RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 ALKQ9UM73 1620 aa29.04■■■□□ 2.24
SOX1-201ENST00000330949 STX6O43752 255 aa29.03■■■□□ 2.24
SOX1-201ENST00000330949 LMOD3Q0VAK6 560 aa29.03■■■□□ 2.24
SOX1-201ENST00000330949 F13A1P00488 732 aa29.02■■■□□ 2.24
SOX1-201ENST00000330949 HAP1P54257 671 aaPredicted RBP29.02■■■□□ 2.24
SOX1-201ENST00000330949 CCDC186Q7Z3E2 898 aa29.02■■■□□ 2.24
SOX1-201ENST00000330949 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.02■■■□□ 2.24
SOX1-201ENST00000330949 EPB41L2O43491 1005 aaKnown RBP29.01■■■□□ 2.23
SOX1-201ENST00000330949 MSH6P52701 1360 aa29.01■■■□□ 2.23
SOX1-201ENST00000330949 CHMLP26374 656 aa29■■■□□ 2.23
SOX1-201ENST00000330949 SYT1P21579 422 aa28.99■■■□□ 2.23
SOX1-201ENST00000330949 NAA30Q147X3 362 aaPredicted RBP28.99■■■□□ 2.23
SOX1-201ENST00000330949 DRC7Q8IY82 874 aa28.98■■■□□ 2.23
SOX1-201ENST00000330949 TUBGCP6Q96RT7 1819 aa28.98■■■□□ 2.23
SOX1-201ENST00000330949 MEIS3Q99687 375 aa28.98■■■□□ 2.23
SOX1-201ENST00000330949 FAM53CQ9NYF3 392 aa28.98■■■□□ 2.23
SOX1-201ENST00000330949 LRMPQ12912 555 aa28.97■■■□□ 2.23
SOX1-201ENST00000330949 TPD52L1Q16890 204 aaPredicted RBP28.97■■■□□ 2.23
SOX1-201ENST00000330949 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.97■■■□□ 2.23
SOX1-201ENST00000330949 KRT24Q2M2I5 525 aa28.97■■■□□ 2.23
SOX1-201ENST00000330949 ZSCAN25Q6NSZ9 544 aa28.97■■■□□ 2.23
SOX1-201ENST00000330949 TULP2O00295 520 aa28.96■■■□□ 2.23
SOX1-201ENST00000330949 TSPYL1Q9H0U9 437 aa28.96■■■□□ 2.23
SOX1-201ENST00000330949 KMT5BQ4FZB7 885 aa28.95■■■□□ 2.23
SOX1-201ENST00000330949 TSPOAP1O95153 1857 aa28.95■■■□□ 2.22
SOX1-201ENST00000330949 CPSF1Q10570 1443 aaKnown RBP28.95■■■□□ 2.22
SOX1-201ENST00000330949 CEP135Q66GS9 1140 aa28.95■■■□□ 2.22
SOX1-201ENST00000330949 RIMS2Q9UQ26 1411 aa28.95■■■□□ 2.22
SOX1-201ENST00000330949 PTPRCP08575 1304 aa28.94■■■□□ 2.22
SOX1-201ENST00000330949 SMC3Q9UQE7 1217 aa28.94■■■□□ 2.22
SOX1-201ENST00000330949 SALL3Q9BXA9 1300 aa28.94■■■□□ 2.22
SOX1-201ENST00000330949 HSPA4P34932 840 aa28.93■■■□□ 2.22
SOX1-201ENST00000330949 MAP3K11Q16584 847 aa28.93■■■□□ 2.22
SOX1-201ENST00000330949 RILPL2Q969X0 211 aa28.93■■■□□ 2.22
SOX1-201ENST00000330949 KIAA0232Q92628 1395 aa28.93■■■□□ 2.22
SOX1-201ENST00000330949 TRIM6-TRIM34B2RNG4 842 aa28.93■■■□□ 2.22
SOX1-201ENST00000330949 SLFNL1Q499Z3 407 aa28.93■■■□□ 2.22
SOX1-201ENST00000330949 KIF20BQ96Q89 1820 aa28.92■■■□□ 2.22
SOX1-201ENST00000330949 ERICH4A6NGS2 130 aa28.91■■■□□ 2.22
SOX1-201ENST00000330949 TYRO3Q06418 890 aa28.91■■■□□ 2.22
SOX1-201ENST00000330949 LUZP1Q86V48 1076 aa28.91■■■□□ 2.22
SOX1-201ENST00000330949 AEBP1Q8IUX7 1158 aa28.91■■■□□ 2.22
SOX1-201ENST00000330949 MRVI1Q9Y6F6 885 aa28.91■■■□□ 2.22
SOX1-201ENST00000330949 METP08581 1390 aa28.91■■■□□ 2.22
SOX1-201ENST00000330949 IL13P35225 146 aa28.91■■■□□ 2.22
SOX1-201ENST00000330949 DNM1Q05193 864 aaKnown RBP28.91■■■□□ 2.22
SOX1-201ENST00000330949 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.91■■■□□ 2.22
SOX1-201ENST00000330949 TRIM5Q9C035 493 aa28.91■■■□□ 2.22
SOX1-201ENST00000330949 CCDC171Q6TFL3 1326 aa28.91■■■□□ 2.22
SOX1-201ENST00000330949 DLG5Q8TDM6 1919 aa28.91■■■□□ 2.22
SOX1-201ENST00000330949 TSHZ3Q63HK5 1081 aa28.9■■■□□ 2.22
SOX1-201ENST00000330949 PLPPR3Q6T4P5 718 aa28.9■■■□□ 2.22
SOX1-201ENST00000330949 PLA2G4DQ86XP0 818 aa28.9■■■□□ 2.22
SOX1-201ENST00000330949 COG3Q96JB2 828 aa28.9■■■□□ 2.22
SOX1-201ENST00000330949 NUP62CLQ9H1M0 184 aa28.9■■■□□ 2.22
SOX1-201ENST00000330949 DNAJC5Q9H3Z4 198 aa28.9■■■□□ 2.22
SOX1-201ENST00000330949 LIMCH1Q9UPQ0 1083 aa28.9■■■□□ 2.22
SOX1-201ENST00000330949 ZNF75DP51815 510 aa28.89■■■□□ 2.22
SOX1-201ENST00000330949 ZNF592Q92610 1267 aa28.89■■■□□ 2.22
SOX1-201ENST00000330949 NRBP1Q9UHY1 535 aa28.89■■■□□ 2.22
SOX1-201ENST00000330949 A2ML1A8K2U0 1454 aa28.89■■■□□ 2.22
SOX1-201ENST00000330949 PLCD3Q8N3E9 789 aa28.89■■■□□ 2.21
SOX1-201ENST00000330949 NUDT16Q96DE0 195 aaKnown RBP28.89■■■□□ 2.21
SOX1-201ENST00000330949 ERO1AQ96HE7 468 aa28.89■■■□□ 2.21
SOX1-201ENST00000330949 WASLO00401 505 aaPredicted RBP28.88■■■□□ 2.21
SOX1-201ENST00000330949 LRRCC1Q9C099 1032 aa28.88■■■□□ 2.21
SOX1-201ENST00000330949 ZNF215Q9UL58 517 aaPredicted RBP28.88■■■□□ 2.21
SOX1-201ENST00000330949 TTC14Q96N46 770 aa28.87■■■□□ 2.21
SOX1-201ENST00000330949 RBM6P78332 1123 aaKnown RBP28.86■■■□□ 2.21
SOX1-201ENST00000330949 TAF7LQ5H9L4 462 aa28.86■■■□□ 2.21
SOX1-201ENST00000330949 FBXO38Q6PIJ6 1188 aa28.86■■■□□ 2.21
SOX1-201ENST00000330949 CBX8Q9HC52 389 aa28.86■■■□□ 2.21
SOX1-201ENST00000330949 CAPN2P17655 700 aa28.86■■■□□ 2.21
SOX1-201ENST00000330949 MAP2P11137 1827 aaKnown RBP28.86■■■□□ 2.21
SOX1-201ENST00000330949 RNF20Q5VTR2 975 aa28.85■■■□□ 2.21
SOX1-201ENST00000330949 CLTCQ00610 1675 aaKnown RBP28.85■■■□□ 2.21
SOX1-201ENST00000330949 AK2P54819 239 aa28.85■■■□□ 2.21
SOX1-201ENST00000330949 MCM10Q7L590 875 aa28.85■■■□□ 2.21
SOX1-201ENST00000330949 CACTINQ8WUQ7 758 aaKnown RBP28.85■■■□□ 2.21
SOX1-201ENST00000330949 KIF1BPQ96EK5 621 aa28.85■■■□□ 2.21
SOX1-201ENST00000330949 RTF1Q92541 710 aaKnown RBP28.84■■■□□ 2.21
SOX1-201ENST00000330949 CLIP2Q9UDT6 1046 aa28.84■■■□□ 2.21
SOX1-201ENST00000330949 EXOC6BQ9Y2D4 811 aa28.84■■■□□ 2.21
SOX1-201ENST00000330949 NOL10Q9BSC4 688 aaKnown RBP28.84■■■□□ 2.21
SOX1-201ENST00000330949 MIS18AQ9NYP9 233 aa28.84■■■□□ 2.21
SOX1-201ENST00000330949 MTMR6Q9Y217 621 aa28.84■■■□□ 2.21
SOX1-201ENST00000330949 NEMFO60524 1076 aa28.84■■■□□ 2.21
SOX1-201ENST00000330949 CYP2C19P33261 490 aa28.84■■■□□ 2.21
SOX1-201ENST00000330949 PTPN14Q15678 1187 aa28.84■■■□□ 2.21
SOX1-201ENST00000330949 SULT6B1Q6IMI4 303 aa28.84■■■□□ 2.21
SOX1-201ENST00000330949 TDRD7Q8NHU6 1098 aaKnown RBP28.84■■■□□ 2.21
SOX1-201ENST00000330949 STAP2Q9UGK3 403 aa28.84■■■□□ 2.21
SOX1-201ENST00000330949 RAD50Q92878 1312 aa28.83■■■□□ 2.21
SOX1-201ENST00000330949 ANO6Q4KMQ2 910 aa28.83■■■□□ 2.21
SOX1-201ENST00000330949 RUFY3Q7L099 469 aa28.82■■■□□ 2.2
SOX1-201ENST00000330949 CDC25BP30305 580 aa28.82■■■□□ 2.2
SOX1-201ENST00000330949 BMS1Q14692 1282 aaKnown RBP28.82■■■□□ 2.2
SOX1-201ENST00000330949 TNMDQ9H2S6 317 aa28.82■■■□□ 2.2
SOX1-201ENST00000330949 ELF2Q15723 593 aa28.81■■■□□ 2.2
SOX1-201ENST00000330949 GJB2P29033 226 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms