RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 LMBRD1Q9NUN5 540 aa18.58■□□□□ 0.56
SPIRE1-201ENST00000309836 CAMTA1Q9Y6Y1 1673 aa18.57■□□□□ 0.56
SPIRE1-201ENST00000309836 PI4KAP2A4QPH2 592 aa18.57■□□□□ 0.56
SPIRE1-201ENST00000309836 SURF6O75683 361 aaKnown RBP18.57■□□□□ 0.56
SPIRE1-201ENST00000309836 ANXA1P04083 346 aa18.57■□□□□ 0.56
SPIRE1-201ENST00000309836 PLEKHO1Q53GL0 409 aaPredicted RBP18.57■□□□□ 0.56
SPIRE1-201ENST00000309836 MPRIPQ6WCQ1 1025 aa18.57■□□□□ 0.56
SPIRE1-201ENST00000309836 PI4KAP1Q8N8J0 262 aa18.57■□□□□ 0.56
SPIRE1-201ENST00000309836 TMX3Q96JJ7 454 aa18.57■□□□□ 0.56
SPIRE1-201ENST00000309836 IL25Q9H293 177 aa18.57■□□□□ 0.56
SPIRE1-201ENST00000309836 ANO2Q9NQ90 1003 aa18.57■□□□□ 0.56
SPIRE1-201ENST00000309836 DDX49Q9Y6V7 483 aaKnown RBP18.57■□□□□ 0.56
SPIRE1-201ENST00000309836 BTBD11A6QL63 1104 aa18.56■□□□□ 0.56
SPIRE1-201ENST00000309836 RNMTO43148 476 aaKnown RBP18.56■□□□□ 0.56
SPIRE1-201ENST00000309836 MCCP23508 829 aa18.56■□□□□ 0.56
SPIRE1-201ENST00000309836 ANAPC15P60006 121 aa18.56■□□□□ 0.56
SPIRE1-201ENST00000309836 TEFQ10587 303 aa18.56■□□□□ 0.56
SPIRE1-201ENST00000309836 ARHGEF25Q86VW2 580 aa18.56■□□□□ 0.56
SPIRE1-201ENST00000309836 RHPN1Q8TCX5 695 aa18.56■□□□□ 0.56
SPIRE1-201ENST00000309836 PI4K2BQ8TCG2 481 aa18.56■□□□□ 0.56
SPIRE1-201ENST00000309836 TRPM3Q9HCF6 1732 aaPredicted RBP18.55■□□□□ 0.56
SPIRE1-201ENST00000309836 OVOS2A0A0G2JMS6 1433 aa18.55■□□□□ 0.56
SPIRE1-201ENST00000309836 SRGAP3O43295 1099 aa18.55■□□□□ 0.56
SPIRE1-201ENST00000309836 XPCQ01831 940 aaPredicted RBP18.55■□□□□ 0.56
SPIRE1-201ENST00000309836 CUL4AQ13619 759 aa18.55■□□□□ 0.56
SPIRE1-201ENST00000309836 ORAI2Q96SN7 254 aa18.55■□□□□ 0.56
SPIRE1-201ENST00000309836 CRYBG1Q9Y4K1 1723 aa18.55■□□□□ 0.56
SPIRE1-201ENST00000309836 GCP02774 474 aa18.54■□□□□ 0.56
SPIRE1-201ENST00000309836 MCM2P49736 904 aa18.54■□□□□ 0.56
SPIRE1-201ENST00000309836 AMOTQ4VCS5 1084 aa18.54■□□□□ 0.56
SPIRE1-201ENST00000309836 KIF1BPQ96EK5 621 aa18.54■□□□□ 0.56
SPIRE1-201ENST00000309836 SIPA1L3O60292 1781 aaPredicted RBP18.54■□□□□ 0.56
SPIRE1-201ENST00000309836 NPHP4O75161 1426 aaPredicted RBP18.53■□□□□ 0.56
SPIRE1-201ENST00000309836 MAP4K4O95819 1239 aaPredicted RBP18.53■□□□□ 0.56
SPIRE1-201ENST00000309836 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.53■□□□□ 0.56
SPIRE1-201ENST00000309836 HEG1Q9ULI3 1381 aa18.53■□□□□ 0.56
SPIRE1-201ENST00000309836 PROSER3Q2NL68 480 aa18.52■□□□□ 0.56
SPIRE1-201ENST00000309836 ANKRD24Q8TF21 1146 aa18.52■□□□□ 0.56
SPIRE1-201ENST00000309836 CHMP4AQ9BY43 222 aa18.52■□□□□ 0.56
SPIRE1-201ENST00000309836 ADAMTSL3P82987 1691 aa18.52■□□□□ 0.56
SPIRE1-201ENST00000309836 PLEKHG5O94827 1062 aa18.52■□□□□ 0.55
SPIRE1-201ENST00000309836 CHAMP1Q96JM3 812 aa18.52■□□□□ 0.55
SPIRE1-201ENST00000309836 USP42Q9H9J4 1324 aaKnown RBP18.51■□□□□ 0.55
SPIRE1-201ENST00000309836 ADAMTS7Q9UKP4 1686 aa18.51■□□□□ 0.55
SPIRE1-201ENST00000309836 C1orf141Q5JVX7 400 aa18.51■□□□□ 0.55
SPIRE1-201ENST00000309836 EPB41L2O43491 1005 aaKnown RBP18.5■□□□□ 0.55
SPIRE1-201ENST00000309836 GIGYF1O75420 1035 aaPredicted RBP18.5■□□□□ 0.55
SPIRE1-201ENST00000309836 TRHP20396 242 aaPredicted RBP18.5■□□□□ 0.55
SPIRE1-201ENST00000309836 HSPA4P34932 840 aa18.5■□□□□ 0.55
SPIRE1-201ENST00000309836 ZNF445P59923 1031 aa18.5■□□□□ 0.55
SPIRE1-201ENST00000309836 DBF4Q9UBU7 674 aaPredicted RBP18.5■□□□□ 0.55
SPIRE1-201ENST00000309836 PRAMEF22A3QJZ6 481 aa18.5■□□□□ 0.55
SPIRE1-201ENST00000309836 MTX1Q13505 466 aa18.5■□□□□ 0.55
SPIRE1-201ENST00000309836 NOL8Q76FK4 1167 aaKnown RBP18.5■□□□□ 0.55
SPIRE1-201ENST00000309836 SGSM2O43147 1006 aa18.49■□□□□ 0.55
SPIRE1-201ENST00000309836 PRPF40AO75400 957 aaKnown RBP18.49■□□□□ 0.55
SPIRE1-201ENST00000309836 CAVIN1Q6NZI2 390 aaKnown RBP18.49■□□□□ 0.55
SPIRE1-201ENST00000309836 GPT2Q8TD30 523 aa18.49■□□□□ 0.55
SPIRE1-201ENST00000309836 UPF3BQ9BZI7 483 aaKnown RBP18.49■□□□□ 0.55
SPIRE1-201ENST00000309836 AXIN2Q9Y2T1 843 aa18.49■□□□□ 0.55
SPIRE1-201ENST00000309836 MAP3K2Q9Y2U5 619 aa18.49■□□□□ 0.55
SPIRE1-201ENST00000309836 LMTK3Q96Q04 1460 aa18.49■□□□□ 0.55
SPIRE1-201ENST00000309836 ALDH1L1O75891 902 aa18.48■□□□□ 0.55
SPIRE1-201ENST00000309836 BRD1O95696 1058 aa18.48■□□□□ 0.55
SPIRE1-201ENST00000309836 NCLP19338 710 aaKnown RBP18.48■□□□□ 0.55
SPIRE1-201ENST00000309836 ZSCAN23Q3MJ62 389 aa18.48■□□□□ 0.55
SPIRE1-201ENST00000309836 FOXD4L5Q5VV16 416 aaPredicted RBP18.48■□□□□ 0.55
SPIRE1-201ENST00000309836 FOXD4L4Q8WXT5 416 aaPredicted RBP18.48■□□□□ 0.55
SPIRE1-201ENST00000309836 RAD50Q92878 1312 aa18.48■□□□□ 0.55
SPIRE1-201ENST00000309836 RGPD5Q99666 1765 aa18.48■□□□□ 0.55
SPIRE1-201ENST00000309836 HSP90AB4PQ58FF6 505 aa18.48■□□□□ 0.55
SPIRE1-201ENST00000309836 INTS4Q96HW7 963 aaKnown RBP18.48■□□□□ 0.55
SPIRE1-201ENST00000309836 LSG1Q9H089 658 aaKnown RBP18.48■□□□□ 0.55
SPIRE1-201ENST00000309836 KSR2Q6VAB6 950 aa18.47■□□□□ 0.55
SPIRE1-201ENST00000309836 ERBB4Q15303 1308 aa18.47■□□□□ 0.55
SPIRE1-201ENST00000309836 CLCN1P35523 988 aa18.46■□□□□ 0.55
SPIRE1-201ENST00000309836 LMOD2Q6P5Q4 547 aa18.46■□□□□ 0.55
SPIRE1-201ENST00000309836 CNTROBQ8N137 903 aa18.46■□□□□ 0.55
SPIRE1-201ENST00000309836 RBM27Q9P2N5 1060 aaKnown RBP18.46■□□□□ 0.55
SPIRE1-201ENST00000309836 KIF1AQ12756 1690 aa18.45■□□□□ 0.54
SPIRE1-201ENST00000309836 TTC41PQ6P2S7 1318 aa18.45■□□□□ 0.54
SPIRE1-201ENST00000309836 NASPP49321 788 aaPredicted RBP18.45■□□□□ 0.54
SPIRE1-201ENST00000309836 CWF19L2Q2TBE0 894 aaKnown RBP18.45■□□□□ 0.54
SPIRE1-201ENST00000309836 KRT28Q7Z3Y7 464 aa18.45■□□□□ 0.54
SPIRE1-201ENST00000309836 SNX14Q9Y5W7 946 aa18.45■□□□□ 0.54
SPIRE1-201ENST00000309836 OS9Q13438 667 aaPredicted RBP18.44■□□□□ 0.54
SPIRE1-201ENST00000309836 C9orf78Q9NZ63 289 aaPredicted RBP18.44■□□□□ 0.54
SPIRE1-201ENST00000309836 PA2G4Q9UQ80 394 aaKnown RBP18.44■□□□□ 0.54
SPIRE1-201ENST00000309836 C1orf167Q5SNV9 1468 aa18.44■□□□□ 0.54
SPIRE1-201ENST00000309836 ALS2Q96Q42 1657 aa18.44■□□□□ 0.54
SPIRE1-201ENST00000309836 MST1RQ04912 1400 aa18.44■□□□□ 0.54
SPIRE1-201ENST00000309836 PPP1R9BQ96SB3 815 aa18.43■□□□□ 0.54
SPIRE1-201ENST00000309836 NSFL1CQ9UNZ2 370 aaKnown RBP18.43■□□□□ 0.54
SPIRE1-201ENST00000309836 C5P01031 1676 aa18.43■□□□□ 0.54
SPIRE1-201ENST00000309836 GLRX3O76003 335 aaKnown RBP18.43■□□□□ 0.54
SPIRE1-201ENST00000309836 RASEFQ8IZ41 740 aa18.43■□□□□ 0.54
SPIRE1-201ENST00000309836 HYPKQ9NX55 129 aa18.43■□□□□ 0.54
SPIRE1-201ENST00000309836 ESPNB1AK53 854 aa18.42■□□□□ 0.54
SPIRE1-201ENST00000309836 CCDC173Q0VFZ6 552 aa18.42■□□□□ 0.54
SPIRE1-201ENST00000309836 PDIA6Q15084 440 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms