RNA–Protein interactions for RNA: ENST00000317702.9

TUBB6-201, Transcript of tubulin beta 6 class V, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB6, Length 2,064 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-201ENST00000317702 PI4KAP2A4QPH2 592 aa35.23■■■■□ 3.23
TUBB6-201ENST00000317702 PI4KAP1Q8N8J0 262 aa35.23■■■■□ 3.23
TUBB6-201ENST00000317702 DNAAF4Q8WXU2 420 aa35.23■■■■□ 3.23
TUBB6-201ENST00000317702 EIF5BO60841 1220 aaKnown RBP35.23■■■■□ 3.23
TUBB6-201ENST00000317702 SRCIN1Q9C0H9 1055 aa35.23■■■■□ 3.23
TUBB6-201ENST00000317702 OTUD7AQ8TE49 926 aaPredicted RBP35.22■■■■□ 3.23
TUBB6-201ENST00000317702 LRRFIP2Q9Y608 721 aaKnown RBP35.22■■■■□ 3.23
TUBB6-201ENST00000317702 SMARCA5O60264 1052 aaPredicted RBP35.21■■■■□ 3.23
TUBB6-201ENST00000317702 PARP4Q9UKK3 1724 aaKnown RBP35.21■■■■□ 3.23
TUBB6-201ENST00000317702 APBB1O00213 710 aa35.21■■■■□ 3.23
TUBB6-201ENST00000317702 BEND3Q5T5X7 828 aa35.21■■■■□ 3.23
TUBB6-201ENST00000317702 KIF2CQ99661 725 aa35.21■■■■□ 3.23
TUBB6-201ENST00000317702 ATP8B2P98198 1209 aa35.2■■■■□ 3.22
TUBB6-201ENST00000317702 C5P01031 1676 aa35.19■■■■□ 3.22
TUBB6-201ENST00000317702 HSP90AB1P08238 724 aaKnown RBP35.19■■■■□ 3.22
TUBB6-201ENST00000317702 PNMA6EA0A0J9YXQ4 647 aa35.18■■■■□ 3.22
TUBB6-201ENST00000317702 UBTFL1P0CB47 393 aaPredicted RBP35.18■■■■□ 3.22
TUBB6-201ENST00000317702 CHMP5Q9NZZ3 219 aa35.18■■■■□ 3.22
TUBB6-201ENST00000317702 PDIA6Q15084 440 aa35.15■■■■□ 3.22
TUBB6-201ENST00000317702 CARD10Q9BWT7 1032 aa35.15■■■■□ 3.22
TUBB6-201ENST00000317702 ZNF496Q96IT1 587 aaPredicted RBP35.15■■■■□ 3.22
TUBB6-201ENST00000317702 HYPKQ9NX55 129 aa35.15■■■■□ 3.22
TUBB6-201ENST00000317702 ZCRB1Q8TBF4 217 aaKnown RBP35.14■■■■□ 3.22
TUBB6-201ENST00000317702 DDX21Q9NR30 783 aaKnown RBP eCLIP35.14■■■■□ 3.22
TUBB6-201ENST00000317702 LARP1Q6PKG0 1096 aaKnown RBP35.13■■■■□ 3.22
TUBB6-201ENST00000317702 STRN4Q9NRL3 753 aa35.13■■■■□ 3.22
TUBB6-201ENST00000317702 EXOC6BQ9Y2D4 811 aa35.13■■■■□ 3.21
TUBB6-201ENST00000317702 MAP3K2Q9Y2U5 619 aa35.12■■■■□ 3.21
TUBB6-201ENST00000317702 PCDH11XQ9BZA7 1347 aa35.12■■■■□ 3.21
TUBB6-201ENST00000317702 PCDH11YQ9BZA8 1340 aa35.12■■■■□ 3.21
TUBB6-201ENST00000317702 SDSP20132 328 aa35.12■■■■□ 3.21
TUBB6-201ENST00000317702 CABP4P57796 275 aa35.12■■■■□ 3.21
TUBB6-201ENST00000317702 KSR2Q6VAB6 950 aa35.12■■■■□ 3.21
TUBB6-201ENST00000317702 NBPF7P0C2Y1 421 aaPredicted RBP35.1■■■■□ 3.21
TUBB6-201ENST00000317702 IL2RBP14784 551 aa35.09■■■■□ 3.21
TUBB6-201ENST00000317702 TTC5Q8N0Z6 440 aa35.09■■■■□ 3.21
TUBB6-201ENST00000317702 OSBPL3Q9H4L5 887 aa35.09■■■■□ 3.21
TUBB6-201ENST00000317702 EVA1CP58658 441 aa35.09■■■■□ 3.21
TUBB6-201ENST00000317702 ROBO1Q9Y6N7 1651 aa35.07■■■■□ 3.21
TUBB6-201ENST00000317702 CASC1Q6TDU7 716 aa35.07■■■■□ 3.21
TUBB6-201ENST00000317702 IBTKQ9P2D0 1353 aaPredicted RBP35.06■■■■□ 3.2
TUBB6-201ENST00000317702 SSH3Q8TE77 659 aa35.06■■■■□ 3.2
TUBB6-201ENST00000317702 GLI3P10071 1580 aa35.06■■■■□ 3.2
TUBB6-201ENST00000317702 SNRPA1P09661 255 aaKnown RBP35.05■■■■□ 3.2
TUBB6-201ENST00000317702 DDIT3P35638 169 aa35.05■■■■□ 3.2
TUBB6-201ENST00000317702 FMNL2Q96PY5 1086 aa35.05■■■■□ 3.2
TUBB6-201ENST00000317702 SHANK3Q9BYB0 1731 aa35.05■■■■□ 3.2
TUBB6-201ENST00000317702 PDE1AP54750 535 aa35.05■■■■□ 3.2
TUBB6-201ENST00000317702 AIMP1Q12904 312 aaKnown RBP35.04■■■■□ 3.2
TUBB6-201ENST00000317702 LRRCC1Q9C099 1032 aa35.04■■■■□ 3.2
TUBB6-201ENST00000317702 USP16Q9Y5T5 823 aa35.04■■■■□ 3.2
TUBB6-201ENST00000317702 ALDH1L1O75891 902 aa35.04■■■■□ 3.2
TUBB6-201ENST00000317702 POLA2Q14181 598 aa35.03■■■■□ 3.2
TUBB6-201ENST00000317702 PPP1R42Q7Z4L9 355 aa35.03■■■■□ 3.2
TUBB6-201ENST00000317702 USP26Q9BXU7 913 aa35.02■■■■□ 3.2
TUBB6-201ENST00000317702 CD2BP2O95400 341 aaKnown RBP35.02■■■■□ 3.2
TUBB6-201ENST00000317702 DDX58O95786 925 aaKnown RBP35.02■■■■□ 3.2
TUBB6-201ENST00000317702 MYL6BP14649 208 aa35.02■■■■□ 3.2
TUBB6-201ENST00000317702 NKX1-1Q15270 411 aaPredicted RBP35.02■■■■□ 3.2
TUBB6-201ENST00000317702 RBM42Q9BTD8 480 aaKnown RBP35.02■■■■□ 3.2
TUBB6-201ENST00000317702 AHDC1Q5TGY3 1603 aaPredicted RBP35.01■■■■□ 3.2
TUBB6-201ENST00000317702 K7ELQ4 463 aaPredicted RBP35.01■■■■□ 3.19
TUBB6-201ENST00000317702 MCM4P33991 863 aa35.01■■■■□ 3.19
TUBB6-201ENST00000317702 CWF19L2Q2TBE0 894 aaKnown RBP35.01■■■■□ 3.19
TUBB6-201ENST00000317702 SALL3Q9BXA9 1300 aa35■■■■□ 3.19
TUBB6-201ENST00000317702 LTBP4Q8N2S1 1624 aa35■■■■□ 3.19
TUBB6-201ENST00000317702 ERVV-2B6SEH9 535 aa34.99■■■■□ 3.19
TUBB6-201ENST00000317702 LRP10Q7Z4F1 713 aa34.99■■■■□ 3.19
TUBB6-201ENST00000317702 DDX54Q8TDD1 881 aaKnown RBP34.99■■■■□ 3.19
TUBB6-201ENST00000317702 BTG4Q9NY30 223 aa34.99■■■■□ 3.19
TUBB6-201ENST00000317702 XAGE3Q8WTP9 111 aa34.98■■■■□ 3.19
TUBB6-201ENST00000317702 CIZ1Q9ULV3 898 aaPredicted RBP34.98■■■■□ 3.19
TUBB6-201ENST00000317702 RABEP1Q15276 862 aa34.97■■■■□ 3.19
TUBB6-201ENST00000317702 LINS1Q8NG48 757 aa34.97■■■■□ 3.19
TUBB6-201ENST00000317702 SRGAP3O43295 1099 aa34.96■■■■□ 3.19
TUBB6-201ENST00000317702 C9orf78Q9NZ63 289 aaPredicted RBP34.96■■■■□ 3.19
TUBB6-201ENST00000317702 PIP4K2AP48426 406 aaPredicted RBP34.95■■■■□ 3.19
TUBB6-201ENST00000317702 COPS6Q7L5N1 327 aa34.95■■■■□ 3.19
TUBB6-201ENST00000317702 RIC3Q7Z5B4 369 aa34.95■■■■□ 3.19
TUBB6-201ENST00000317702 REC8O95072 547 aa34.94■■■■□ 3.18
TUBB6-201ENST00000317702 COL22A1Q8NFW1 1626 aaPredicted RBP34.94■■■■□ 3.18
TUBB6-201ENST00000317702 LAMB4A4D0S4 1761 aa34.94■■■■□ 3.18
TUBB6-201ENST00000317702 MX1P20591 662 aa34.94■■■■□ 3.18
TUBB6-201ENST00000317702 COL14A1Q05707 1796 aaKnown RBP34.93■■■■□ 3.18
TUBB6-201ENST00000317702 HSP90AA1P07900 732 aaKnown RBP34.93■■■■□ 3.18
TUBB6-201ENST00000317702 PAPPAQ13219 1627 aa34.92■■■■□ 3.18
TUBB6-201ENST00000317702 UBR2Q8IWV8 1755 aa34.92■■■■□ 3.18
TUBB6-201ENST00000317702 ERC2O15083 957 aa34.92■■■■□ 3.18
TUBB6-201ENST00000317702 SURF6O75683 361 aaKnown RBP34.92■■■■□ 3.18
TUBB6-201ENST00000317702 IGKV5-2P06315 115 aa34.92■■■■□ 3.18
TUBB6-201ENST00000317702 COL16A1Q07092 1604 aaPredicted RBP34.91■■■■□ 3.18
TUBB6-201ENST00000317702 KCPQ6ZWJ8 1503 aa34.91■■■■□ 3.18
TUBB6-201ENST00000317702 UTYO14607 1347 aa34.91■■■■□ 3.18
TUBB6-201ENST00000317702 MTX1Q13505 466 aa34.91■■■■□ 3.18
TUBB6-201ENST00000317702 RAB11FIP3O75154 756 aa34.9■■■■□ 3.18
TUBB6-201ENST00000317702 TSHZ3Q63HK5 1081 aa34.9■■■■□ 3.18
TUBB6-201ENST00000317702 TOGARAM1Q9Y4F4 1720 aa34.89■■■■□ 3.18
TUBB6-201ENST00000317702 GRM8O00222 908 aa34.89■■■■□ 3.18
TUBB6-201ENST00000317702 STAP2Q9UGK3 403 aa34.89■■■■□ 3.18
TUBB6-201ENST00000317702 TUBGCP6Q96RT7 1819 aa34.88■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 222.9 ms