RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 CHD2O14647 1828 aaKnown RBP19.63■□□□□ 0.73
PDGFB-201ENST00000331163 GNAI3P08754 354 aa19.63■□□□□ 0.73
PDGFB-201ENST00000331163 KIF6Q6ZMV9 814 aa19.63■□□□□ 0.73
PDGFB-201ENST00000331163 RTL1A6NKG5 1358 aa19.63■□□□□ 0.73
PDGFB-201ENST00000331163 HSP90AA1P07900 732 aaKnown RBP19.63■□□□□ 0.73
PDGFB-201ENST00000331163 CHMP4AQ9BY43 222 aa19.63■□□□□ 0.73
PDGFB-201ENST00000331163 USP32Q8NFA0 1604 aa19.62■□□□□ 0.73
PDGFB-201ENST00000331163 ZBTB7BO15156 539 aaPredicted RBP19.61■□□□□ 0.73
PDGFB-201ENST00000331163 GORABQ5T7V8 394 aa19.61■□□□□ 0.73
PDGFB-201ENST00000331163 AFF2P51816 1311 aa19.61■□□□□ 0.73
PDGFB-201ENST00000331163 ZBTB40Q9NUA8 1239 aa19.61■□□□□ 0.73
PDGFB-201ENST00000331163 XRN1Q8IZH2 1706 aaKnown RBP19.6■□□□□ 0.73
PDGFB-201ENST00000331163 NOL8Q76FK4 1167 aaKnown RBP19.6■□□□□ 0.73
PDGFB-201ENST00000331163 KLHL34Q8N239 644 aa19.6■□□□□ 0.73
PDGFB-201ENST00000331163 PPP1R42Q7Z4L9 355 aa19.6■□□□□ 0.73
PDGFB-201ENST00000331163 SRCAPQ6ZRS2 3230 aa19.6■□□□□ 0.73
PDGFB-201ENST00000331163 KIF20BQ96Q89 1820 aa19.6■□□□□ 0.73
PDGFB-201ENST00000331163 HYPKQ9NX55 129 aa19.6■□□□□ 0.73
PDGFB-201ENST00000331163 UNC5CLQ8IV45 518 aa19.59■□□□□ 0.73
PDGFB-201ENST00000331163 OTUD7AQ8TE49 926 aaPredicted RBP19.59■□□□□ 0.73
PDGFB-201ENST00000331163 G3BP1Q13283 466 aaKnown RBP eCLIP19.58■□□□□ 0.73
PDGFB-201ENST00000331163 KDRP35968 1356 aa19.58■□□□□ 0.72
PDGFB-201ENST00000331163 TPRNQ4KMQ1 711 aa19.58■□□□□ 0.72
PDGFB-201ENST00000331163 FAM89AQ96GI7 184 aa19.58■□□□□ 0.72
PDGFB-201ENST00000331163 SLKQ9H2G2 1235 aaPredicted RBP19.58■□□□□ 0.72
PDGFB-201ENST00000331163 PXDNQ92626 1479 aa19.57■□□□□ 0.72
PDGFB-201ENST00000331163 FOXD4L1Q9NU39 408 aa19.57■□□□□ 0.72
PDGFB-201ENST00000331163 MEGF6O75095 1541 aa19.57■□□□□ 0.72
PDGFB-201ENST00000331163 PNMA6EA0A0J9YXQ4 647 aa19.57■□□□□ 0.72
PDGFB-201ENST00000331163 PTF1AQ7RTS3 328 aa19.57■□□□□ 0.72
PDGFB-201ENST00000331163 CHD1LQ86WJ1 897 aa19.57■□□□□ 0.72
PDGFB-201ENST00000331163 DDX21Q9NR30 783 aaKnown RBP eCLIP19.57■□□□□ 0.72
PDGFB-201ENST00000331163 PTPRCP08575 1304 aa19.56■□□□□ 0.72
PDGFB-201ENST00000331163 TRIM37O94972 964 aa19.56■□□□□ 0.72
PDGFB-201ENST00000331163 KSR2Q6VAB6 950 aa19.56■□□□□ 0.72
PDGFB-201ENST00000331163 PIK3C2AO00443 1686 aa19.55■□□□□ 0.72
PDGFB-201ENST00000331163 TRMT112Q9UI30 125 aaKnown RBP19.55■□□□□ 0.72
PDGFB-201ENST00000331163 CCDC8Q9H0W5 538 aaPredicted RBP19.55■□□□□ 0.72
PDGFB-201ENST00000331163 PPP1R1BQ9UD71 204 aaPredicted RBP19.55■□□□□ 0.72
PDGFB-201ENST00000331163 ZBTB1Q9Y2K1 713 aa19.55■□□□□ 0.72
PDGFB-201ENST00000331163 IFIT2P09913 472 aaKnown RBP19.54■□□□□ 0.72
PDGFB-201ENST00000331163 KCNJ4P48050 445 aa19.54■□□□□ 0.72
PDGFB-201ENST00000331163 FMN2Q9NZ56 1722 aa19.54■□□□□ 0.72
PDGFB-201ENST00000331163 SEPT12Q8IYM1 358 aa19.53■□□□□ 0.72
PDGFB-201ENST00000331163 MARCH10Q8NA82 808 aaPredicted RBP19.53■□□□□ 0.72
PDGFB-201ENST00000331163 DCCP43146 1447 aa19.53■□□□□ 0.72
PDGFB-201ENST00000331163 KIF24Q5T7B8 1368 aa19.53■□□□□ 0.72
PDGFB-201ENST00000331163 IQSEC2Q5JU85 1478 aa19.52■□□□□ 0.72
PDGFB-201ENST00000331163 CRB1P82279 1406 aa19.52■□□□□ 0.72
PDGFB-201ENST00000331163 SYNE4Q8N205 404 aa19.52■□□□□ 0.72
PDGFB-201ENST00000331163 KNDC1Q76NI1 1749 aa19.52■□□□□ 0.72
PDGFB-201ENST00000331163 ARHGAP45Q92619 1136 aa19.52■□□□□ 0.71
PDGFB-201ENST00000331163 USP44Q9H0E7 712 aa19.52■□□□□ 0.71
PDGFB-201ENST00000331163 CEP85Q6P2H3 762 aa19.51■□□□□ 0.71
PDGFB-201ENST00000331163 DZIP3Q86Y13 1208 aaKnown RBP19.51■□□□□ 0.71
PDGFB-201ENST00000331163 LMBR1LQ6UX01 489 aa19.51■□□□□ 0.71
PDGFB-201ENST00000331163 ADGRB2O60241 1585 aa19.51■□□□□ 0.71
PDGFB-201ENST00000331163 GNPATO15228 680 aa19.5■□□□□ 0.71
PDGFB-201ENST00000331163 ATG3Q9NT62 314 aa19.5■□□□□ 0.71
PDGFB-201ENST00000331163 GRM8O00222 908 aa19.5■□□□□ 0.71
PDGFB-201ENST00000331163 ZNF594Q96JF6 807 aaPredicted RBP19.5■□□□□ 0.71
PDGFB-201ENST00000331163 ZNF142P52746 1687 aaPredicted RBP19.49■□□□□ 0.71
PDGFB-201ENST00000331163 HCLS1P14317 486 aaPredicted RBP19.49■□□□□ 0.71
PDGFB-201ENST00000331163 DNAJC2Q99543 621 aaKnown RBP19.49■□□□□ 0.71
PDGFB-201ENST00000331163 LRRCC1Q9C099 1032 aa19.49■□□□□ 0.71
PDGFB-201ENST00000331163 BICC1Q9H694 974 aaKnown RBP19.49■□□□□ 0.71
PDGFB-201ENST00000331163 ERVV-2B6SEH9 535 aa19.49■□□□□ 0.71
PDGFB-201ENST00000331163 GOLGB1Q14789 3259 aaKnown RBP19.49■□□□□ 0.71
PDGFB-201ENST00000331163 AACSQ86V21 672 aa19.49■□□□□ 0.71
PDGFB-201ENST00000331163 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.49■□□□□ 0.71
PDGFB-201ENST00000331163 CCNL1Q9UK58 526 aaPredicted RBP19.49■□□□□ 0.71
PDGFB-201ENST00000331163 LOC102724428A0A0B4J2F2 783 aa19.48■□□□□ 0.71
PDGFB-201ENST00000331163 SIK1P57059 783 aa19.48■□□□□ 0.71
PDGFB-201ENST00000331163 HELBQ8NG08 1087 aaPredicted RBP19.48■□□□□ 0.71
PDGFB-201ENST00000331163 ZNF219Q9P2Y4 722 aaPredicted RBP19.48■□□□□ 0.71
PDGFB-201ENST00000331163 NDUFB9Q9Y6M9 179 aa19.48■□□□□ 0.71
PDGFB-201ENST00000331163 CAMTA1Q9Y6Y1 1673 aa19.48■□□□□ 0.71
PDGFB-201ENST00000331163 RPAP2Q8IXW5 612 aaPredicted RBP19.48■□□□□ 0.71
PDGFB-201ENST00000331163 CLASRPQ8N2M8 674 aaKnown RBP19.48■□□□□ 0.71
PDGFB-201ENST00000331163 BCL11BQ9C0K0 894 aaPredicted RBP19.48■□□□□ 0.71
PDGFB-201ENST00000331163 GZF1Q9H116 711 aaPredicted RBP19.48■□□□□ 0.71
PDGFB-201ENST00000331163 PEAK1Q9H792 1746 aa19.47■□□□□ 0.71
PDGFB-201ENST00000331163 SHPRHQ149N8 1683 aa19.47■□□□□ 0.71
PDGFB-201ENST00000331163 INTS3Q68E01 1043 aaKnown RBP19.47■□□□□ 0.71
PDGFB-201ENST00000331163 CASC1Q6TDU7 716 aa19.47■□□□□ 0.71
PDGFB-201ENST00000331163 SIRT2Q8IXJ6 389 aa19.47■□□□□ 0.71
PDGFB-201ENST00000331163 NIP7Q9Y221 180 aaKnown RBP eCLIP19.47■□□□□ 0.71
PDGFB-201ENST00000331163 CNNM1Q9NRU3 951 aa19.46■□□□□ 0.71
PDGFB-201ENST00000331163 LINS1Q8NG48 757 aa19.46■□□□□ 0.71
PDGFB-201ENST00000331163 SUCLG2Q96I99 432 aa19.46■□□□□ 0.71
PDGFB-201ENST00000331163 JCADQ9P266 1359 aa19.46■□□□□ 0.71
PDGFB-201ENST00000331163 SPATA31A1Q5TZJ5 1347 aa19.46■□□□□ 0.71
PDGFB-201ENST00000331163 NBPF26B4DH59 902 aa19.46■□□□□ 0.71
PDGFB-201ENST00000331163 CCDC57Q2TAC2 916 aa19.46■□□□□ 0.71
PDGFB-201ENST00000331163 NBPF14Q5TI25 921 aa19.46■□□□□ 0.71
PDGFB-201ENST00000331163 NBPF10Q6P3W6 841 aaKnown RBP19.46■□□□□ 0.71
PDGFB-201ENST00000331163 NBPF15Q8N660 670 aa19.46■□□□□ 0.71
PDGFB-201ENST00000331163 MON2Q7Z3U7 1717 aa19.46■□□□□ 0.71
PDGFB-201ENST00000331163 ZPR1O75312 459 aa19.45■□□□□ 0.7
PDGFB-201ENST00000331163 UBE2Q2Q8WVN8 375 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms