RNA–Protein interactions for RNA: ENST00000319170.9

RAPH1-202, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPH1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-202ENST00000319170 EXOC6BQ9Y2D4 811 aa16.37■□□□□ 0.21
RAPH1-202ENST00000319170 STARD3NLO95772 234 aa16.37■□□□□ 0.21
RAPH1-202ENST00000319170 COMMD10Q9Y6G5 202 aa16.37■□□□□ 0.21
RAPH1-202ENST00000319170 KIAA1107Q9UPP5 1409 aa16.37■□□□□ 0.21
RAPH1-202ENST00000319170 USO1O60763 962 aaKnown RBP16.37■□□□□ 0.21
RAPH1-202ENST00000319170 MX1P20591 662 aa16.37■□□□□ 0.21
RAPH1-202ENST00000319170 TAOK3Q9H2K8 898 aa16.37■□□□□ 0.21
RAPH1-202ENST00000319170 LIG1P18858 919 aa16.37■□□□□ 0.21
RAPH1-202ENST00000319170 NBPF1Q3BBV0 1214 aa16.37■□□□□ 0.21
RAPH1-202ENST00000319170 TRMT1Q9NXH9 659 aaKnown RBP16.37■□□□□ 0.21
RAPH1-202ENST00000319170 A0A087WZG4 1122 aa16.36■□□□□ 0.21
RAPH1-202ENST00000319170 PODXL2Q9NZ53 605 aa16.36■□□□□ 0.21
RAPH1-202ENST00000319170 ZNF652Q9Y2D9 606 aa16.36■□□□□ 0.21
RAPH1-202ENST00000319170 PTPN23Q9H3S7 1636 aa16.36■□□□□ 0.21
RAPH1-202ENST00000319170 GIGYF2Q6Y7W6 1299 aaKnown RBP16.36■□□□□ 0.21
RAPH1-202ENST00000319170 EFCAB5A4FU69 1503 aa16.36■□□□□ 0.21
RAPH1-202ENST00000319170 ZPR1O75312 459 aa16.36■□□□□ 0.21
RAPH1-202ENST00000319170 TDRD12Q587J7 1177 aaKnown RBP16.36■□□□□ 0.21
RAPH1-202ENST00000319170 PLEKHH2Q8IVE3 1493 aa16.36■□□□□ 0.21
RAPH1-202ENST00000319170 RANBP6O60518 1105 aaKnown RBP16.36■□□□□ 0.21
RAPH1-202ENST00000319170 YEATS4O95619 227 aa16.36■□□□□ 0.21
RAPH1-202ENST00000319170 KIF1BPQ96EK5 621 aa16.36■□□□□ 0.21
RAPH1-202ENST00000319170 NKTRP30414 1462 aaKnown RBP16.35■□□□□ 0.21
RAPH1-202ENST00000319170 EHMT1Q9H9B1 1298 aa16.35■□□□□ 0.21
RAPH1-202ENST00000319170 PIP4K2BP78356 416 aa16.35■□□□□ 0.21
RAPH1-202ENST00000319170 C16orf45Q96MC5 204 aaPredicted RBP16.35■□□□□ 0.21
RAPH1-202ENST00000319170 RAB34Q9BZG1 259 aa16.35■□□□□ 0.21
RAPH1-202ENST00000319170 CCDC196A0A1B0GTZ2 297 aa16.35■□□□□ 0.21
RAPH1-202ENST00000319170 MYCNP04198 464 aaPredicted RBP16.35■□□□□ 0.21
RAPH1-202ENST00000319170 XPCQ01831 940 aaPredicted RBP16.35■□□□□ 0.21
RAPH1-202ENST00000319170 HLTFQ14527 1009 aaKnown RBP eCLIP16.35■□□□□ 0.21
RAPH1-202ENST00000319170 GOLGA8BA8MQT2 603 aa16.35■□□□□ 0.21
RAPH1-202ENST00000319170 CNNM3Q8NE01 707 aa16.35■□□□□ 0.21
RAPH1-202ENST00000319170 BOLA2Q9H3K6 86 aa16.35■□□□□ 0.21
RAPH1-202ENST00000319170 CCDC175P0C221 793 aa16.34■□□□□ 0.21
RAPH1-202ENST00000319170 GRIPAP1Q4V328 841 aa16.34■□□□□ 0.21
RAPH1-202ENST00000319170 CPLX3Q8WVH0 158 aa16.34■□□□□ 0.21
RAPH1-202ENST00000319170 PUS7Q96PZ0 661 aaKnown RBP16.34■□□□□ 0.21
RAPH1-202ENST00000319170 KIF14Q15058 1648 aa16.34■□□□□ 0.21
RAPH1-202ENST00000319170 HFM1A2PYH4 1435 aa16.34■□□□□ 0.21
RAPH1-202ENST00000319170 TIAM1Q13009 1591 aa16.34■□□□□ 0.21
RAPH1-202ENST00000319170 PRPF4BQ13523 1007 aaKnown RBP16.34■□□□□ 0.21
RAPH1-202ENST00000319170 STX1AQ16623 288 aa16.34■□□□□ 0.21
RAPH1-202ENST00000319170 DRC1Q96MC2 740 aa16.34■□□□□ 0.21
RAPH1-202ENST00000319170 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
RAPH1-202ENST00000319170 SH2B1Q9NRF2 756 aaPredicted RBP16.34■□□□□ 0.21
RAPH1-202ENST00000319170 ANKRD18BA2A2Z9 1011 aa16.34■□□□□ 0.21
RAPH1-202ENST00000319170 PAFAH1B1P43034 410 aa16.34■□□□□ 0.21
RAPH1-202ENST00000319170 SPTY2D1Q68D10 685 aaPredicted RBP16.34■□□□□ 0.21
RAPH1-202ENST00000319170 ZFP91Q96JP5 570 aaPredicted RBP16.34■□□□□ 0.21
RAPH1-202ENST00000319170 CKAP2LQ8IYA6 745 aa16.33■□□□□ 0.21
RAPH1-202ENST00000319170 MAATS1Q7Z4T9 603 aa16.33■□□□□ 0.2
RAPH1-202ENST00000319170 CCDC82Q8N4S0 544 aa16.33■□□□□ 0.2
RAPH1-202ENST00000319170 TMC6Q7Z403 805 aa16.33■□□□□ 0.2
RAPH1-202ENST00000319170 SCAND2PQ9GZW5 306 aaPredicted RBP16.33■□□□□ 0.2
RAPH1-202ENST00000319170 CTCFLQ8NI51 663 aaPredicted RBP16.33■□□□□ 0.2
RAPH1-202ENST00000319170 AQRO60306 1485 aaKnown RBP eCLIP16.33■□□□□ 0.2
RAPH1-202ENST00000319170 CTAGE5O15320 804 aa16.33■□□□□ 0.2
RAPH1-202ENST00000319170 MYD88Q99836 296 aa16.33■□□□□ 0.2
RAPH1-202ENST00000319170 CATIPQ7Z7H3 387 aa16.32■□□□□ 0.2
RAPH1-202ENST00000319170 EPRSP07814 1512 aaKnown RBP16.32■□□□□ 0.2
RAPH1-202ENST00000319170 POTEB2H3BUK9 544 aa16.32■□□□□ 0.2
RAPH1-202ENST00000319170 MTIF2P46199 727 aaKnown RBP16.32■□□□□ 0.2
RAPH1-202ENST00000319170 PRDM11Q9NQV5 511 aa16.32■□□□□ 0.2
RAPH1-202ENST00000319170 SLC5A1P13866 664 aa16.32■□□□□ 0.2
RAPH1-202ENST00000319170 NFE2L2Q16236 605 aa16.32■□□□□ 0.2
RAPH1-202ENST00000319170 CCDC144CPQ8IYA2 1237 aa16.32■□□□□ 0.2
RAPH1-202ENST00000319170 NAA15Q9BXJ9 866 aaKnown RBP16.32■□□□□ 0.2
RAPH1-202ENST00000319170 TTLL12Q14166 644 aaPredicted RBP16.32■□□□□ 0.2
RAPH1-202ENST00000319170 DUSP27Q5VZP5 1158 aa16.32■□□□□ 0.2
RAPH1-202ENST00000319170 GPATCH11Q8N954 259 aa16.32■□□□□ 0.2
RAPH1-202ENST00000319170 FAM107BQ9H098 131 aa16.32■□□□□ 0.2
RAPH1-202ENST00000319170 NLRP5P59047 1200 aa16.32■□□□□ 0.2
RAPH1-202ENST00000319170 CCT2P78371 535 aaKnown RBP16.32■□□□□ 0.2
RAPH1-202ENST00000319170 HMGB1P09429 215 aaKnown RBP16.31■□□□□ 0.2
RAPH1-202ENST00000319170 GLRX3O76003 335 aaKnown RBP16.31■□□□□ 0.2
RAPH1-202ENST00000319170 MCM10Q7L590 875 aa16.31■□□□□ 0.2
RAPH1-202ENST00000319170 IFIT1P09914 478 aaKnown RBP16.31■□□□□ 0.2
RAPH1-202ENST00000319170 ZNF444Q8N0Y2 327 aaPredicted RBP16.31■□□□□ 0.2
RAPH1-202ENST00000319170 PUF60Q9UHX1 559 aaKnown RBP16.31■□□□□ 0.2
RAPH1-202ENST00000319170 SPECC1Q5M775 1068 aa16.31■□□□□ 0.2
RAPH1-202ENST00000319170 FSIP1Q8NA03 581 aa16.31■□□□□ 0.2
RAPH1-202ENST00000319170 TMCO5BA8MYB1 307 aa16.31■□□□□ 0.2
RAPH1-202ENST00000319170 SPATA24Q86W54 205 aa16.31■□□□□ 0.2
RAPH1-202ENST00000319170 TMEM87AQ8NBN3 555 aa16.31■□□□□ 0.2
RAPH1-202ENST00000319170 FEZ1Q99689 392 aa16.31■□□□□ 0.2
RAPH1-202ENST00000319170 SERPINA10Q9UK55 444 aa16.31■□□□□ 0.2
RAPH1-202ENST00000319170 FERP16591 822 aa16.3■□□□□ 0.2
RAPH1-202ENST00000319170 DDX23Q9BUQ8 820 aaKnown RBP16.3■□□□□ 0.2
RAPH1-202ENST00000319170 TMOD3Q9NYL9 352 aa16.3■□□□□ 0.2
RAPH1-202ENST00000319170 LMAN1P49257 510 aa16.3■□□□□ 0.2
RAPH1-202ENST00000319170 MAP3K12Q12852 859 aa16.3■□□□□ 0.2
RAPH1-202ENST00000319170 SYCP3Q8IZU3 236 aa16.3■□□□□ 0.2
RAPH1-202ENST00000319170 HOMER2Q9NSB8 354 aa16.3■□□□□ 0.2
RAPH1-202ENST00000319170 CALCOCO1Q9P1Z2 691 aa16.3■□□□□ 0.2
RAPH1-202ENST00000319170 NOP2P46087 812 aaKnown RBP16.3■□□□□ 0.2
RAPH1-202ENST00000319170 CALML4Q96GE6 196 aa16.3■□□□□ 0.2
RAPH1-202ENST00000319170 ZNF213O14771 459 aa16.3■□□□□ 0.2
RAPH1-202ENST00000319170 TMPOP42166 694 aaKnown RBP16.3■□□□□ 0.2
RAPH1-202ENST00000319170 IQCA1Q86XH1 822 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms