RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 CAMK4Q16566 473 aa9.45□□□□□ -0.9
RTL3-201ENST00000321110 MUM1L1Q5H9M0 696 aa9.45□□□□□ -0.9
RTL3-201ENST00000321110 LRRN4CLQ8ND94 238 aa9.45□□□□□ -0.9
RTL3-201ENST00000321110 OSBPL3Q9H4L5 887 aa9.45□□□□□ -0.9
RTL3-201ENST00000321110 POLKQ9UBT6 870 aa9.45□□□□□ -0.9
RTL3-201ENST00000321110 LCMT1Q9UIC8 334 aa9.45□□□□□ -0.9
RTL3-201ENST00000321110 RAD50Q92878 1312 aa9.45□□□□□ -0.9
RTL3-201ENST00000321110 EFCAB6Q5THR3 1501 aa9.45□□□□□ -0.9
RTL3-201ENST00000321110 KIF24Q5T7B8 1368 aa9.45□□□□□ -0.9
RTL3-201ENST00000321110 KIF3BO15066 747 aa9.45□□□□□ -0.9
RTL3-201ENST00000321110 DHX16O60231 1041 aaKnown RBP9.45□□□□□ -0.9
RTL3-201ENST00000321110 PNMA6AP0CW24 399 aaPredicted RBP9.45□□□□□ -0.9
RTL3-201ENST00000321110 CLCN6P51797 869 aa9.45□□□□□ -0.9
RTL3-201ENST00000321110 PTPN14Q15678 1187 aa9.45□□□□□ -0.9
RTL3-201ENST00000321110 TWISTNBQ3B726 338 aaPredicted RBP9.45□□□□□ -0.9
RTL3-201ENST00000321110 ANO6Q4KMQ2 910 aa9.45□□□□□ -0.9
RTL3-201ENST00000321110 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.45□□□□□ -0.9
RTL3-201ENST00000321110 RPAP2Q8IXW5 612 aaPredicted RBP9.45□□□□□ -0.9
RTL3-201ENST00000321110 C8orf58Q8NAV2 365 aa9.45□□□□□ -0.9
RTL3-201ENST00000321110 LARP6Q9BRS8 491 aaKnown RBP9.45□□□□□ -0.9
RTL3-201ENST00000321110 GGNBP2Q9H3C7 697 aa9.45□□□□□ -0.9
RTL3-201ENST00000321110 MBIPQ9NS73 344 aa9.45□□□□□ -0.9
RTL3-201ENST00000321110 GEMIN8Q9NWZ8 242 aaKnown RBP9.45□□□□□ -0.9
RTL3-201ENST00000321110 CLIP2Q9UDT6 1046 aa9.45□□□□□ -0.9
RTL3-201ENST00000321110 FANCAO15360 1455 aa9.45□□□□□ -0.9
RTL3-201ENST00000321110 CCDC171Q6TFL3 1326 aa9.45□□□□□ -0.9
RTL3-201ENST00000321110 MMP14P50281 582 aa9.44□□□□□ -0.9
RTL3-201ENST00000321110 GYS2P54840 703 aa9.44□□□□□ -0.9
RTL3-201ENST00000321110 ERCC6LQ2NKX8 1250 aa9.44□□□□□ -0.9
RTL3-201ENST00000321110 ZC3H13Q5T200 1668 aaKnown RBP9.44□□□□□ -0.9
RTL3-201ENST00000321110 NRXN1Q9ULB1 1477 aa9.44□□□□□ -0.9
RTL3-201ENST00000321110 LIG1P18858 919 aa9.44□□□□□ -0.9
RTL3-201ENST00000321110 ST5P78524 1137 aa9.44□□□□□ -0.9
RTL3-201ENST00000321110 MAP3K11Q16584 847 aa9.44□□□□□ -0.9
RTL3-201ENST00000321110 KRBA2Q6ZNG9 492 aa9.44□□□□□ -0.9
RTL3-201ENST00000321110 LRRC8AQ8IWT6 810 aa9.44□□□□□ -0.9
RTL3-201ENST00000321110 CKAP2LQ8IYA6 745 aa9.44□□□□□ -0.9
RTL3-201ENST00000321110 IL25Q9H293 177 aa9.44□□□□□ -0.9
RTL3-201ENST00000321110 RNF216Q9NWF9 866 aaPredicted RBP9.44□□□□□ -0.9
RTL3-201ENST00000321110 EXOC6BQ9Y2D4 811 aa9.44□□□□□ -0.9
RTL3-201ENST00000321110 CHMP3Q9Y3E7 222 aa9.44□□□□□ -0.9
RTL3-201ENST00000321110 FAM135BQ49AJ0 1406 aa9.43□□□□□ -0.9
RTL3-201ENST00000321110 DIAPH1O60610 1272 aaKnown RBP9.43□□□□□ -0.9
RTL3-201ENST00000321110 CHMLP26374 656 aa9.43□□□□□ -0.9
RTL3-201ENST00000321110 TDRD7Q8NHU6 1098 aaKnown RBP9.43□□□□□ -0.9
RTL3-201ENST00000321110 NUP62CLQ9H1M0 184 aa9.43□□□□□ -0.9
RTL3-201ENST00000321110 TRMT1Q9NXH9 659 aaKnown RBP9.43□□□□□ -0.9
RTL3-201ENST00000321110 LRRC7Q96NW7 1537 aa9.43□□□□□ -0.9
RTL3-201ENST00000321110 SETBP1Q9Y6X0 1596 aa9.43□□□□□ -0.9
RTL3-201ENST00000321110 MYO1CO00159 1063 aa9.43□□□□□ -0.9
RTL3-201ENST00000321110 POLR3GO15318 223 aaPredicted RBP9.43□□□□□ -0.9
RTL3-201ENST00000321110 ZNF853P0CG23 659 aa9.43□□□□□ -0.9
RTL3-201ENST00000321110 PRKAR2BP31323 418 aa9.43□□□□□ -0.9
RTL3-201ENST00000321110 C10orf67Q8IYJ2 551 aa9.43□□□□□ -0.9
RTL3-201ENST00000321110 SMARCE1Q969G3 411 aa9.43□□□□□ -0.9
RTL3-201ENST00000321110 PHACTR3Q96KR7 559 aa9.43□□□□□ -0.9
RTL3-201ENST00000321110 ATG3Q9NT62 314 aa9.43□□□□□ -0.9
RTL3-201ENST00000321110 ATP6V1DQ9Y5K8 247 aa9.43□□□□□ -0.9
RTL3-201ENST00000321110 QRICH2Q9H0J4 1663 aa9.42□□□□□ -0.9
RTL3-201ENST00000321110 MEIS3Q99687 375 aa9.42□□□□□ -0.9
RTL3-201ENST00000321110 MTMR6Q9Y217 621 aa9.42□□□□□ -0.9
RTL3-201ENST00000321110 AATKQ6ZMQ8 1374 aa9.42□□□□□ -0.9
RTL3-201ENST00000321110 LOC102724159A0A0B4J2E5 919 aa9.42□□□□□ -0.9
RTL3-201ENST00000321110 ZRANB2O95218 330 aaKnown RBP eCLIP9.42□□□□□ -0.9
RTL3-201ENST00000321110 SKILP12757 684 aa9.42□□□□□ -0.9
RTL3-201ENST00000321110 PWP2Q15269 919 aaKnown RBP9.42□□□□□ -0.9
RTL3-201ENST00000321110 RNF20Q5VTR2 975 aa9.42□□□□□ -0.9
RTL3-201ENST00000321110 TMEM132EQ6IEE7 984 aa9.42□□□□□ -0.9
RTL3-201ENST00000321110 RUFY3Q7L099 469 aa9.42□□□□□ -0.9
RTL3-201ENST00000321110 TTC6Q86TZ1 520 aa9.42□□□□□ -0.9
RTL3-201ENST00000321110 TXLNBQ8N3L3 684 aa9.42□□□□□ -0.9
RTL3-201ENST00000321110 SALL3Q9BXA9 1300 aa9.42□□□□□ -0.9
RTL3-201ENST00000321110 MSH6P52701 1360 aa9.42□□□□□ -0.9
RTL3-201ENST00000321110 ADGRB3O60242 1522 aa9.41□□□□□ -0.9
RTL3-201ENST00000321110 FCHSD2O94868 740 aa9.41□□□□□ -0.9
RTL3-201ENST00000321110 CASQ1P31415 396 aa9.41□□□□□ -0.9
RTL3-201ENST00000321110 PSEN1P49768 467 aa9.41□□□□□ -0.9
RTL3-201ENST00000321110 AK2P54819 239 aa9.41□□□□□ -0.9
RTL3-201ENST00000321110 GNAI1P63096 354 aa9.41□□□□□ -0.9
RTL3-201ENST00000321110 SSH2Q76I76 1423 aa9.41□□□□□ -0.9
RTL3-201ENST00000321110 CCAR2Q8N163 923 aaKnown RBP9.41□□□□□ -0.9
RTL3-201ENST00000321110 SIRT1Q96EB6 747 aa9.41□□□□□ -0.9
RTL3-201ENST00000321110 TTC14Q96N46 770 aa9.41□□□□□ -0.9
RTL3-201ENST00000321110 SLC52A1Q9NWF4 448 aa9.41□□□□□ -0.9
RTL3-201ENST00000321110 SMC3Q9UQE7 1217 aa9.41□□□□□ -0.9
RTL3-201ENST00000321110 LRRFIP2Q9Y608 721 aaKnown RBP9.41□□□□□ -0.9
RTL3-201ENST00000321110 LARGE1O95461 756 aa9.41□□□□□ -0.9
RTL3-201ENST00000321110 HSPA4P34932 840 aa9.41□□□□□ -0.9
RTL3-201ENST00000321110 GTF2A1P52655 376 aaPredicted RBP9.41□□□□□ -0.9
RTL3-201ENST00000321110 CCZ1BP86790 482 aa9.41□□□□□ -0.9
RTL3-201ENST00000321110 CCZ1P86791 482 aaPredicted RBP9.41□□□□□ -0.9
RTL3-201ENST00000321110 L2HGDHQ9H9P8 463 aa9.41□□□□□ -0.9
RTL3-201ENST00000321110 ZCCHC17Q9NP64 241 aaKnown RBP9.41□□□□□ -0.9
RTL3-201ENST00000321110 KIDINS220Q9ULH0 1771 aa9.41□□□□□ -0.9
RTL3-201ENST00000321110 PNPLA6Q8IY17 1366 aa9.4□□□□□ -0.9
RTL3-201ENST00000321110 HTATSF1O43719 755 aaKnown RBP9.4□□□□□ -0.9
RTL3-201ENST00000321110 CDC25BP30305 580 aa9.4□□□□□ -0.9
RTL3-201ENST00000321110 FAM69CQ0P6D2 419 aa9.4□□□□□ -0.9
RTL3-201ENST00000321110 NFE2L2Q16236 605 aa9.4□□□□□ -0.9
RTL3-201ENST00000321110 ZSCAN26Q16670 478 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms