RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 GBP3Q9H0R5 595 aa13.18□□□□□ -0.3
VCPIP1-201ENST00000310421 NUDT16Q96DE0 195 aaKnown RBP13.17□□□□□ -0.3
VCPIP1-201ENST00000310421 ZSCAN12O43309 604 aa13.17□□□□□ -0.3
VCPIP1-201ENST00000310421 KDM4AO75164 1064 aa13.17□□□□□ -0.3
VCPIP1-201ENST00000310421 FERMT1Q9BQL6 677 aa13.17□□□□□ -0.3
VCPIP1-201ENST00000310421 PIP4K2BP78356 416 aa13.17□□□□□ -0.3
VCPIP1-201ENST00000310421 CTAGE5O15320 804 aa13.17□□□□□ -0.3
VCPIP1-201ENST00000310421 MKNK2Q9HBH9 465 aa13.16□□□□□ -0.3
VCPIP1-201ENST00000310421 CATIPQ7Z7H3 387 aa13.16□□□□□ -0.3
VCPIP1-201ENST00000310421 TAF7Q15545 349 aaPredicted RBP13.16□□□□□ -0.3
VCPIP1-201ENST00000310421 DENND4BO75064 1496 aaPredicted RBP13.16□□□□□ -0.3
VCPIP1-201ENST00000310421 CENPHQ9H3R5 247 aa13.16□□□□□ -0.3
VCPIP1-201ENST00000310421 GIGYF2Q6Y7W6 1299 aaKnown RBP13.16□□□□□ -0.3
VCPIP1-201ENST00000310421 PLB1Q6P1J6 1458 aa13.16□□□□□ -0.3
VCPIP1-201ENST00000310421 CAVIN2O95810 425 aa13.15□□□□□ -0.3
VCPIP1-201ENST00000310421 GSTO1P78417 241 aa13.15□□□□□ -0.3
VCPIP1-201ENST00000310421 FAM114A1Q8IWE2 563 aa13.15□□□□□ -0.3
VCPIP1-201ENST00000310421 SPC24Q8NBT2 197 aa13.15□□□□□ -0.3
VCPIP1-201ENST00000310421 SLC12A7Q9Y666 1083 aa13.15□□□□□ -0.3
VCPIP1-201ENST00000310421 STAMBPO95630 424 aa13.15□□□□□ -0.3
VCPIP1-201ENST00000310421 RRS1Q15050 365 aaKnown RBP13.15□□□□□ -0.3
VCPIP1-201ENST00000310421 CDC5LQ99459 802 aaKnown RBP13.15□□□□□ -0.3
VCPIP1-201ENST00000310421 BAG3O95817 575 aa13.15□□□□□ -0.3
VCPIP1-201ENST00000310421 SFPQP23246 707 aaKnown RBP eCLIP13.15□□□□□ -0.3
VCPIP1-201ENST00000310421 DDX12PQ92771 950 aa13.15□□□□□ -0.3
VCPIP1-201ENST00000310421 TAOK3Q9H2K8 898 aa13.15□□□□□ -0.31
VCPIP1-201ENST00000310421 ABCF2Q9UG63 623 aa13.14□□□□□ -0.31
VCPIP1-201ENST00000310421 SSR1P43307 286 aaKnown RBP13.14□□□□□ -0.31
VCPIP1-201ENST00000310421 PDE4BQ07343 736 aa13.14□□□□□ -0.31
VCPIP1-201ENST00000310421 TRAF1Q13077 416 aa13.14□□□□□ -0.31
VCPIP1-201ENST00000310421 LRRFIP2Q9Y608 721 aaKnown RBP13.14□□□□□ -0.31
VCPIP1-201ENST00000310421 ANKRD18BA2A2Z9 1011 aa13.14□□□□□ -0.31
VCPIP1-201ENST00000310421 TMPOP42166 694 aaKnown RBP13.14□□□□□ -0.31
VCPIP1-201ENST00000310421 CCDC83Q8IWF9 413 aa13.14□□□□□ -0.31
VCPIP1-201ENST00000310421 BAG4O95429 457 aaKnown RBP13.14□□□□□ -0.31
VCPIP1-201ENST00000310421 CCDC178Q5BJE1 867 aa13.14□□□□□ -0.31
VCPIP1-201ENST00000310421 LRRC27Q9C0I9 530 aa13.14□□□□□ -0.31
VCPIP1-201ENST00000310421 KDM5BQ9UGL1 1544 aa13.14□□□□□ -0.31
VCPIP1-201ENST00000310421 GOLGA6L10A0A0M3HER8 536 aa13.14□□□□□ -0.31
VCPIP1-201ENST00000310421 HLA-DOAP06340 250 aa13.14□□□□□ -0.31
VCPIP1-201ENST00000310421 AMPD3Q01432 767 aa13.14□□□□□ -0.31
VCPIP1-201ENST00000310421 DRC1Q96MC2 740 aa13.14□□□□□ -0.31
VCPIP1-201ENST00000310421 TMEM87AQ8NBN3 555 aa13.13□□□□□ -0.31
VCPIP1-201ENST00000310421 MYO5CQ9NQX4 1742 aa13.13□□□□□ -0.31
VCPIP1-201ENST00000310421 TAX1BP1Q86VP1 789 aa13.13□□□□□ -0.31
VCPIP1-201ENST00000310421 KDM5AP29375 1690 aaKnown RBP13.13□□□□□ -0.31
VCPIP1-201ENST00000310421 PEG3Q9GZU2 1588 aa13.13□□□□□ -0.31
VCPIP1-201ENST00000310421 MYO1BO43795 1136 aa13.13□□□□□ -0.31
VCPIP1-201ENST00000310421 ALS2CR12Q96Q35 445 aa13.13□□□□□ -0.31
VCPIP1-201ENST00000310421 CCDC194A0A1B0GVG4 234 aa13.13□□□□□ -0.31
VCPIP1-201ENST00000310421 DUSP27Q5VZP5 1158 aa13.13□□□□□ -0.31
VCPIP1-201ENST00000310421 HOOK3Q86VS8 718 aa13.13□□□□□ -0.31
VCPIP1-201ENST00000310421 ZGPATQ8N5A5 531 aaKnown RBP13.13□□□□□ -0.31
VCPIP1-201ENST00000310421 CCDC96Q2M329 555 aa13.13□□□□□ -0.31
VCPIP1-201ENST00000310421 DBF4Q9UBU7 674 aaPredicted RBP13.13□□□□□ -0.31
VCPIP1-201ENST00000310421 KIF5CO60282 957 aa13.13□□□□□ -0.31
VCPIP1-201ENST00000310421 BCAR3O75815 825 aa13.13□□□□□ -0.31
VCPIP1-201ENST00000310421 ST5P78524 1137 aa13.13□□□□□ -0.31
VCPIP1-201ENST00000310421 NAIPQ13075 1403 aa13.12□□□□□ -0.31
VCPIP1-201ENST00000310421 RAPGEF3O95398 923 aa13.12□□□□□ -0.31
VCPIP1-201ENST00000310421 NBPF1Q3BBV0 1214 aa13.12□□□□□ -0.31
VCPIP1-201ENST00000310421 CFAP100Q494V2 611 aa13.12□□□□□ -0.31
VCPIP1-201ENST00000310421 PIK3R4Q99570 1358 aa13.12□□□□□ -0.31
VCPIP1-201ENST00000310421 TTLL12Q14166 644 aaPredicted RBP13.12□□□□□ -0.31
VCPIP1-201ENST00000310421 USP37Q86T82 979 aa13.12□□□□□ -0.31
VCPIP1-201ENST00000310421 CCDC97Q96F63 343 aaPredicted RBP13.12□□□□□ -0.31
VCPIP1-201ENST00000310421 C8orf76Q96K31 380 aa13.12□□□□□ -0.31
VCPIP1-201ENST00000310421 MSH6P52701 1360 aa13.12□□□□□ -0.31
VCPIP1-201ENST00000310421 GCOM1H8Y6P7 765 aaPredicted RBP13.12□□□□□ -0.31
VCPIP1-201ENST00000310421 MYZAPP0CAP1 466 aa13.12□□□□□ -0.31
VCPIP1-201ENST00000310421 ASXL1Q8IXJ9 1541 aa13.12□□□□□ -0.31
VCPIP1-201ENST00000310421 ANO10Q9NW15 660 aa13.12□□□□□ -0.31
VCPIP1-201ENST00000310421 HMG20BQ9P0W2 317 aa13.12□□□□□ -0.31
VCPIP1-201ENST00000310421 CCDC172P0C7W6 258 aa13.11□□□□□ -0.31
VCPIP1-201ENST00000310421 PDCL2Q8N4E4 241 aa13.11□□□□□ -0.31
VCPIP1-201ENST00000310421 BICDL1Q6ZP65 573 aa13.11□□□□□ -0.31
VCPIP1-201ENST00000310421 TAF3Q5VWG9 929 aa13.11□□□□□ -0.31
VCPIP1-201ENST00000310421 CCDC183Q5T5S1 534 aa13.11□□□□□ -0.31
VCPIP1-201ENST00000310421 EHBP1Q8NDI1 1231 aa13.11□□□□□ -0.31
VCPIP1-201ENST00000310421 ERMNQ8TAM6 284 aa13.11□□□□□ -0.31
VCPIP1-201ENST00000310421 ANKRD36BQ8N2N9 1353 aa13.11□□□□□ -0.31
VCPIP1-201ENST00000310421 SSRP1Q08945 709 aaKnown RBP13.11□□□□□ -0.31
VCPIP1-201ENST00000310421 SKIDA1Q1XH10 827 aa13.11□□□□□ -0.31
VCPIP1-201ENST00000310421 ZNF444Q8N0Y2 327 aaPredicted RBP13.11□□□□□ -0.31
VCPIP1-201ENST00000310421 MAP4K4O95819 1239 aaPredicted RBP13.11□□□□□ -0.31
VCPIP1-201ENST00000310421 CRACR2AQ9BSW2 395 aa13.11□□□□□ -0.31
VCPIP1-201ENST00000310421 ABCC5O15440 1437 aa13.11□□□□□ -0.31
VCPIP1-201ENST00000310421 LDHCP07864 332 aa13.1□□□□□ -0.31
VCPIP1-201ENST00000310421 PPP1R42Q7Z4L9 355 aa13.1□□□□□ -0.31
VCPIP1-201ENST00000310421 CACNA2D4Q7Z3S7 1137 aa13.1□□□□□ -0.31
VCPIP1-201ENST00000310421 KANK3Q6NY19 840 aa13.1□□□□□ -0.31
VCPIP1-201ENST00000310421 LRRC45Q96CN5 670 aa13.1□□□□□ -0.31
VCPIP1-201ENST00000310421 POTEB2H3BUK9 544 aa13.1□□□□□ -0.31
VCPIP1-201ENST00000310421 NEMFO60524 1076 aa13.1□□□□□ -0.31
VCPIP1-201ENST00000310421 CALML4Q96GE6 196 aa13.1□□□□□ -0.31
VCPIP1-201ENST00000310421 SPDYE4A6NLX3 237 aa13.1□□□□□ -0.31
VCPIP1-201ENST00000310421 VSIG10Q8N0Z9 540 aa13.1□□□□□ -0.31
VCPIP1-201ENST00000310421 LUZP1Q86V48 1076 aa13.09□□□□□ -0.31
VCPIP1-201ENST00000310421 STK11IPQ8N1F8 1099 aa13.09□□□□□ -0.31
VCPIP1-201ENST00000310421 GOLGA8BA8MQT2 603 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms