RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 TTC12Q9H892 705 aaPredicted RBP17.55■□□□□ 0.4
SSBP3-201ENST00000326956 RAD50Q92878 1312 aa17.54■□□□□ 0.4
SSBP3-201ENST00000326956 CYB5RLQ6IPT4 315 aa17.54■□□□□ 0.4
SSBP3-201ENST00000326956 IL17RAQ96F46 866 aa17.54■□□□□ 0.4
SSBP3-201ENST00000326956 LARP6Q9BRS8 491 aaKnown RBP17.54■□□□□ 0.4
SSBP3-201ENST00000326956 OVOS2A0A0J9YW53 1432 aa17.54■□□□□ 0.4
SSBP3-201ENST00000326956 OVOS2Q6IE36 1432 aa17.54■□□□□ 0.4
SSBP3-201ENST00000326956 GNAT3A8MTJ3 354 aa17.54■□□□□ 0.4
SSBP3-201ENST00000326956 SGSM2O43147 1006 aa17.54■□□□□ 0.4
SSBP3-201ENST00000326956 AK2P54819 239 aa17.54■□□□□ 0.4
SSBP3-201ENST00000326956 USP44Q9H0E7 712 aa17.54■□□□□ 0.4
SSBP3-201ENST00000326956 SNX14Q9Y5W7 946 aa17.54■□□□□ 0.4
SSBP3-201ENST00000326956 SETD1AO15047 1707 aaKnown RBP17.53■□□□□ 0.4
SSBP3-201ENST00000326956 PLEKHG3A1L390 1219 aa17.53■□□□□ 0.4
SSBP3-201ENST00000326956 SYT1P21579 422 aa17.53■□□□□ 0.4
SSBP3-201ENST00000326956 OS9Q13438 667 aaPredicted RBP17.53■□□□□ 0.4
SSBP3-201ENST00000326956 PPP1R42Q7Z4L9 355 aa17.53■□□□□ 0.4
SSBP3-201ENST00000326956 RHPN1Q8TCX5 695 aa17.53■□□□□ 0.4
SSBP3-201ENST00000326956 AKAP12Q02952 1782 aa17.53■□□□□ 0.4
SSBP3-201ENST00000326956 HTATSF1O43719 755 aaKnown RBP17.53■□□□□ 0.4
SSBP3-201ENST00000326956 IL25Q9H293 177 aa17.53■□□□□ 0.4
SSBP3-201ENST00000326956 FLT4P35916 1363 aa17.53■□□□□ 0.4
SSBP3-201ENST00000326956 F13A1P00488 732 aa17.52■□□□□ 0.4
SSBP3-201ENST00000326956 CWC27Q6UX04 472 aaKnown RBP17.52■□□□□ 0.4
SSBP3-201ENST00000326956 SSH3Q8TE77 659 aa17.52■□□□□ 0.4
SSBP3-201ENST00000326956 KIF1BPQ96EK5 621 aa17.52■□□□□ 0.4
SSBP3-201ENST00000326956 EYA1Q99502 592 aa17.52■□□□□ 0.4
SSBP3-201ENST00000326956 SRGAP3O43295 1099 aa17.52■□□□□ 0.4
SSBP3-201ENST00000326956 HDGFL1Q5TGJ6 251 aa17.52■□□□□ 0.4
SSBP3-201ENST00000326956 DIAPH3Q9NSV4 1193 aa17.51■□□□□ 0.39
SSBP3-201ENST00000326956 RPAP1Q9BWH6 1393 aaPredicted RBP17.51■□□□□ 0.39
SSBP3-201ENST00000326956 USP6P35125 1406 aa17.51■□□□□ 0.39
SSBP3-201ENST00000326956 TCHHQ07283 1943 aa17.51■□□□□ 0.39
SSBP3-201ENST00000326956 KDM4AO75164 1064 aa17.51■□□□□ 0.39
SSBP3-201ENST00000326956 CASTP20810 708 aaKnown RBP17.51■□□□□ 0.39
SSBP3-201ENST00000326956 NGDNQ8NEJ9 315 aaKnown RBP17.51■□□□□ 0.39
SSBP3-201ENST00000326956 CHAF1AQ13111 956 aaPredicted RBP17.51■□□□□ 0.39
SSBP3-201ENST00000326956 RUFY2Q8WXA3 655 aa17.51■□□□□ 0.39
SSBP3-201ENST00000326956 TECPR2O15040 1411 aa17.5■□□□□ 0.39
SSBP3-201ENST00000326956 GIMAP6Q6P9H5 292 aa17.5■□□□□ 0.39
SSBP3-201ENST00000326956 SPG7Q9UQ90 795 aa17.5■□□□□ 0.39
SSBP3-201ENST00000326956 SPATA31D1Q6ZQQ2 1576 aa17.5■□□□□ 0.39
SSBP3-201ENST00000326956 SBNO1A3KN83 1393 aa17.5■□□□□ 0.39
SSBP3-201ENST00000326956 TAF7Q15545 349 aaPredicted RBP17.5■□□□□ 0.39
SSBP3-201ENST00000326956 HSP90AB4PQ58FF6 505 aa17.5■□□□□ 0.39
SSBP3-201ENST00000326956 USP31Q70CQ4 1352 aa17.49■□□□□ 0.39
SSBP3-201ENST00000326956 ROBO2Q9HCK4 1378 aa17.49■□□□□ 0.39
SSBP3-201ENST00000326956 GOLGA6L6A8MZA4 724 aa17.49■□□□□ 0.39
SSBP3-201ENST00000326956 RUFY3Q7L099 469 aa17.49■□□□□ 0.39
SSBP3-201ENST00000326956 CCDC83Q8IWF9 413 aa17.49■□□□□ 0.39
SSBP3-201ENST00000326956 TTC14Q96N46 770 aa17.49■□□□□ 0.39
SSBP3-201ENST00000326956 VPS37CA5D8V6 355 aaPredicted RBP17.49■□□□□ 0.39
SSBP3-201ENST00000326956 FAM69CQ0P6D2 419 aa17.49■□□□□ 0.39
SSBP3-201ENST00000326956 RASEFQ8IZ41 740 aa17.49■□□□□ 0.39
SSBP3-201ENST00000326956 C17orf53Q8N3J3 647 aaPredicted RBP17.49■□□□□ 0.39
SSBP3-201ENST00000326956 LSG1Q9H089 658 aaKnown RBP17.49■□□□□ 0.39
SSBP3-201ENST00000326956 GJB2P29033 226 aa17.48■□□□□ 0.39
SSBP3-201ENST00000326956 PI4K2BQ8TCG2 481 aa17.48■□□□□ 0.39
SSBP3-201ENST00000326956 CCDC94Q9BW85 323 aaPredicted RBP17.48■□□□□ 0.39
SSBP3-201ENST00000326956 PODXL2Q9NZ53 605 aa17.48■□□□□ 0.39
SSBP3-201ENST00000326956 KIF3AQ9Y496 699 aa17.48■□□□□ 0.39
SSBP3-201ENST00000326956 TTC21AQ8NDW8 1320 aa17.48■□□□□ 0.39
SSBP3-201ENST00000326956 TPM3P06753 285 aa17.48■□□□□ 0.39
SSBP3-201ENST00000326956 EIF2S2P20042 333 aaKnown RBP17.48■□□□□ 0.39
SSBP3-201ENST00000326956 IGSF1Q8N6C5 1336 aa17.48■□□□□ 0.39
SSBP3-201ENST00000326956 SMAP1Q8IYB5 467 aaPredicted RBP17.48■□□□□ 0.39
SSBP3-201ENST00000326956 JAKMIP1Q96N16 626 aaKnown RBP17.48■□□□□ 0.39
SSBP3-201ENST00000326956 PDRG1Q9NUG6 133 aa17.48■□□□□ 0.39
SSBP3-201ENST00000326956 NRXN3Q9Y4C0 1643 aa17.47■□□□□ 0.39
SSBP3-201ENST00000326956 CPA1P15085 419 aa17.47■□□□□ 0.39
SSBP3-201ENST00000326956 KCNJ4P48050 445 aa17.47■□□□□ 0.39
SSBP3-201ENST00000326956 DNM1Q05193 864 aaKnown RBP17.47■□□□□ 0.39
SSBP3-201ENST00000326956 ZSCAN31Q96LW9 406 aaPredicted RBP17.47■□□□□ 0.39
SSBP3-201ENST00000326956 PHAXQ9H814 394 aaKnown RBP17.47■□□□□ 0.39
SSBP3-201ENST00000326956 CCDC192P0DO97 292 aa17.47■□□□□ 0.39
SSBP3-201ENST00000326956 CYP46A1Q9Y6A2 500 aa17.47■□□□□ 0.39
SSBP3-201ENST00000326956 KDRP35968 1356 aa17.47■□□□□ 0.39
SSBP3-201ENST00000326956 GLRX3O76003 335 aaKnown RBP17.46■□□□□ 0.39
SSBP3-201ENST00000326956 PEAK1Q9H792 1746 aa17.46■□□□□ 0.39
SSBP3-201ENST00000326956 LTV1Q96GA3 475 aaPredicted RBP17.46■□□□□ 0.39
SSBP3-201ENST00000326956 SH2B1Q9NRF2 756 aaPredicted RBP17.46■□□□□ 0.39
SSBP3-201ENST00000326956 SPC24Q8NBT2 197 aa17.45■□□□□ 0.38
SSBP3-201ENST00000326956 TSC1Q92574 1164 aa17.45■□□□□ 0.38
SSBP3-201ENST00000326956 GPATCH3Q96I76 525 aa17.45■□□□□ 0.38
SSBP3-201ENST00000326956 ZKSCAN1P17029 563 aaPredicted RBP17.45■□□□□ 0.38
SSBP3-201ENST00000326956 POLA2Q14181 598 aa17.45■□□□□ 0.38
SSBP3-201ENST00000326956 CLASRPQ8N2M8 674 aaKnown RBP17.45■□□□□ 0.38
SSBP3-201ENST00000326956 NLRP6P59044 892 aa17.44■□□□□ 0.38
SSBP3-201ENST00000326956 PRPF40BQ6NWY9 871 aaKnown RBP17.44■□□□□ 0.38
SSBP3-201ENST00000326956 RGPD1P0DJD0 1748 aa17.44■□□□□ 0.38
SSBP3-201ENST00000326956 GOLGA6L4A6NEF3 574 aa17.44■□□□□ 0.38
SSBP3-201ENST00000326956 IL17REQ8NFR9 667 aa17.44■□□□□ 0.38
SSBP3-201ENST00000326956 CHMP3Q9Y3E7 222 aa17.44■□□□□ 0.38
SSBP3-201ENST00000326956 MAP3K5Q99683 1374 aa17.44■□□□□ 0.38
SSBP3-201ENST00000326956 VPS53Q5VIR6 699 aa17.44■□□□□ 0.38
SSBP3-201ENST00000326956 CHMP4AQ9BY43 222 aa17.44■□□□□ 0.38
SSBP3-201ENST00000326956 SPTLC3Q9NUV7 552 aa17.44■□□□□ 0.38
SSBP3-201ENST00000326956 BABAM1Q9NWV8 329 aa17.44■□□□□ 0.38
SSBP3-201ENST00000326956 HYPKQ9NX55 129 aa17.44■□□□□ 0.38
SSBP3-201ENST00000326956 MTMR6Q9Y217 621 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms