RNA–Protein interactions for RNA: ENST00000312756.4

GFM1-202, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2

Gene GFM1, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-202ENST00000312756 SMAP1Q8IYB5 467 aaPredicted RBP9.72□□□□□ -0.85
GFM1-202ENST00000312756 AK7Q96M32 723 aa9.72□□□□□ -0.85
GFM1-202ENST00000312756 MAP3K5Q99683 1374 aa9.72□□□□□ -0.85
GFM1-202ENST00000312756 CYP27B1O15528 508 aa9.71□□□□□ -0.86
GFM1-202ENST00000312756 EXOSC9Q06265 439 aaKnown RBP9.71□□□□□ -0.86
GFM1-202ENST00000312756 GSE1Q14687 1217 aa9.71□□□□□ -0.86
GFM1-202ENST00000312756 TMCO4Q5TGY1 634 aa9.71□□□□□ -0.86
GFM1-202ENST00000312756 NGEFQ8N5V2 710 aa9.71□□□□□ -0.86
GFM1-202ENST00000312756 MBIPQ9NS73 344 aa9.71□□□□□ -0.86
GFM1-202ENST00000312756 PKD1L3Q7Z443 1732 aa9.71□□□□□ -0.86
GFM1-202ENST00000312756 BCL9LQ86UU0 1499 aa9.7□□□□□ -0.86
GFM1-202ENST00000312756 PARP4Q9UKK3 1724 aaKnown RBP9.7□□□□□ -0.86
GFM1-202ENST00000312756 ELL2O00472 640 aaPredicted RBP9.7□□□□□ -0.86
GFM1-202ENST00000312756 IRX3P78415 501 aaPredicted RBP9.7□□□□□ -0.86
GFM1-202ENST00000312756 UTP14CQ5TAP6 766 aaKnown RBP9.7□□□□□ -0.86
GFM1-202ENST00000312756 FOXD4L5Q5VV16 416 aaPredicted RBP9.7□□□□□ -0.86
GFM1-202ENST00000312756 FAM43BQ6ZT52 329 aaPredicted RBP9.7□□□□□ -0.86
GFM1-202ENST00000312756 FNBP4Q8N3X1 1017 aaPredicted RBP9.7□□□□□ -0.86
GFM1-202ENST00000312756 FOXD4L4Q8WXT5 416 aaPredicted RBP9.7□□□□□ -0.86
GFM1-202ENST00000312756 RTF1Q92541 710 aaKnown RBP9.7□□□□□ -0.86
GFM1-202ENST00000312756 OVOS2A0A0G2JMS6 1433 aa9.7□□□□□ -0.86
GFM1-202ENST00000312756 NWD2Q9ULI1 1742 aa9.7□□□□□ -0.86
GFM1-202ENST00000312756 LRRC37A3O60309 1634 aa9.7□□□□□ -0.86
GFM1-202ENST00000312756 PLIN1O60240 522 aa9.7□□□□□ -0.86
GFM1-202ENST00000312756 ZNF853P0CG23 659 aa9.7□□□□□ -0.86
GFM1-202ENST00000312756 IL2RBP14784 551 aa9.7□□□□□ -0.86
GFM1-202ENST00000312756 FLIIQ13045 1269 aa9.7□□□□□ -0.86
GFM1-202ENST00000312756 DDX54Q8TDD1 881 aaKnown RBP9.7□□□□□ -0.86
GFM1-202ENST00000312756 USP21Q9UK80 565 aa9.7□□□□□ -0.86
GFM1-202ENST00000312756 RCAN3Q9UKA8 241 aa9.7□□□□□ -0.86
GFM1-202ENST00000312756 STK24Q9Y6E0 443 aa9.7□□□□□ -0.86
GFM1-202ENST00000312756 WNK3Q9BYP7 1800 aa9.69□□□□□ -0.86
GFM1-202ENST00000312756 PHKG2P15735 406 aa9.69□□□□□ -0.86
GFM1-202ENST00000312756 LMOD3Q0VAK6 560 aa9.69□□□□□ -0.86
GFM1-202ENST00000312756 AMOTQ4VCS5 1084 aa9.69□□□□□ -0.86
GFM1-202ENST00000312756 AKAP4Q5JQC9 854 aa9.69□□□□□ -0.86
GFM1-202ENST00000312756 TSPYL6Q8N831 410 aa9.69□□□□□ -0.86
GFM1-202ENST00000312756 BCL2L13Q9BXK5 485 aa9.69□□□□□ -0.86
GFM1-202ENST00000312756 KDM6AO15550 1401 aaPredicted RBP9.68□□□□□ -0.86
GFM1-202ENST00000312756 TCERG1O14776 1098 aaKnown RBP9.68□□□□□ -0.86
GFM1-202ENST00000312756 BCAR3O75815 825 aa9.68□□□□□ -0.86
GFM1-202ENST00000312756 C1orf141Q5JVX7 400 aa9.68□□□□□ -0.86
GFM1-202ENST00000312756 UNC5CLQ8IV45 518 aa9.68□□□□□ -0.86
GFM1-202ENST00000312756 RGS17Q9UGC6 210 aaPredicted RBP9.68□□□□□ -0.86
GFM1-202ENST00000312756 IL16Q14005 1332 aa9.68□□□□□ -0.86
GFM1-202ENST00000312756 SPATA31A1Q5TZJ5 1347 aa9.68□□□□□ -0.86
GFM1-202ENST00000312756 RNMTO43148 476 aaKnown RBP9.68□□□□□ -0.86
GFM1-202ENST00000312756 KCNQ3O43525 872 aa9.68□□□□□ -0.86
GFM1-202ENST00000312756 MFAP1P55081 439 aaKnown RBP9.68□□□□□ -0.86
GFM1-202ENST00000312756 C8orf58Q8NAV2 365 aa9.68□□□□□ -0.86
GFM1-202ENST00000312756 ZCRB1Q8TBF4 217 aaKnown RBP9.68□□□□□ -0.86
GFM1-202ENST00000312756 MYH16Q9H6N6 1097 aa9.68□□□□□ -0.86
GFM1-202ENST00000312756 IFT57Q9NWB7 429 aa9.68□□□□□ -0.86
GFM1-202ENST00000312756 SPG7Q9UQ90 795 aa9.68□□□□□ -0.86
GFM1-202ENST00000312756 SCN11AQ9UI33 1791 aa9.67□□□□□ -0.86
GFM1-202ENST00000312756 DISP2A7MBM2 1401 aa9.67□□□□□ -0.86
GFM1-202ENST00000312756 DNAJC2Q99543 621 aaKnown RBP9.67□□□□□ -0.86
GFM1-202ENST00000312756 SPATA31A5Q5VU36 1347 aa9.67□□□□□ -0.86
GFM1-202ENST00000312756 SPATA31A7Q8IWB4 1347 aa9.67□□□□□ -0.86
GFM1-202ENST00000312756 CEMIPQ8WUJ3 1361 aa9.67□□□□□ -0.86
GFM1-202ENST00000312756 CHL1O00533 1208 aa9.66□□□□□ -0.86
GFM1-202ENST00000312756 GNAI1P63096 354 aa9.66□□□□□ -0.86
GFM1-202ENST00000312756 FAM98CQ17RN3 349 aaKnown RBP9.66□□□□□ -0.86
GFM1-202ENST00000312756 HDAC5Q9UQL6 1122 aa9.66□□□□□ -0.86
GFM1-202ENST00000312756 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.66□□□□□ -0.86
GFM1-202ENST00000312756 TRAK2O60296 914 aa9.66□□□□□ -0.86
GFM1-202ENST00000312756 ZNF772Q68DY9 489 aaPredicted RBP9.66□□□□□ -0.86
GFM1-202ENST00000312756 CERS3Q8IU89 383 aa9.66□□□□□ -0.86
GFM1-202ENST00000312756 IFNL2Q8IZJ0 200 aa9.66□□□□□ -0.86
GFM1-202ENST00000312756 TSPYL4Q9UJ04 414 aa9.66□□□□□ -0.86
GFM1-202ENST00000312756 ADAMTS7Q9UKP4 1686 aa9.66□□□□□ -0.86
GFM1-202ENST00000312756 TOGARAM1Q9Y4F4 1720 aa9.66□□□□□ -0.86
GFM1-202ENST00000312756 SIPA1L3O60292 1781 aaPredicted RBP9.66□□□□□ -0.86
GFM1-202ENST00000312756 HTATSF1O43719 755 aaKnown RBP9.65□□□□□ -0.86
GFM1-202ENST00000312756 SLC39A6Q13433 755 aa9.65□□□□□ -0.86
GFM1-202ENST00000312756 POTEAQ6S8J7 498 aa9.65□□□□□ -0.86
GFM1-202ENST00000312756 QTRT2Q9H974 415 aaKnown RBP9.65□□□□□ -0.86
GFM1-202ENST00000312756 PRDM16Q9HAZ2 1276 aa9.65□□□□□ -0.86
GFM1-202ENST00000312756 TNNQ9UQP3 1299 aa9.65□□□□□ -0.86
GFM1-202ENST00000312756 MAFGO15525 162 aa9.65□□□□□ -0.87
GFM1-202ENST00000312756 PSEN1P49768 467 aa9.65□□□□□ -0.87
GFM1-202ENST00000312756 C20orf194Q5TEA3 1177 aa9.65□□□□□ -0.87
GFM1-202ENST00000312756 NFATC2IPQ8NCF5 419 aa9.65□□□□□ -0.87
GFM1-202ENST00000312756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.65□□□□□ -0.871e-7■■□□□ 14.4
GFM1-202ENST00000312756 TRPC5Q9UL62 973 aaPredicted RBP9.65□□□□□ -0.87
GFM1-202ENST00000312756 PCDH11XQ9BZA7 1347 aa9.65□□□□□ -0.87
GFM1-202ENST00000312756 PCDH11YQ9BZA8 1340 aa9.65□□□□□ -0.87
GFM1-202ENST00000312756 KAT6BQ8WYB5 2073 aa9.64□□□□□ -0.87
GFM1-202ENST00000312756 ATRNO75882 1429 aa9.64□□□□□ -0.87
GFM1-202ENST00000312756 EP400Q96L91 3159 aa9.64□□□□□ -0.87
GFM1-202ENST00000312756 PATL2C9JE40 543 aaKnown RBP9.64□□□□□ -0.87
GFM1-202ENST00000312756 RARSP54136 660 aaKnown RBP9.64□□□□□ -0.87
GFM1-202ENST00000312756 RRP1P56182 461 aaKnown RBP9.64□□□□□ -0.87
GFM1-202ENST00000312756 TEFQ10587 303 aa9.64□□□□□ -0.87
GFM1-202ENST00000312756 TAF7Q15545 349 aaPredicted RBP9.64□□□□□ -0.87
GFM1-202ENST00000312756 VPS72Q15906 364 aa9.64□□□□□ -0.87
GFM1-202ENST00000312756 TRIM44Q96DX7 344 aaPredicted RBP9.64□□□□□ -0.87
GFM1-202ENST00000312756 GLI3P10071 1580 aa9.64□□□□□ -0.87
GFM1-202ENST00000312756 KDM3BQ7LBC6 1761 aa9.64□□□□□ -0.87
GFM1-202ENST00000312756 PRAMEF22A3QJZ6 481 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms