RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 NEFHP12036 1026 aa16.21■□□□□ 0.19
EDEM3-201ENST00000318130 SNRKQ9NRH2 765 aa16.21■□□□□ 0.19
EDEM3-201ENST00000318130 NCAPD3P42695 1498 aa16.21■□□□□ 0.19
EDEM3-201ENST00000318130 BLOC1S2Q6QNY1 142 aa16.21■□□□□ 0.19
EDEM3-201ENST00000318130 MSL1Q68DK7 614 aa16.2■□□□□ 0.18
EDEM3-201ENST00000318130 LRRC59Q96AG4 307 aaKnown RBP16.2■□□□□ 0.18
EDEM3-201ENST00000318130 CCT4P50991 539 aaKnown RBP16.2■□□□□ 0.18
EDEM3-201ENST00000318130 PTPN14Q15678 1187 aa16.2■□□□□ 0.18
EDEM3-201ENST00000318130 TAX1BP1Q86VP1 789 aa16.2■□□□□ 0.18
EDEM3-201ENST00000318130 KIF14Q15058 1648 aa16.2■□□□□ 0.18
EDEM3-201ENST00000318130 GUCY1B3Q02153 619 aa16.2■□□□□ 0.18
EDEM3-201ENST00000318130 IFIT5Q13325 482 aaKnown RBP16.2■□□□□ 0.18
EDEM3-201ENST00000318130 ZSCAN31Q96LW9 406 aaPredicted RBP16.2■□□□□ 0.18
EDEM3-201ENST00000318130 LRRFIP2Q9Y608 721 aaKnown RBP16.2■□□□□ 0.18
EDEM3-201ENST00000318130 CFAP45Q9UL16 551 aa16.2■□□□□ 0.18
EDEM3-201ENST00000318130 FAM83GA6ND36 823 aa16.2■□□□□ 0.18
EDEM3-201ENST00000318130 ERICH3Q5RHP9 1530 aa16.19■□□□□ 0.18
EDEM3-201ENST00000318130 TRERF1Q96PN7 1200 aa16.19■□□□□ 0.18
EDEM3-201ENST00000318130 SEC63Q9UGP8 760 aaKnown RBP16.19■□□□□ 0.18
EDEM3-201ENST00000318130 CCDC61Q9Y6R9 512 aa16.19■□□□□ 0.18
EDEM3-201ENST00000318130 CGNQ9P2M7 1197 aaKnown RBP16.19■□□□□ 0.18
EDEM3-201ENST00000318130 MAP3K2Q9Y2U5 619 aa16.19■□□□□ 0.18
EDEM3-201ENST00000318130 IDI1Q13907 227 aa16.18■□□□□ 0.18
EDEM3-201ENST00000318130 ENOX2Q16206 610 aaKnown RBP16.18■□□□□ 0.18
EDEM3-201ENST00000318130 ZHX1Q9UKY1 873 aaPredicted RBP16.18■□□□□ 0.18
EDEM3-201ENST00000318130 ZNF444Q8N0Y2 327 aaPredicted RBP16.18■□□□□ 0.18
EDEM3-201ENST00000318130 SSFA2P28290 1259 aa16.18■□□□□ 0.18
EDEM3-201ENST00000318130 TAF7Q15545 349 aaPredicted RBP16.18■□□□□ 0.18
EDEM3-201ENST00000318130 C20orf194Q5TEA3 1177 aa16.18■□□□□ 0.18
EDEM3-201ENST00000318130 FERMT3Q86UX7 667 aa16.18■□□□□ 0.18
EDEM3-201ENST00000318130 LUC7LQ9NQ29 371 aaKnown RBP16.18■□□□□ 0.18
EDEM3-201ENST00000318130 PARP3Q9Y6F1 533 aa16.18■□□□□ 0.18
EDEM3-201ENST00000318130 ADGRF5Q8IZF2 1346 aa16.18■□□□□ 0.18
EDEM3-201ENST00000318130 STIM1Q13586 685 aa16.17■□□□□ 0.18
EDEM3-201ENST00000318130 ZSCAN25Q6NSZ9 544 aa16.17■□□□□ 0.18
EDEM3-201ENST00000318130 EHBP1L1Q8N3D4 1523 aa16.17■□□□□ 0.18
EDEM3-201ENST00000318130 DAPK1P53355 1430 aa16.17■□□□□ 0.18
EDEM3-201ENST00000318130 CFAP100Q494V2 611 aa16.17■□□□□ 0.18
EDEM3-201ENST00000318130 TRIM22Q8IYM9 498 aa16.17■□□□□ 0.18
EDEM3-201ENST00000318130 SMTNL1A8MU46 457 aa16.17■□□□□ 0.18
EDEM3-201ENST00000318130 ARHGAP29Q52LW3 1261 aa16.17■□□□□ 0.18
EDEM3-201ENST00000318130 EAPPQ56P03 285 aaPredicted RBP16.17■□□□□ 0.18
EDEM3-201ENST00000318130 TBC1D2Q9BYX2 928 aa16.17■□□□□ 0.18
EDEM3-201ENST00000318130 IFIT1P09914 478 aaKnown RBP16.17■□□□□ 0.18
EDEM3-201ENST00000318130 TNPO1Q92973 898 aaKnown RBP16.17■□□□□ 0.18
EDEM3-201ENST00000318130 ANKRD18BA2A2Z9 1011 aa16.17■□□□□ 0.18
EDEM3-201ENST00000318130 SLC5A1P13866 664 aa16.17■□□□□ 0.18
EDEM3-201ENST00000318130 SLFN5Q08AF3 891 aa16.17■□□□□ 0.18
EDEM3-201ENST00000318130 IQCEQ6IPM2 695 aa16.17■□□□□ 0.18
EDEM3-201ENST00000318130 SETDB2Q96T68 719 aa16.17■□□□□ 0.18
EDEM3-201ENST00000318130 ANKRD62A6NC57 917 aa16.16■□□□□ 0.18
EDEM3-201ENST00000318130 NBPF14Q5TI25 921 aa16.16■□□□□ 0.18
EDEM3-201ENST00000318130 FAM135AQ9P2D6 1515 aa16.16■□□□□ 0.18
EDEM3-201ENST00000318130 FAM98CQ17RN3 349 aaKnown RBP16.16■□□□□ 0.18
EDEM3-201ENST00000318130 TMEM57Q8N5G2 664 aa16.16■□□□□ 0.18
EDEM3-201ENST00000318130 ARAP1Q96P48 1450 aa16.16■□□□□ 0.18
EDEM3-201ENST00000318130 EPB41L2O43491 1005 aaKnown RBP16.16■□□□□ 0.18
EDEM3-201ENST00000318130 MYO1BO43795 1136 aa16.16■□□□□ 0.18
EDEM3-201ENST00000318130 DDB1Q16531 1140 aa16.16■□□□□ 0.18
EDEM3-201ENST00000318130 USP25Q9UHP3 1055 aa16.16■□□□□ 0.18
EDEM3-201ENST00000318130 KIF2AO00139 706 aaPredicted RBP16.15■□□□□ 0.18
EDEM3-201ENST00000318130 SFPQP23246 707 aaKnown RBP eCLIP16.15■□□□□ 0.18
EDEM3-201ENST00000318130 CCDC183Q5T5S1 534 aa16.15■□□□□ 0.18
EDEM3-201ENST00000318130 CASTP20810 708 aaKnown RBP16.15■□□□□ 0.18
EDEM3-201ENST00000318130 LRPPRCP42704 1394 aaKnown RBP16.15■□□□□ 0.18
EDEM3-201ENST00000318130 A0A087WZG4 1122 aa16.15■□□□□ 0.18
EDEM3-201ENST00000318130 SAMM50Q9Y512 469 aa16.15■□□□□ 0.18
EDEM3-201ENST00000318130 KIF18AQ8NI77 898 aa16.15■□□□□ 0.18
EDEM3-201ENST00000318130 DRC1Q96MC2 740 aa16.15■□□□□ 0.18
EDEM3-201ENST00000318130 SEPT7Q16181 437 aaKnown RBP16.15■□□□□ 0.18
EDEM3-201ENST00000318130 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.15■□□□□ 0.18
EDEM3-201ENST00000318130 POLR3GO15318 223 aaPredicted RBP16.15■□□□□ 0.18
EDEM3-201ENST00000318130 ZNF608Q9ULD9 1512 aaPredicted RBP16.14■□□□□ 0.17
EDEM3-201ENST00000318130 BTG4Q9NY30 223 aa16.14■□□□□ 0.17
EDEM3-201ENST00000318130 IQGAP2Q13576 1575 aa16.14■□□□□ 0.17
EDEM3-201ENST00000318130 DNMBPQ6XZF7 1577 aa16.14■□□□□ 0.17
EDEM3-201ENST00000318130 WASLO00401 505 aaPredicted RBP16.14■□□□□ 0.17
EDEM3-201ENST00000318130 ZRSR2Q15696 482 aaKnown RBP16.14■□□□□ 0.17
EDEM3-201ENST00000318130 PPP4R3BQ5MIZ7 849 aa16.14■□□□□ 0.17
EDEM3-201ENST00000318130 CCDC83Q8IWF9 413 aa16.14■□□□□ 0.17
EDEM3-201ENST00000318130 TXLNBQ8N3L3 684 aa16.14■□□□□ 0.17
EDEM3-201ENST00000318130 ZMYND15Q9H091 742 aa16.14■□□□□ 0.17
EDEM3-201ENST00000318130 ZRANB1Q9UGI0 708 aa16.14■□□□□ 0.17
EDEM3-201ENST00000318130 ACEP12821 1306 aa16.14■□□□□ 0.17
EDEM3-201ENST00000318130 URI1O94763 535 aaPredicted RBP16.14■□□□□ 0.17
EDEM3-201ENST00000318130 CRACR2AQ9BSW2 395 aa16.14■□□□□ 0.17
EDEM3-201ENST00000318130 TSHZ3Q63HK5 1081 aa16.14■□□□□ 0.17
EDEM3-201ENST00000318130 GIMAP7Q8NHV1 300 aa16.14■□□□□ 0.17
EDEM3-201ENST00000318130 PLEKHH2Q8IVE3 1493 aa16.14■□□□□ 0.17
EDEM3-201ENST00000318130 TNNT1P13805 278 aa16.13■□□□□ 0.17
EDEM3-201ENST00000318130 MMRN2Q9H8L6 949 aa16.13■□□□□ 0.17
EDEM3-201ENST00000318130 TROQ12816 1431 aaPredicted RBP16.13■□□□□ 0.17
EDEM3-201ENST00000318130 KIAA1328Q86T90 577 aa16.13■□□□□ 0.17
EDEM3-201ENST00000318130 C16orf45Q96MC5 204 aaPredicted RBP16.13■□□□□ 0.17
EDEM3-201ENST00000318130 CALCOCO1Q9P1Z2 691 aa16.13■□□□□ 0.17
EDEM3-201ENST00000318130 UBE2Q2Q8WVN8 375 aa16.13■□□□□ 0.17
EDEM3-201ENST00000318130 GBP3Q9H0R5 595 aa16.13■□□□□ 0.17
EDEM3-201ENST00000318130 CLIP2Q9UDT6 1046 aa16.13■□□□□ 0.17
EDEM3-201ENST00000318130 HAND2P61296 217 aa16.12■□□□□ 0.17
EDEM3-201ENST00000318130 WDR97A6NE52 1622 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms