46 878 aaPredicted RBP15.47■□□□□ 0.07
LIMK1-201ENST00000336180 NUTM2AQ8IVF1 878 aaPredicted RBP15.47■□□□□ 0.07
LIMK1-201ENST00000336180 GZF1Q9H116 711 aaPredicted RBP15.47■□□□□ 0.07
LIMK1-201ENST00000336180 DDX21Q9NR30 783 aaKnown RBP eCLIP15.47■□□□□ 0.07
LIMK1-201ENST00000336180 CHMP3Q9Y3E7 222 aa15.47■□□□□ 0.07
LIMK1-201ENST00000336180 DCAF5Q96JK2 942 aa15.47■□□□□ 0.07
LIMK1-201ENST00000336180 CCDC8Q9H0W5 538 aaPredicted RBP15.47■□□□□ 0.07
LIMK1-201ENST00000336180 NDUFB9Q9Y6M9 179 aa15.47■□□□□ 0.07
LIMK1-201ENST00000336180 USP54Q70EL1 1684 aa15.47■□□□□ 0.07
LIMK1-201ENST00000336180 ALS2Q96Q42 1657 aa15.47■□□□□ 0.07
LIMK1-201ENST00000336180 TTLL7Q6ZT98 887 aa15.46■□□□□ 0.07
LIMK1-201ENST00000336180 ANO2Q9NQ90 1003 aa15.46■□□□□ 0.07
LIMK1-201ENST00000336180 IBTKQ9P2D0 1353 aaPredicted RBP15.46■□□□□ 0.07
LIMK1-201ENST00000336180 CAMTA1Q9Y6Y1 1673 aa15.46■□□□□ 0.07
LIMK1-201ENST00000336180 SSH3Q8TE77 659 aa15.46■□□□□ 0.07
LIMK1-201ENST00000336180 KAZALD1Q96I82 304 aa15.46■□□□□ 0.07
LIMK1-201ENST00000336180 LARP6Q9BRS8 491 aaKnown RBP15.46■□□□□ 0.07
LIMK1-201ENST00000336180 ANTXR1Q9H6X2 564 aa15.46■□□□□ 0.07
LIMK1-201ENST00000336180 RBM25P49756 843 aaKnown RBP15.45■□□□□ 0.06
LIMK1-201ENST00000336180 FOXD4L5Q5VV16 416 aaPredicted RBP15.45■□□□□ 0.06
LIMK1-201ENST00000336180 UBE3BQ7Z3V4 1068 aa15.45■□□□□ 0.06
LIMK1-201ENST00000336180 FOXD4L4Q8WXT5 416 aaPredicted RBP15.45■□□□□ 0.06
LIMK1-201ENST00000336180 HYPKQ9NX55 129 aa15.45■□□□□ 0.06
LIMK1-201ENST00000336180 WDR17Q8IZU2 1322 aa15.45■□□□□ 0.06
LIMK1-201ENST00000336180 GRM8O00222 908 aa15.44■□□□□ 0.06
LIMK1-201ENST00000336180 USP26Q9BXU7 913 aa15.44■□□□□ 0.06
LIMK1-201ENST00000336180 KIF1AQ12756 1690 aa15.44■□□□□ 0.06
LIMK1-201ENST00000336180 SNRPA1P09661 255 aaKnown RBP15.44■□□□□ 0.06
LIMK1-201ENST00000336180 RBM10P98175 930 aaKnown RBP15.44■□□□□ 0.06
LIMK1-201ENST00000336180 FMNL2Q96PY5 1086 aa15.44■□□□□ 0.06
LIMK1-201ENST00000336180 TLR7Q9NYK1 1049 aaKnown RBP15.44■□□□□ 0.06
LIMK1-201ENST00000336180 SOS2Q07890 1332 aaPredicted RBP15.44■□□□□ 0.06
LIMK1-201ENST00000336180 HOXB7P09629 217 aa15.43■□□□□ 0.06
LIMK1-201ENST00000336180 ANKRD13DQ6ZTN6 518 aa15.43■□□□□ 0.06
LIMK1-201ENST00000336180 PALD1Q9ULE6 856 aa15.43■□□□□ 0.06
LIMK1-201ENST00000336180 NBPF26B4DH59 902 aa15.43■□□□□ 0.06
LIMK1-201ENST00000336180 IL2RBP14784 551 aa15.43■□□□□ 0.06
LIMK1-201ENST00000336180 NBPF14Q5TI25 921 aa15.43■□□□□ 0.06
LIMK1-201ENST00000336180 NBPF10Q6P3W6 841 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms