RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ATRIPQ8WXE1 791 aa11.34□□□□□ -0.59
COL4A6-201ENST00000334504 PUS7Q96PZ0 661 aaKnown RBP11.34□□□□□ -0.59
COL4A6-201ENST00000334504 PANK2Q9BZ23 570 aa11.34□□□□□ -0.59
COL4A6-201ENST00000334504 C11orf95C9JLR9 678 aaPredicted RBP11.34□□□□□ -0.59
COL4A6-201ENST00000334504 DDX54Q8TDD1 881 aaKnown RBP11.34□□□□□ -0.59
COL4A6-201ENST00000334504 SMARCA5O60264 1052 aaPredicted RBP11.34□□□□□ -0.59
COL4A6-201ENST00000334504 TMEM57Q8N5G2 664 aa11.34□□□□□ -0.59
COL4A6-201ENST00000334504 RASSF4Q9H2L5 321 aa11.34□□□□□ -0.59
COL4A6-201ENST00000334504 ANKRD18BA2A2Z9 1011 aa11.34□□□□□ -0.59
COL4A6-201ENST00000334504 KIF6Q6ZMV9 814 aa11.34□□□□□ -0.59
COL4A6-201ENST00000334504 CCDC121Q6ZUS5 278 aa11.34□□□□□ -0.59
COL4A6-201ENST00000334504 CNNM3Q8NE01 707 aa11.34□□□□□ -0.59
COL4A6-201ENST00000334504 GBP6Q6ZN66 633 aa11.33□□□□□ -0.6
COL4A6-201ENST00000334504 CFAP57Q96MR6 1250 aa11.33□□□□□ -0.6
COL4A6-201ENST00000334504 VPS18Q9P253 973 aa11.33□□□□□ -0.6
COL4A6-201ENST00000334504 MACROD2A1Z1Q3 448 aa11.33□□□□□ -0.6
COL4A6-201ENST00000334504 SRGAP3O43295 1099 aa11.33□□□□□ -0.6
COL4A6-201ENST00000334504 KLHL40Q2TBA0 621 aa11.33□□□□□ -0.6
COL4A6-201ENST00000334504 NSRP1Q9H0G5 558 aaKnown RBP11.33□□□□□ -0.6
COL4A6-201ENST00000334504 PPP1R12BO60237 982 aaPredicted RBP11.33□□□□□ -0.6
COL4A6-201ENST00000334504 HDGFL1Q5TGJ6 251 aa11.33□□□□□ -0.6
COL4A6-201ENST00000334504 GNL3LQ9NVN8 582 aaKnown RBP11.33□□□□□ -0.6
COL4A6-201ENST00000334504 PRPF4BQ13523 1007 aaKnown RBP11.33□□□□□ -0.6
COL4A6-201ENST00000334504 ZBTB9Q96C00 473 aa11.33□□□□□ -0.6
COL4A6-201ENST00000334504 SH2B1Q9NRF2 756 aaPredicted RBP11.33□□□□□ -0.6
COL4A6-201ENST00000334504 HCLS1P14317 486 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-201ENST00000334504 NLRP2Q9NX02 1062 aa11.32□□□□□ -0.6
COL4A6-201ENST00000334504 FSD2A1L4K1 749 aa11.32□□□□□ -0.6
COL4A6-201ENST00000334504 ZNF165P49910 485 aa11.32□□□□□ -0.6
COL4A6-201ENST00000334504 OTUD6BQ8N6M0 293 aa11.32□□□□□ -0.6
COL4A6-201ENST00000334504 DNAI1Q9UI46 699 aa11.32□□□□□ -0.6
COL4A6-201ENST00000334504 MROH2BQ7Z745 1585 aa11.32□□□□□ -0.6
COL4A6-201ENST00000334504 ISM2Q6H9L7 571 aa11.32□□□□□ -0.6
COL4A6-201ENST00000334504 WDR66Q8TBY9 1149 aa11.32□□□□□ -0.6
COL4A6-201ENST00000334504 LARP6Q9BRS8 491 aaKnown RBP11.32□□□□□ -0.6
COL4A6-201ENST00000334504 NAA25Q14CX7 972 aa11.32□□□□□ -0.6
COL4A6-201ENST00000334504 CPSF2Q9P2I0 782 aaKnown RBP11.32□□□□□ -0.6
COL4A6-201ENST00000334504 CEP83Q9Y592 693 aa11.32□□□□□ -0.6
COL4A6-201ENST00000334504 SEPT6Q14141 434 aa11.32□□□□□ -0.6
COL4A6-201ENST00000334504 PTPRGP23470 1445 aa11.32□□□□□ -0.6
COL4A6-201ENST00000334504 CTAGE15A4D2H0 777 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 CTAGE8P0CG41 777 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 CCDC96Q2M329 555 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 GIMAP6Q6P9H5 292 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 CTAGE6Q86UF2 777 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 CTAGE4Q8IX94 777 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 C8orf76Q96K31 380 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 HOMER2Q9NSB8 354 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 TFIP11Q9UBB9 837 aaKnown RBP11.31□□□□□ -0.6
COL4A6-201ENST00000334504 MXRA7P84157 204 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 OGFRQ9NZT2 677 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 A0A1B0GUL7 405 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 GJB2P29033 226 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 CKAP4Q07065 602 aaKnown RBP11.31□□□□□ -0.6
COL4A6-201ENST00000334504 C20orf194Q5TEA3 1177 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 NBPF11Q86T75 865 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 OPA1O60313 960 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 ZNF76P36508 570 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 RPAP2Q8IXW5 612 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-201ENST00000334504 EBAG9O00559 213 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 RSRC1Q96IZ7 334 aaKnown RBP11.31□□□□□ -0.6
COL4A6-201ENST00000334504 NAP1L3Q99457 506 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-201ENST00000334504 PAIP2Q9BPZ3 127 aaKnown RBP11.31□□□□□ -0.6
COL4A6-201ENST00000334504 RRBP1Q9P2E9 1410 aaKnown RBP11.31□□□□□ -0.6
COL4A6-201ENST00000334504 A0A1W2PRG0 241 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 SLU7O95391 586 aaKnown RBP11.31□□□□□ -0.6
COL4A6-201ENST00000334504 SKILP12757 684 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 KRBA2Q6ZNG9 492 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 CCDC155Q8N6L0 562 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 ZKSCAN5Q9Y2L8 839 aa11.31□□□□□ -0.6
COL4A6-201ENST00000334504 MX1P20591 662 aa11.3□□□□□ -0.6
COL4A6-201ENST00000334504 MTIF2P46199 727 aaKnown RBP11.3□□□□□ -0.6
COL4A6-201ENST00000334504 FGFR1OPO95684 399 aaKnown RBP11.3□□□□□ -0.6
COL4A6-201ENST00000334504 CCDC186Q7Z3E2 898 aa11.3□□□□□ -0.6
COL4A6-201ENST00000334504 LIMCH1Q9UPQ0 1083 aa11.3□□□□□ -0.6
COL4A6-201ENST00000334504 EXOC6BQ9Y2D4 811 aa11.3□□□□□ -0.6
COL4A6-201ENST00000334504 NOP2P46087 812 aaKnown RBP11.3□□□□□ -0.6
COL4A6-201ENST00000334504 UBA5Q9GZZ9 404 aa11.3□□□□□ -0.6
COL4A6-201ENST00000334504 KIF4AO95239 1232 aa11.3□□□□□ -0.6
COL4A6-201ENST00000334504 UBE2HP62256 183 aa11.3□□□□□ -0.6
COL4A6-201ENST00000334504 SLFN5Q08AF3 891 aa11.3□□□□□ -0.6
COL4A6-201ENST00000334504 DDX23Q9BUQ8 820 aaKnown RBP11.3□□□□□ -0.6
COL4A6-201ENST00000334504 VGLL3A8MV65 326 aa11.3□□□□□ -0.6
COL4A6-201ENST00000334504 SARNPP82979 210 aaKnown RBP11.3□□□□□ -0.6
COL4A6-201ENST00000334504 ANKS4BQ8N8V4 417 aa11.3□□□□□ -0.6
COL4A6-201ENST00000334504 STX6O43752 255 aa11.29□□□□□ -0.6
COL4A6-201ENST00000334504 USP5P45974 858 aa11.29□□□□□ -0.6
COL4A6-201ENST00000334504 CCDC114Q96M63 670 aa11.29□□□□□ -0.6
COL4A6-201ENST00000334504 KIF5BP33176 963 aa11.29□□□□□ -0.6
COL4A6-201ENST00000334504 SPINK5Q9NQ38 1064 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-201ENST00000334504 CTNNA2P26232 953 aa11.29□□□□□ -0.6
COL4A6-201ENST00000334504 GOLGA1Q92805 767 aa11.29□□□□□ -0.6
COL4A6-201ENST00000334504 DRC1Q96MC2 740 aa11.29□□□□□ -0.6
COL4A6-201ENST00000334504 EHBP1Q8NDI1 1231 aa11.28□□□□□ -0.6
COL4A6-201ENST00000334504 TMEM132EQ6IEE7 984 aa11.28□□□□□ -0.6
COL4A6-201ENST00000334504 SCAPERQ9BY12 1400 aa11.28□□□□□ -0.6
COL4A6-201ENST00000334504 ANO6Q4KMQ2 910 aa11.28□□□□□ -0.6
COL4A6-201ENST00000334504 PPP1R14CQ8TAE6 165 aa11.28□□□□□ -0.6
COL4A6-201ENST00000334504 TTC12Q9H892 705 aaPredicted RBP11.28□□□□□ -0.6
COL4A6-201ENST00000334504 RAB11FIP3O75154 756 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms