RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 DNAAF4Q8WXU2 420 aa15.11■□□□□ 0.01
DNMT3A-202ENST00000321117 RNF17Q9BXT8 1623 aaKnown RBP15.11■□□□□ 0.01
DNMT3A-202ENST00000321117 A0A0U1RQG5 324 aaPredicted RBP15.11■□□□□ 0.01
DNMT3A-202ENST00000321117 PSME1Q06323 249 aa15.11■□□□□ 0.01
DNMT3A-202ENST00000321117 FOXO3O43524 673 aa15.1■□□□□ 0.01
DNMT3A-202ENST00000321117 PLEKHO1Q53GL0 409 aaPredicted RBP15.1■□□□□ 0.01
DNMT3A-202ENST00000321117 TAF7LQ5H9L4 462 aa15.1■□□□□ 0.01
DNMT3A-202ENST00000321117 DNAJC2Q99543 621 aaKnown RBP15.1■□□□□ 0.01
DNMT3A-202ENST00000321117 RTL1A6NKG5 1358 aa15.1■□□□□ 0.01
DNMT3A-202ENST00000321117 ECHDC1Q9NTX5 307 aa15.1■□□□□ 0.01
DNMT3A-202ENST00000321117 PIK3R4Q99570 1358 aa15.1■□□□□ 0.01
DNMT3A-202ENST00000321117 EDC4Q6P2E9 1401 aaKnown RBP15.1■□□□□ 0.01
DNMT3A-202ENST00000321117 MTHFSDQ2M296 383 aaKnown RBP15.1■□□□□ 0.01
DNMT3A-202ENST00000321117 KIF2CQ99661 725 aa15.1■□□□□ 0.01
DNMT3A-202ENST00000321117 PODXL2Q9NZ53 605 aa15.1■□□□□ 0.01
DNMT3A-202ENST00000321117 CFAP45Q9UL16 551 aa15.09■□□□□ 0.01
DNMT3A-202ENST00000321117 A0A0G2JS52 829 aa15.09■□□□□ 0.01
DNMT3A-202ENST00000321117 AK2P54819 239 aa15.09■□□□□ 0.01
DNMT3A-202ENST00000321117 DNM1Q05193 864 aaKnown RBP15.09■□□□□ 0.01
DNMT3A-202ENST00000321117 PPP4R3BQ5MIZ7 849 aa15.09■□□□□ 0.01
DNMT3A-202ENST00000321117 NEUROD6Q96NK8 337 aa15.09■□□□□ 0.01
DNMT3A-202ENST00000321117 TFIP11Q9UBB9 837 aaKnown RBP15.09■□□□□ 0.01
DNMT3A-202ENST00000321117 FILIP1Q7Z7B0 1213 aa15.09■□□□□ 0.01
DNMT3A-202ENST00000321117 TTC5Q8N0Z6 440 aa15.09■□□□□ 0.01
DNMT3A-202ENST00000321117 UHRF1BP1LA0JNW5 1464 aa15.08■□□□□ 0.01
DNMT3A-202ENST00000321117 EFCAB6Q5THR3 1501 aa15.08■□□□□ 0.01
DNMT3A-202ENST00000321117 SYT1P21579 422 aa15.08■□□□□ 0
DNMT3A-202ENST00000321117 GADD45BO75293 160 aaPredicted RBP15.08■□□□□ 0
DNMT3A-202ENST00000321117 KRT32Q14532 448 aa15.08■□□□□ 0
DNMT3A-202ENST00000321117 SYNE3Q6ZMZ3 975 aa15.08■□□□□ 0
DNMT3A-202ENST00000321117 C16orf45Q96MC5 204 aaPredicted RBP15.08■□□□□ 0
DNMT3A-202ENST00000321117 ZNF396Q96N95 335 aaPredicted RBP15.08■□□□□ 0
DNMT3A-202ENST00000321117 LRRFIP1Q32MZ4 808 aaKnown RBP15.08■□□□□ 0
DNMT3A-202ENST00000321117 FMNL2Q96PY5 1086 aa15.08■□□□□ 0
DNMT3A-202ENST00000321117 DDX19AQ9NUU7 478 aaKnown RBP15.08■□□□□ 0
DNMT3A-202ENST00000321117 PTCH1Q13635 1447 aa15.07■□□□□ 0
DNMT3A-202ENST00000321117 IQSEC2Q5JU85 1478 aa15.07■□□□□ 0
DNMT3A-202ENST00000321117 BTBD11A6QL63 1104 aa15.07■□□□□ 0
DNMT3A-202ENST00000321117 ZNF853P0CG23 659 aa15.07■□□□□ 0
DNMT3A-202ENST00000321117 ME1P48163 572 aa15.07■□□□□ 0
DNMT3A-202ENST00000321117 NECAB1Q8N987 351 aa15.07■□□□□ 0
DNMT3A-202ENST00000321117 DDX11Q96FC9 970 aa15.07■□□□□ 0
DNMT3A-202ENST00000321117 PI4KAP2A4QPH2 592 aa15.07■□□□□ 0
DNMT3A-202ENST00000321117 PI4KAP1Q8N8J0 262 aa15.07■□□□□ 0
DNMT3A-202ENST00000321117 BOLA2Q9H3K6 86 aa15.07■□□□□ 0
DNMT3A-202ENST00000321117 ZCCHC11Q5TAX3 1644 aaKnown RBP15.07■□□□□ 0
DNMT3A-202ENST00000321117 SOS1Q07889 1333 aaPredicted RBP15.07■□□□□ 0
DNMT3A-202ENST00000321117 NPHP1O15259 732 aa15.07■□□□□ 0
DNMT3A-202ENST00000321117 CPLX2Q6PUV4 134 aaKnown RBP15.07■□□□□ 0
DNMT3A-202ENST00000321117 POGZQ7Z3K3 1410 aa15.07■□□□□ 0
DNMT3A-202ENST00000321117 KDM4AO75164 1064 aa15.06■□□□□ 0
DNMT3A-202ENST00000321117 SMC2O95347 1197 aa15.06■□□□□ 0
DNMT3A-202ENST00000321117 EVI5LQ96CN4 794 aa15.06■□□□□ 0
DNMT3A-202ENST00000321117 CCDC34Q96HJ3 373 aa15.06■□□□□ 0
DNMT3A-202ENST00000321117 NLRP1Q9C000 1473 aa15.06■□□□□ 0
DNMT3A-202ENST00000321117 USHBP1Q8N6Y0 703 aa15.06■□□□□ 0
DNMT3A-202ENST00000321117 MNS1Q8NEH6 495 aa15.06■□□□□ 0
DNMT3A-202ENST00000321117 FAM200AQ8TCP9 573 aa15.06■□□□□ 0
DNMT3A-202ENST00000321117 ZHX1Q9UKY1 873 aaPredicted RBP15.06■□□□□ 0
DNMT3A-202ENST00000321117 TNNT1P13805 278 aa15.06■□□□□ 0
DNMT3A-202ENST00000321117 PALD1Q9ULE6 856 aa15.06■□□□□ 0
DNMT3A-202ENST00000321117 KIAA0232Q92628 1395 aa15.06■□□□□ 0
DNMT3A-202ENST00000321117 PNMA6EA0A0J9YXQ4 647 aa15.06■□□□□ 0
DNMT3A-202ENST00000321117 CCDC8Q9H0W5 538 aaPredicted RBP15.06■□□□□ 0
DNMT3A-202ENST00000321117 ZNF165P49910 485 aa15.05■□□□□ 0
DNMT3A-202ENST00000321117 CLIP2Q9UDT6 1046 aa15.05■□□□□ 0
DNMT3A-202ENST00000321117 CEP152O94986 1710 aa15.05■□□□□ -0
DNMT3A-202ENST00000321117 CLEC17AQ6ZS10 378 aa15.05■□□□□ -0
DNMT3A-202ENST00000321117 CCAR2Q8N163 923 aaKnown RBP15.05■□□□□ -0
DNMT3A-202ENST00000321117 PIBF1Q8WXW3 757 aa15.05■□□□□ -0
DNMT3A-202ENST00000321117 CCDC94Q9BW85 323 aaPredicted RBP15.05■□□□□ -0
DNMT3A-202ENST00000321117 ARGLU1Q9NWB6 273 aaPredicted RBP15.05■□□□□ -0
DNMT3A-202ENST00000321117 FAM135BQ49AJ0 1406 aa15.05■□□□□ -0
DNMT3A-202ENST00000321117 CEP57L1Q8IYX8 460 aa15.05■□□□□ -0
DNMT3A-202ENST00000321117 STK38Q15208 465 aa15.04■□□□□ -0
DNMT3A-202ENST00000321117 ERCC6L2Q5T890 1561 aa15.04■□□□□ -0
DNMT3A-202ENST00000321117 SPDYE4A6NLX3 237 aa15.04■□□□□ -0
DNMT3A-202ENST00000321117 ANXA1P04083 346 aa15.03■□□□□ -0
DNMT3A-202ENST00000321117 MYRIPQ8NFW9 859 aa15.03■□□□□ -0
DNMT3A-202ENST00000321117 CPA1P15085 419 aa15.03■□□□□ -0
DNMT3A-202ENST00000321117 CCDC186Q7Z3E2 898 aa15.03■□□□□ -0
DNMT3A-202ENST00000321117 RAPGEF4Q8WZA2 1011 aa15.03■□□□□ -0
DNMT3A-202ENST00000321117 PTPN14Q15678 1187 aa15.03■□□□□ -0
DNMT3A-202ENST00000321117 RALYLQ86SE5 291 aaKnown RBP15.03■□□□□ -0
DNMT3A-202ENST00000321117 TCEANC2Q96MN5 208 aa15.03■□□□□ -0
DNMT3A-202ENST00000321117 QRICH2Q9H0J4 1663 aa15.03■□□□□ -0
DNMT3A-202ENST00000321117 C17orf53Q8N3J3 647 aaPredicted RBP15.03■□□□□ -0
DNMT3A-202ENST00000321117 DBF4Q9UBU7 674 aaPredicted RBP15.03■□□□□ -0
DNMT3A-202ENST00000321117 RBM8AQ9Y5S9 174 aaKnown RBP15.03■□□□□ -0
DNMT3A-202ENST00000321117 TRDNQ13061 729 aa15.02■□□□□ -0
DNMT3A-202ENST00000321117 TEX35Q5T0J7 233 aa15.02■□□□□ -0
DNMT3A-202ENST00000321117 DACT1Q9NYF0 836 aa15.02■□□□□ -0
DNMT3A-202ENST00000321117 DDIT3P35638 169 aa15.02□□□□□ -0.01
DNMT3A-202ENST00000321117 OSBPL3Q9H4L5 887 aa15.02□□□□□ -0.01
DNMT3A-202ENST00000321117 SNX14Q9Y5W7 946 aa15.02□□□□□ -0.01
DNMT3A-202ENST00000321117 SGSM2O43147 1006 aa15.02□□□□□ -0.01
DNMT3A-202ENST00000321117 TRIM29Q14134 588 aa15.02□□□□□ -0.01
DNMT3A-202ENST00000321117 TOMM22Q9NS69 142 aa15.02□□□□□ -0.01
DNMT3A-202ENST00000321117 FAM177BA6PVY3 158 aa15.01□□□□□ -0.01
DNMT3A-202ENST00000321117 HSPA4P34932 840 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms