RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 IQGAP1P46940 1657 aa15.44■□□□□ 0.06
TRIM35-201ENST00000305364 CFAP65Q6ZU64 1925 aaKnown RBP15.44■□□□□ 0.06
TRIM35-201ENST00000305364 CUL4AQ13619 759 aa15.44■□□□□ 0.06
TRIM35-201ENST00000305364 CCAR2Q8N163 923 aaKnown RBP15.44■□□□□ 0.06
TRIM35-201ENST00000305364 MNS1Q8NEH6 495 aa15.44■□□□□ 0.06
TRIM35-201ENST00000305364 SMTNL1A8MU46 457 aa15.44■□□□□ 0.06
TRIM35-201ENST00000305364 KIAA1524Q8TCG1 905 aa15.44■□□□□ 0.06
TRIM35-201ENST00000305364 PSMA5P28066 241 aa15.43■□□□□ 0.06
TRIM35-201ENST00000305364 C9orf78Q9NZ63 289 aaPredicted RBP15.43■□□□□ 0.06
TRIM35-201ENST00000305364 CLTCL1P53675 1640 aa15.43■□□□□ 0.06
TRIM35-201ENST00000305364 HSP90AB4PQ58FF6 505 aa15.43■□□□□ 0.06
TRIM35-201ENST00000305364 G2E3Q7L622 706 aa15.43■□□□□ 0.06
TRIM35-201ENST00000305364 SDF4Q9BRK5 362 aa15.43■□□□□ 0.06
TRIM35-201ENST00000305364 PPP6R1Q9UPN7 881 aa15.43■□□□□ 0.06
TRIM35-201ENST00000305364 LRMPQ12912 555 aa15.43■□□□□ 0.06
TRIM35-201ENST00000305364 ARGLU1Q9NWB6 273 aaPredicted RBP15.43■□□□□ 0.06
TRIM35-201ENST00000305364 RTL1A6NKG5 1358 aa15.42■□□□□ 0.06
TRIM35-201ENST00000305364 FAM173BQ6P4H8 233 aa15.42■□□□□ 0.06
TRIM35-201ENST00000305364 SCAND2PQ9GZW5 306 aaPredicted RBP15.42■□□□□ 0.06
TRIM35-201ENST00000305364 RNF17Q9BXT8 1623 aaKnown RBP15.42■□□□□ 0.06
TRIM35-201ENST00000305364 KIF18AQ8NI77 898 aa15.42■□□□□ 0.06
TRIM35-201ENST00000305364 SH2B1Q9NRF2 756 aaPredicted RBP15.42■□□□□ 0.06
TRIM35-201ENST00000305364 KINO60870 393 aaKnown RBP15.42■□□□□ 0.06
TRIM35-201ENST00000305364 RAB11FIP3O75154 756 aa15.42■□□□□ 0.06
TRIM35-201ENST00000305364 ZNF710Q8N1W2 664 aa15.42■□□□□ 0.06
TRIM35-201ENST00000305364 DNAJC25Q9H1X3 360 aa15.42■□□□□ 0.06
TRIM35-201ENST00000305364 CDC42BPBQ9Y5S2 1711 aa15.42■□□□□ 0.06
TRIM35-201ENST00000305364 FLIIQ13045 1269 aa15.41■□□□□ 0.06
TRIM35-201ENST00000305364 SMC2O95347 1197 aa15.41■□□□□ 0.06
TRIM35-201ENST00000305364 FANCAO15360 1455 aa15.41■□□□□ 0.06
TRIM35-201ENST00000305364 BLOC1S2Q6QNY1 142 aa15.41■□□□□ 0.06
TRIM35-201ENST00000305364 TCEANC2Q96MN5 208 aa15.41■□□□□ 0.06
TRIM35-201ENST00000305364 CFAP74Q9C0B2 1584 aa15.4■□□□□ 0.06
TRIM35-201ENST00000305364 DDX19AQ9NUU7 478 aaKnown RBP15.4■□□□□ 0.06
TRIM35-201ENST00000305364 CCDC9Q9Y3X0 531 aaKnown RBP15.4■□□□□ 0.06
TRIM35-201ENST00000305364 KIF1BPQ96EK5 621 aa15.4■□□□□ 0.06
TRIM35-201ENST00000305364 SLC52A1Q9NWF4 448 aa15.4■□□□□ 0.06
TRIM35-201ENST00000305364 PTCH1Q13635 1447 aa15.4■□□□□ 0.06
TRIM35-201ENST00000305364 MYOM2P54296 1465 aa15.4■□□□□ 0.06
TRIM35-201ENST00000305364 VGLL3A8MV65 326 aa15.4■□□□□ 0.06
TRIM35-201ENST00000305364 RAPGEF3O95398 923 aa15.4■□□□□ 0.06
TRIM35-201ENST00000305364 HDGFL1Q5TGJ6 251 aa15.4■□□□□ 0.06
TRIM35-201ENST00000305364 TXNDC2Q86VQ3 553 aa15.4■□□□□ 0.06
TRIM35-201ENST00000305364 FSD1Q9BTV5 496 aa15.4■□□□□ 0.06
TRIM35-201ENST00000305364 RIMS2Q9UQ26 1411 aa15.4■□□□□ 0.06
TRIM35-201ENST00000305364 IL13P35225 146 aa15.39■□□□□ 0.05
TRIM35-201ENST00000305364 DDX11Q96FC9 970 aa15.39■□□□□ 0.05
TRIM35-201ENST00000305364 TIGD1Q96MW7 591 aa15.39■□□□□ 0.05
TRIM35-201ENST00000305364 CALCOCO1Q9P1Z2 691 aa15.39■□□□□ 0.05
TRIM35-201ENST00000305364 PNMA6EA0A0J9YXQ4 647 aa15.39■□□□□ 0.05
TRIM35-201ENST00000305364 SKILP12757 684 aa15.39■□□□□ 0.05
TRIM35-201ENST00000305364 ATP8B2P98198 1209 aa15.39■□□□□ 0.05
TRIM35-201ENST00000305364 GPS2Q13227 327 aa15.39■□□□□ 0.05
TRIM35-201ENST00000305364 SNX14Q9Y5W7 946 aa15.39■□□□□ 0.05
TRIM35-201ENST00000305364 PPP1R42Q7Z4L9 355 aa15.38■□□□□ 0.05
TRIM35-201ENST00000305364 NAT10Q9H0A0 1025 aaKnown RBP15.38■□□□□ 0.05
TRIM35-201ENST00000305364 CEP152O94986 1710 aa15.38■□□□□ 0.05
TRIM35-201ENST00000305364 ZFYVE9O95405 1425 aa15.38■□□□□ 0.05
TRIM35-201ENST00000305364 PDE4CQ08493 712 aa15.38■□□□□ 0.05
TRIM35-201ENST00000305364 UNC5CLQ8IV45 518 aa15.38■□□□□ 0.05
TRIM35-201ENST00000305364 MAP3K4Q9Y6R4 1608 aa15.37■□□□□ 0.05
TRIM35-201ENST00000305364 GLRX3O76003 335 aaKnown RBP15.37■□□□□ 0.05
TRIM35-201ENST00000305364 HSPA4P34932 840 aa15.37■□□□□ 0.05
TRIM35-201ENST00000305364 GABPB1Q06547 395 aaPredicted RBP15.37■□□□□ 0.05
TRIM35-201ENST00000305364 POLR3GO15318 223 aaPredicted RBP15.37■□□□□ 0.05
TRIM35-201ENST00000305364 ZNF397Q8NF99 534 aaPredicted RBP15.37■□□□□ 0.05
TRIM35-201ENST00000305364 RHPN1Q8TCX5 695 aa15.37■□□□□ 0.05
TRIM35-201ENST00000305364 CBX8Q9HC52 389 aa15.37■□□□□ 0.05
TRIM35-201ENST00000305364 GTF2F1P35269 517 aaKnown RBP eCLIP15.37■□□□□ 0.05
TRIM35-201ENST00000305364 G3BP1Q13283 466 aaKnown RBP eCLIP15.37■□□□□ 0.05
TRIM35-201ENST00000305364 NUDT16Q96DE0 195 aaKnown RBP15.37■□□□□ 0.05
TRIM35-201ENST00000305364 NRBP1Q9UHY1 535 aa15.37■□□□□ 0.05
TRIM35-201ENST00000305364 KIF24Q5T7B8 1368 aa15.37■□□□□ 0.05
TRIM35-201ENST00000305364 RGS12O14924 1447 aa15.36■□□□□ 0.05
TRIM35-201ENST00000305364 FAM177A1Q8N128 213 aaPredicted RBP15.36■□□□□ 0.05
TRIM35-201ENST00000305364 NOL10Q9BSC4 688 aaKnown RBP15.36■□□□□ 0.05
TRIM35-201ENST00000305364 SPTLC3Q9NUV7 552 aa15.36■□□□□ 0.05
TRIM35-201ENST00000305364 ZNF853P0CG23 659 aa15.36■□□□□ 0.05
TRIM35-201ENST00000305364 ME1P48163 572 aa15.36■□□□□ 0.05
TRIM35-201ENST00000305364 ANKRD1Q15327 319 aa15.36■□□□□ 0.05
TRIM35-201ENST00000305364 UBXN4Q92575 508 aa15.36■□□□□ 0.05
TRIM35-201ENST00000305364 OSBPL3Q9H4L5 887 aa15.35■□□□□ 0.05
TRIM35-201ENST00000305364 HDAC5Q9UQL6 1122 aa15.35■□□□□ 0.05
TRIM35-201ENST00000305364 CEP57L1Q8IYX8 460 aa15.35■□□□□ 0.05
TRIM35-201ENST00000305364 CCDC61Q9Y6R9 512 aa15.35■□□□□ 0.05
TRIM35-201ENST00000305364 NAA30Q147X3 362 aaPredicted RBP15.35■□□□□ 0.05
TRIM35-201ENST00000305364 CFAP45Q9UL16 551 aa15.35■□□□□ 0.05
TRIM35-201ENST00000305364 CCDC171Q6TFL3 1326 aa15.35■□□□□ 0.05
TRIM35-201ENST00000305364 LIG1P18858 919 aa15.35■□□□□ 0.05
TRIM35-201ENST00000305364 AACSQ86V21 672 aa15.35■□□□□ 0.05
TRIM35-201ENST00000305364 SPHKAPQ2M3C7 1700 aa15.34■□□□□ 0.05
TRIM35-201ENST00000305364 ABCA6Q8N139 1617 aa15.34■□□□□ 0.05
TRIM35-201ENST00000305364 CHL1O00533 1208 aa15.34■□□□□ 0.05
TRIM35-201ENST00000305364 CSB-PGBD3P0DP91 1061 aa15.34■□□□□ 0.05
TRIM35-201ENST00000305364 ZNF75DP51815 510 aa15.34■□□□□ 0.05
TRIM35-201ENST00000305364 ZSCAN25Q6NSZ9 544 aa15.34■□□□□ 0.05
TRIM35-201ENST00000305364 MYOM1P52179 1685 aa15.34■□□□□ 0.05
TRIM35-201ENST00000305364 NEMFO60524 1076 aa15.34■□□□□ 0.05
TRIM35-201ENST00000305364 RUFY3Q7L099 469 aa15.34■□□□□ 0.05
TRIM35-201ENST00000305364 SGSM2O43147 1006 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms