RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 TBC1D9Q6ZT07 1266 aa19.71■□□□□ 0.75
PGBD2-201ENST00000329291 ZNF496Q96IT1 587 aaPredicted RBP19.71■□□□□ 0.75
PGBD2-201ENST00000329291 STRN4Q9NRL3 753 aa19.71■□□□□ 0.75
PGBD2-201ENST00000329291 SCN11AQ9UI33 1791 aa19.71■□□□□ 0.75
PGBD2-201ENST00000329291 MAP3K2Q9Y2U5 619 aa19.7■□□□□ 0.74
PGBD2-201ENST00000329291 TTC22Q5TAA0 569 aa19.7■□□□□ 0.74
PGBD2-201ENST00000329291 LARP1Q6PKG0 1096 aaKnown RBP19.69■□□□□ 0.74
PGBD2-201ENST00000329291 ZCRB1Q8TBF4 217 aaKnown RBP19.69■□□□□ 0.74
PGBD2-201ENST00000329291 N4BP2Q86UW6 1770 aaPredicted RBP19.68■□□□□ 0.74
PGBD2-201ENST00000329291 IL2RBP14784 551 aa19.68■□□□□ 0.74
PGBD2-201ENST00000329291 KSR2Q6VAB6 950 aa19.68■□□□□ 0.74
PGBD2-201ENST00000329291 DDX21Q9NR30 783 aaKnown RBP eCLIP19.68■□□□□ 0.74
PGBD2-201ENST00000329291 HYPKQ9NX55 129 aa19.68■□□□□ 0.74
PGBD2-201ENST00000329291 PCDH11XQ9BZA7 1347 aa19.68■□□□□ 0.74
PGBD2-201ENST00000329291 PCDH11YQ9BZA8 1340 aa19.68■□□□□ 0.74
PGBD2-201ENST00000329291 AIMP1Q12904 312 aaKnown RBP19.67■□□□□ 0.74
PGBD2-201ENST00000329291 USP16Q9Y5T5 823 aa19.67■□□□□ 0.74
PGBD2-201ENST00000329291 PPP1R42Q7Z4L9 355 aa19.67■□□□□ 0.74
PGBD2-201ENST00000329291 SSH3Q8TE77 659 aa19.67■□□□□ 0.74
PGBD2-201ENST00000329291 COL22A1Q8NFW1 1626 aaPredicted RBP19.66■□□□□ 0.74
PGBD2-201ENST00000329291 CABP4P57796 275 aa19.66■□□□□ 0.74
PGBD2-201ENST00000329291 CWF19L2Q2TBE0 894 aaKnown RBP19.66■□□□□ 0.74
PGBD2-201ENST00000329291 MRC1P22897 1456 aa19.66■□□□□ 0.74
PGBD2-201ENST00000329291 TBC1D2Q9BYX2 928 aa19.66■□□□□ 0.74
PGBD2-201ENST00000329291 IBTKQ9P2D0 1353 aaPredicted RBP19.65■□□□□ 0.74
PGBD2-201ENST00000329291 MYL6BP14649 208 aa19.65■□□□□ 0.74
PGBD2-201ENST00000329291 SDSP20132 328 aa19.65■□□□□ 0.74
PGBD2-201ENST00000329291 PIP4K2AP48426 406 aaPredicted RBP19.65■□□□□ 0.74
PGBD2-201ENST00000329291 BTG4Q9NY30 223 aa19.65■□□□□ 0.74
PGBD2-201ENST00000329291 CDC45O75419 566 aa19.64■□□□□ 0.74
PGBD2-201ENST00000329291 POLA2Q14181 598 aa19.64■□□□□ 0.74
PGBD2-201ENST00000329291 TSHZ3Q63HK5 1081 aa19.64■□□□□ 0.74
PGBD2-201ENST00000329291 LRRCC1Q9C099 1032 aa19.64■□□□□ 0.74
PGBD2-201ENST00000329291 COL14A1Q05707 1796 aaKnown RBP19.64■□□□□ 0.73
PGBD2-201ENST00000329291 PDE1AP54750 535 aa19.64■□□□□ 0.73
PGBD2-201ENST00000329291 SALL3Q9BXA9 1300 aa19.64■□□□□ 0.73
PGBD2-201ENST00000329291 C5P01031 1676 aa19.63■□□□□ 0.73
PGBD2-201ENST00000329291 RBM25P49756 843 aaKnown RBP19.63■□□□□ 0.73
PGBD2-201ENST00000329291 LRP10Q7Z4F1 713 aa19.63■□□□□ 0.73
PGBD2-201ENST00000329291 TTC5Q8N0Z6 440 aa19.63■□□□□ 0.73
PGBD2-201ENST00000329291 TOM1O60784 492 aa19.63■□□□□ 0.73
PGBD2-201ENST00000329291 SNRPA1P09661 255 aaKnown RBP19.63■□□□□ 0.73
PGBD2-201ENST00000329291 BECN1Q14457 450 aa19.62■□□□□ 0.73
PGBD2-201ENST00000329291 DDX54Q8TDD1 881 aaKnown RBP19.62■□□□□ 0.73
PGBD2-201ENST00000329291 XAGE3Q8WTP9 111 aa19.62■□□□□ 0.73
PGBD2-201ENST00000329291 OSBPL3Q9H4L5 887 aa19.62■□□□□ 0.73
PGBD2-201ENST00000329291 PHLPP1O60346 1717 aa19.62■□□□□ 0.73
PGBD2-201ENST00000329291 SRGAP3O43295 1099 aa19.61■□□□□ 0.73
PGBD2-201ENST00000329291 ALDH1L1O75891 902 aa19.61■□□□□ 0.73
PGBD2-201ENST00000329291 FMNL2Q96PY5 1086 aa19.61■□□□□ 0.73
PGBD2-201ENST00000329291 COPS6Q7L5N1 327 aa19.61■□□□□ 0.73
PGBD2-201ENST00000329291 KIF2CQ99661 725 aa19.61■□□□□ 0.73
PGBD2-201ENST00000329291 USP35Q9P2H5 1018 aa19.61■□□□□ 0.73
PGBD2-201ENST00000329291 SURF6O75683 361 aaKnown RBP19.6■□□□□ 0.73
PGBD2-201ENST00000329291 IGKV5-2P06315 115 aa19.6■□□□□ 0.73
PGBD2-201ENST00000329291 NKX1-1Q15270 411 aaPredicted RBP19.6■□□□□ 0.73
PGBD2-201ENST00000329291 LINS1Q8NG48 757 aa19.6■□□□□ 0.73
PGBD2-201ENST00000329291 IL1RAPL2Q9NP60 686 aa19.6■□□□□ 0.73
PGBD2-201ENST00000329291 C9orf78Q9NZ63 289 aaPredicted RBP19.6■□□□□ 0.73
PGBD2-201ENST00000329291 ERVV-2B6SEH9 535 aa19.59■□□□□ 0.73
PGBD2-201ENST00000329291 COL16A1Q07092 1604 aaPredicted RBP19.58■□□□□ 0.73
PGBD2-201ENST00000329291 RIC3Q7Z5B4 369 aa19.58■□□□□ 0.73
PGBD2-201ENST00000329291 KAZALD1Q96I82 304 aa19.58■□□□□ 0.73
PGBD2-201ENST00000329291 DDX58O95786 925 aaKnown RBP19.58■□□□□ 0.72
PGBD2-201ENST00000329291 PIP4K2BP78356 416 aa19.57■□□□□ 0.72
PGBD2-201ENST00000329291 MX1P20591 662 aa19.57■□□□□ 0.72
PGBD2-201ENST00000329291 SUCLG2Q96I99 432 aa19.56■□□□□ 0.72
PGBD2-201ENST00000329291 GLI3P10071 1580 aa19.55■□□□□ 0.72
PGBD2-201ENST00000329291 GRM8O00222 908 aa19.55■□□□□ 0.72
PGBD2-201ENST00000329291 MTX1Q13505 466 aa19.55■□□□□ 0.72
PGBD2-201ENST00000329291 NUTM1Q86Y26 1132 aa19.55■□□□□ 0.72
PGBD2-201ENST00000329291 RHPN1Q8TCX5 695 aa19.55■□□□□ 0.72
PGBD2-201ENST00000329291 SLKQ9H2G2 1235 aaPredicted RBP19.55■□□□□ 0.72
PGBD2-201ENST00000329291 STAP2Q9UGK3 403 aa19.55■□□□□ 0.72
PGBD2-201ENST00000329291 UTYO14607 1347 aa19.55■□□□□ 0.72
PGBD2-201ENST00000329291 SHANK3Q9BYB0 1731 aa19.55■□□□□ 0.72
PGBD2-201ENST00000329291 ANKRD13DQ6ZTN6 518 aa19.55■□□□□ 0.72
PGBD2-201ENST00000329291 SPRYD3Q8NCJ5 442 aa19.55■□□□□ 0.72
PGBD2-201ENST00000329291 ANTXR1Q9H6X2 564 aa19.55■□□□□ 0.72
PGBD2-201ENST00000329291 NEURL1BA8MQ27 555 aa19.54■□□□□ 0.72
PGBD2-201ENST00000329291 NBPF26B4DH59 902 aa19.54■□□□□ 0.72
PGBD2-201ENST00000329291 RAB11FIP3O75154 756 aa19.54■□□□□ 0.72
PGBD2-201ENST00000329291 NBPF14Q5TI25 921 aa19.54■□□□□ 0.72
PGBD2-201ENST00000329291 NBPF10Q6P3W6 841 aaKnown RBP19.54■□□□□ 0.72
PGBD2-201ENST00000329291 NBPF15Q8N660 670 aa19.54■□□□□ 0.72
PGBD2-201ENST00000329291 MYD88Q99836 296 aa19.54■□□□□ 0.72
PGBD2-201ENST00000329291 RBM42Q9BTD8 480 aaKnown RBP19.54■□□□□ 0.72
PGBD2-201ENST00000329291 METTL22Q9BUU2 404 aaPredicted RBP19.54■□□□□ 0.72
PGBD2-201ENST00000329291 NFKBIBQ15653 356 aa19.54■□□□□ 0.72
PGBD2-201ENST00000329291 USP26Q9BXU7 913 aa19.54■□□□□ 0.72
PGBD2-201ENST00000329291 PA2G4Q9UQ80 394 aaKnown RBP19.54■□□□□ 0.72
PGBD2-201ENST00000329291 PTCD1O75127 700 aaKnown RBP19.53■□□□□ 0.72
PGBD2-201ENST00000329291 BICC1Q9H694 974 aaKnown RBP19.53■□□□□ 0.72
PGBD2-201ENST00000329291 ADAMTS2O95450 1211 aa19.52■□□□□ 0.72
PGBD2-201ENST00000329291 JARID2Q92833 1246 aaPredicted RBP19.52■□□□□ 0.72
PGBD2-201ENST00000329291 GCKRQ14397 625 aa19.52■□□□□ 0.72
PGBD2-201ENST00000329291 UNC5CLQ8IV45 518 aa19.52■□□□□ 0.72
PGBD2-201ENST00000329291 UBAP1LF5GYI3 381 aa19.51■□□□□ 0.71
PGBD2-201ENST00000329291 DISP2A7MBM2 1401 aa19.51■□□□□ 0.71
PGBD2-201ENST00000329291 CD2BP2O95400 341 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms