RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 VSIG10Q8N0Z9 540 aa19.29■□□□□ 0.68
RPP40-201ENST00000319533 VIRMAQ69YN4 1812 aaKnown RBP19.28■□□□□ 0.68
RPP40-201ENST00000319533 DIAPH1O60610 1272 aaKnown RBP19.28■□□□□ 0.68
RPP40-201ENST00000319533 TOMM70O94826 608 aa19.28■□□□□ 0.68
RPP40-201ENST00000319533 SLC39A6Q13433 755 aa19.28■□□□□ 0.68
RPP40-201ENST00000319533 DALRD3Q5D0E6 543 aaKnown RBP19.28■□□□□ 0.68
RPP40-201ENST00000319533 USPL1Q5W0Q7 1092 aa19.28■□□□□ 0.68
RPP40-201ENST00000319533 NPC1L1Q9UHC9 1359 aa19.28■□□□□ 0.68
RPP40-201ENST00000319533 ZPR1O75312 459 aa19.27■□□□□ 0.68
RPP40-201ENST00000319533 NARFQ9UHQ1 456 aa19.27■□□□□ 0.68
RPP40-201ENST00000319533 C9orf131Q5VYM1 1079 aa19.26■□□□□ 0.67
RPP40-201ENST00000319533 UBR2Q8IWV8 1755 aa19.26■□□□□ 0.67
RPP40-201ENST00000319533 NRXN2Q9P2S2 1712 aa19.25■□□□□ 0.67
RPP40-201ENST00000319533 COL3A1P02461 1466 aaPredicted RBP19.25■□□□□ 0.67
RPP40-201ENST00000319533 COL15A1P39059 1388 aa19.25■□□□□ 0.67
RPP40-201ENST00000319533 CHRNA5P30532 468 aa19.25■□□□□ 0.67
RPP40-201ENST00000319533 IFFO2Q5TF58 517 aa19.25■□□□□ 0.67
RPP40-201ENST00000319533 ZBTB1Q9Y2K1 713 aa19.25■□□□□ 0.67
RPP40-201ENST00000319533 NFIXQ14938 502 aa19.24■□□□□ 0.67
RPP40-201ENST00000319533 CC2D1BQ5T0F9 858 aaKnown RBP19.24■□□□□ 0.67
RPP40-201ENST00000319533 BCL2L12Q9HB09 334 aa19.24■□□□□ 0.67
RPP40-201ENST00000319533 NMRK2Q9NPI5 230 aa19.24■□□□□ 0.67
RPP40-201ENST00000319533 APLP1P51693 650 aa19.23■□□□□ 0.67
RPP40-201ENST00000319533 AFDNP55196 1824 aaKnown RBP19.22■□□□□ 0.67
RPP40-201ENST00000319533 RBM46Q8TBY0 533 aaKnown RBP19.21■□□□□ 0.67
RPP40-201ENST00000319533 SBF1O95248 1867 aa19.2■□□□□ 0.66
RPP40-201ENST00000319533 EIF5P55010 431 aaKnown RBP19.2■□□□□ 0.66
RPP40-201ENST00000319533 DNAJC5GQ8N7S2 189 aa19.2■□□□□ 0.66
RPP40-201ENST00000319533 IL17REQ8NFR9 667 aa19.2■□□□□ 0.66
RPP40-201ENST00000319533 STARD3NLO95772 234 aa19.19■□□□□ 0.66
RPP40-201ENST00000319533 SERPINB2P05120 415 aa19.19■□□□□ 0.66
RPP40-201ENST00000319533 RNF181Q9P0P0 153 aa19.19■□□□□ 0.66
RPP40-201ENST00000319533 DLEC1Q9Y238 1755 aa19.19■□□□□ 0.66
RPP40-201ENST00000319533 GNAT3A8MTJ3 354 aa19.18■□□□□ 0.66
RPP40-201ENST00000319533 TTC5Q8N0Z6 440 aa19.18■□□□□ 0.66
RPP40-201ENST00000319533 GAS2L2Q8NHY3 880 aa19.18■□□□□ 0.66
RPP40-201ENST00000319533 KDM2BQ8NHM5 1336 aa19.18■□□□□ 0.66
RPP40-201ENST00000319533 ZC3H4Q9UPT8 1303 aaKnown RBP19.18■□□□□ 0.66
RPP40-201ENST00000319533 SIPA1L3O60292 1781 aaPredicted RBP19.17■□□□□ 0.66
RPP40-201ENST00000319533 A0A087WZG4 1122 aa19.17■□□□□ 0.66
RPP40-201ENST00000319533 CANXP27824 592 aaKnown RBP19.17■□□□□ 0.66
RPP40-201ENST00000319533 ZNF790Q6PG37 636 aa19.17■□□□□ 0.66
RPP40-201ENST00000319533 ZNF496Q96IT1 587 aaPredicted RBP19.17■□□□□ 0.66
RPP40-201ENST00000319533 TEX13AQ9BXU3 409 aaPredicted RBP19.17■□□□□ 0.66
RPP40-201ENST00000319533 HEG1Q9ULI3 1381 aa19.17■□□□□ 0.66
RPP40-201ENST00000319533 FSTL1Q12841 308 aa19.16■□□□□ 0.66
RPP40-201ENST00000319533 CEMIPQ8WUJ3 1361 aa19.16■□□□□ 0.66
RPP40-201ENST00000319533 U2SURPO15042 1029 aaKnown RBP19.15■□□□□ 0.66
RPP40-201ENST00000319533 TEFQ10587 303 aa19.15■□□□□ 0.66
RPP40-201ENST00000319533 TTLL6Q8N841 843 aa19.15■□□□□ 0.66
RPP40-201ENST00000319533 CARMIL3Q8ND23 1372 aa19.14■□□□□ 0.65
RPP40-201ENST00000319533 TNRC6CQ9HCJ0 1690 aaKnown RBP19.14■□□□□ 0.65
RPP40-201ENST00000319533 LMNB1P20700 586 aa19.13■□□□□ 0.65
RPP40-201ENST00000319533 IL6STP40189 918 aaPredicted RBP19.13■□□□□ 0.65
RPP40-201ENST00000319533 PRELPP51888 382 aa19.13■□□□□ 0.65
RPP40-201ENST00000319533 RASSF7Q02833 373 aa19.13■□□□□ 0.65
RPP40-201ENST00000319533 C2CD5Q86YS7 1000 aa19.13■□□□□ 0.65
RPP40-201ENST00000319533 C16orf71Q8IYS4 520 aaPredicted RBP19.13■□□□□ 0.65
RPP40-201ENST00000319533 SCN7AQ01118 1682 aa19.13■□□□□ 0.65
RPP40-201ENST00000319533 WDR90Q96KV7 1748 aa19.12■□□□□ 0.65
RPP40-201ENST00000319533 H0YIN7 160 aa19.12■□□□□ 0.65
RPP40-201ENST00000319533 TBC1D9BQ66K14 1250 aa19.12■□□□□ 0.65
RPP40-201ENST00000319533 RRAGCQ9HB90 399 aa19.12■□□□□ 0.65
RPP40-201ENST00000319533 PDZRN3Q9UPQ7 1066 aa19.12■□□□□ 0.65
RPP40-201ENST00000319533 PHACTR3Q96KR7 559 aa19.11■□□□□ 0.65
RPP40-201ENST00000319533 FMNL2Q96PY5 1086 aa19.11■□□□□ 0.65
RPP40-201ENST00000319533 RSPH6AQ9H0K4 717 aa19.11■□□□□ 0.65
RPP40-201ENST00000319533 ANKRD31Q8N7Z5 1873 aa19.1■□□□□ 0.65
RPP40-201ENST00000319533 BRIP1Q9BX63 1249 aa19.1■□□□□ 0.65
RPP40-201ENST00000319533 GLTPD2A6NH11 291 aa19.09■□□□□ 0.65
RPP40-201ENST00000319533 NFKBIEO00221 500 aa19.09■□□□□ 0.65
RPP40-201ENST00000319533 PRR5LQ6MZQ0 368 aa19.09■□□□□ 0.65
RPP40-201ENST00000319533 BICDL1Q6ZP65 573 aa19.09■□□□□ 0.65
RPP40-201ENST00000319533 TBC1D2BQ9UPU7 963 aa19.09■□□□□ 0.65
RPP40-201ENST00000319533 CAMTA2O94983 1202 aa19.08■□□□□ 0.64
RPP40-201ENST00000319533 A1BGP04217 495 aa19.08■□□□□ 0.64
RPP40-201ENST00000319533 PRKAR2BP31323 418 aa19.08■□□□□ 0.64
RPP40-201ENST00000319533 PDE6BP35913 854 aa19.08■□□□□ 0.64
RPP40-201ENST00000319533 BTBD11A6QL63 1104 aa19.07■□□□□ 0.64
RPP40-201ENST00000319533 KCNQ3O43525 872 aa19.07■□□□□ 0.64
RPP40-201ENST00000319533 CFAP53Q96M91 514 aa19.07■□□□□ 0.64
RPP40-201ENST00000319533 CNGB1Q14028 1251 aaPredicted RBP19.06■□□□□ 0.64
RPP40-201ENST00000319533 JMYQ8N9B5 988 aa19.06■□□□□ 0.64
RPP40-201ENST00000319533 SMC1BQ8NDV3 1235 aa19.06■□□□□ 0.64
RPP40-201ENST00000319533 KLRG1Q96E93 195 aa19.06■□□□□ 0.64
RPP40-201ENST00000319533 COL11A2P13942 1736 aaPredicted RBP19.05■□□□□ 0.64
RPP40-201ENST00000319533 VEGFAP15692 232 aaPredicted RBP19.05■□□□□ 0.64
RPP40-201ENST00000319533 NUDCQ9Y266 331 aa19.05■□□□□ 0.64
RPP40-201ENST00000319533 TIAM2Q8IVF5 1701 aa19.05■□□□□ 0.64
RPP40-201ENST00000319533 BCORQ6W2J9 1755 aa19.04■□□□□ 0.64
RPP40-201ENST00000319533 HTRA3P83110 453 aa19.04■□□□□ 0.64
RPP40-201ENST00000319533 CCDC88AQ3V6T2 1871 aa19.04■□□□□ 0.64
RPP40-201ENST00000319533 ZNF622Q969S3 477 aaKnown RBP eCLIP19.04■□□□□ 0.64
RPP40-201ENST00000319533 SETDB2Q96T68 719 aa19.04■□□□□ 0.64
RPP40-201ENST00000319533 USP16Q9Y5T5 823 aa19.04■□□□□ 0.64
RPP40-201ENST00000319533 LTBP3Q9NS15 1303 aa19.03■□□□□ 0.64
RPP40-201ENST00000319533 FER1L6Q2WGJ9 1857 aa19.03■□□□□ 0.64
RPP40-201ENST00000319533 PPP2R1AP30153 589 aa19.03■□□□□ 0.64
RPP40-201ENST00000319533 CLEC4GQ6UXB4 293 aa19.03■□□□□ 0.64
RPP40-201ENST00000319533 DZIP3Q86Y13 1208 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms